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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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               ----------------->AG
               ----------------->AGL1
               =============================================================================MADS_MADS
       --------->MYB46(3)
      --------->ANAC46
      --------->ANAC58                                                      <---------------AGL15
      --------->ANAC58                                                     <-----------------AGL1
     ------>MYB83  --------->DAG2                                      <---------ANAC58
     ------>MYB46(1)                                                   <---------ANAC58      <------
    <---------ALFIN1                                               <----------DOF2           <------
   --------->MYB46(3)    --------->ZAT18                       ---------->ID1         ------->TEIL
--------TaNAC69(2)---------->DOF2                             <-----------GT1      <---------YAB1
 
gcaaaacccacccaatttcccaaaagtgttcacaaatgttcttaccacaaatactactccatatttttctctttgcttccccatttatgaaactcacttt  18583300
                        --------->ALFIN1       <---------TOE2(3)
                      --------->ANAC55(2)     --------->YAB1
            <---------AHL20(2)               <---------ATHB12        --------->AtMYB61
            --------->AHL20(2)       <---------ZAT18   <---------ANAC58
            --------->AHL20(1)       --------->ZAT14   <---------ANAC58
----DOF2    <---------AHL20(1)      <---------ZAT6<---------------AtSPL8   --------->ATHB12
---DAG2  --------->YAB1 <-----------RAV1(1)  <---------ATHB51  --------->ANAC46
 
atagttatcccataataaattagtcatgtgttgctcttagtgttctcaataatgtagtacttgcatccgaaaccaaaactattggaagtttagaagtaga  18583400
                                                          --------->ATHB12
                                                          --------->ATHB51                       ---
                                                          <---------ICU4                       <----
                                                     <---------ARR11(3)                      <------
                                                     --------->ARR11(3)                     --------
                                                 <---------AHL20(2)                        ---------
                                         --------->YAB1--------->YAB1                     <---------LBD16
                                        --------->ICU4<---------YAB1                   --------->KAN4(2)
                          --------->MYB52(1)     --------->AHL20(2)<----------DOF2    --------->KAN4(1)
             <----------ID1 <---------ATHB12    --------->AHL20(2)<----------DOF2     <----------TaMYB80
             --------->ANAC58           <---------ATHB12 --------->ICU4               <---------KAN4(1)
             --------->ANAC58         --------->WOX13(1) <---------YAB1              <---------KAN4(2)
 
acatagaacttagaagaagccaaaaaaaccaatggttttgtcaattatcaaattaatatcattattgggcctttatggcccattagtgaatattccggta  18583500
         --------->ZAT6                                          --------->MYB52(1)
        <---------ZAT18                                         <----------ID1
--------->YAB1                                                --------->ANAC58
------>TOE2(3)                                                --------->ANAC58
---TEIL <---------ZAT14                                     ---------->DOF2
---MYB52(1)  --------->ZAT14                             --------->ANAC58            <<<<<<<<<<<<<<<
->LBD16 --------->ZAT14                                  --------->ANAC58        ---------->DOF2 ---
------>AtSPL8<---------ZAT14                    --------->WRKY18(1)     --------->ATHB12    <-------
 
cattaatactgagcactacaatggaagaaaatgaccatggctatgttgaaggtcaaactcaaggaaagcaacgaattagtggaataaagcccattgggcc  18583600
                                                                           <---------GLK1(2)
                                                                           <---------ARR11(3)
                                                                           --------->ARR14(2)
                                                                           --------->ARR11(1)
                                                  --------->LBD16          <---------ARR14(2)
                                                  <------NtERF2            --------->ARR11(3)
                     <------NtERF2                <---------At4g35610  =============================
--------->TOE1(2)    <---------HSFB2a(2)          --------->At4g35610  ---------->DOF2
--------->TOE2(2)  <---------ANAC46        --------->ZAT14           --------->ANAC58
<<LFY             <------NtERF2            <---------ZAT14           --------->ANAC58
------>MYB52(1)  <---------ZAT18      --------->WRKY38(1)      --------->AHL20(2)
---ID1          <---------RAP2.6(2)<---------MYB46(3)        --------->TOE2(3) ----------->GT1
 
aaacgtatgagaaaaaatggtggcctcgaaggtgagagttgttgactacagtccgcagaaaaaacattaaaaacgaaagatactgaaaaaaaaaaaaaaa  18583700
                                        --------->TOE1(3)                                          -
           ----------->HVH21            --------->TOE2(3)                                     <-----
         --------->ALFIN1              --------->HSFB2a(1)                                    ------
       <---------ANAC46               ------->TEIL            <<<<<<<<<<<<<<<<<LFY      <---------DEAR3(1)
     <---------ANAC58                 <-----------ARR10    --------->ANAC58            <---------LBD16
     <---------ANAC46              <---------MYB59         --------->ANAC46         --------->ATERF1(1)
     <---------ANAC58           --------->MYB52(1)         --------->ANAC58      <---------MYB52(1)-
--------->O2            --------->ANAC58<---------MYB59  ----------->RAV1(1)    <-----------HVH21  -
--------->TGA1a    ----------->HVH21 ------>MYB46(1)     ------->GAMYB     --------->ZAT2--------->LBD16
<---------O2      *TSS  --------->ANAC58<---------DAG2   --------->AtMYB61 <---------ZAT2------>NtERF2
===========================================MYC_MYB      --------->MYB46(3)--------->ANAC58   <------NtERF2
<---------TGA1a   --------->At5g28300------>MYB83  --------->ANAC46       --------->ANAC58<---------LBD16
==========bZIP_DOF<-----------HVH21------->GAMYB--------->ARR14(2)   <----------ID1<---------ATERF1(1)
 
ctcacgagtcgtgtgtgactcggtgactcgcgactcaaccgaaccttacccaatactcaaccacacaacaatgggccaagctccgtcgtctccggcggaa  18583800
           <---------HSFC1(2)
       --------->ANAC46
     --------->ANAC58
     --------->ANAC46
     --------->ANAC58
    <-------TEIL                                                                                 ---
    --------->SPL7                          --------->ATHB12                                    <---
    ------->TEIL                          --------->HSFB2a(2)                                <------
  --------->TOE1(2)                 --------->ARR14(2)                                       <------
  <---------SPL7                    <---------GLK1(2)                                    --------->At5g28300
  --------->TOE2(2)               --------->LBD16          <------MYB46(1)             --------->ANAC58
--------------->AtSPL3          --------->At4g35610        <------MYB83                --------->ANAC46
-------->MYB52(1)               <---------LBD16        --------->ATHB12                --------->ANAC58
----ARR14(2)                  <---------WRKY38(1)   <---------ARR14(2)                <---------At5g28300
--->ARR14(2)                <-----------HVH21       --------->GLK1(2)                 <---------LBD16
----->MYB46(1)  <----------DOF2--------->MYB52(1)<---------ANAC58                  <-----------HVH21
----->MYB83--------->HSFC1(2) <---------WRKY12   <---------ANAC58              <---------YAB1-------
 
ccaaacgtacgcgatacttctttatgtctatggtcaccggaatttctcgattgcgaatcgattggtttcgaagacggagattacgatttcacggcaaatc  18583900
                                                 <---------ARR14(2)
                                                 --------->ARR14(2)
                                              ------>ZmHOX2a(2)
                                             <------ZmHOX2a(2)
                                            <---------ARR14(2)
                                            --------->ARR14(2)                         --------->ETT(2)
    --------->ATHB12                       <---------GLK1(1)                  <------NtERF2
----->P               <----------DOF2      --------->GLK1(1)                 <---------MYB46(3)   --
--------GT1        --------->ARR11(3)    <------NtERF2                       ------>NtERF2        --
---ARR14(2)        <---------ARR11(1)   --------->LBD16                     <---------DEAR3(1)   <--
-----ARR10         <---------ARR11(3)  <---------ANAC46                --------->MYB52(1)  ---------
-->ARR14(2)       <---------CCA1(2)   <---------LBD16            <---------CCA1(2)     <---------WRKY38(1)
 
taccagacgattgcctcgctcatatctttcaatttctcagtgccggagatcggaaacgatgctctcttgtatccaaacggtggctattagtcgacggaca  18584000
                                                      <---------ARR14(2)             <---------ZAT18
             <-----------GT1                          ------->TEIL                 --------->ZAT2
 <-----------HVH21                            <-----------GT1              --------->LBD16
 <-----------TGA1                           <---------ANAC58              --------->ANAC55(2)
--------->YAB1                              <---------ANAC58              <---------ANAC58
------->ARR14(2) ----------->HVH21       <----------DOF2      <---------ATHB12  ---------->DOF2
------->GLK1(2)--------->ANAC55(2)  <-----------GT1   --------->ARR11(3)  <---------ANAC58
-------GLK1(2) <---------ANAC55(2)--------->GLK1(2)   --------->ARR14(2)  <---------ANAC55(2)     <-
-->HVH21<---------MYB52(1)       <---------GLK1(2)   <---------CCA1(2)    ----------->GT1<----------DOF2
 
gaatcgtcaccgtttatcacttgacgctaaatctgagattctccctttcttaccatgtatcttcaatcgattcgattccgtaacaaagctcgctcttcgt  18584100
               <---------At4g35610
          <----------DOF2
         ------>ZmHOX2a(2)
        <---------RVE1(1)                                   --------->ARR14(2)
        <------ZmHOX2a(2)                                   <---------ARR14(2)
       --------->ARR14(3)                                   --------->GLK1(2)
       <---------ARR14(3)                                   ------->TEIL                 --------->ETT(2)
       --------->ARR11(3)                                  <---------CCA1(2)          <---------MYB46(3)
       <---------ARR14(2)                              <---------ANAC46             <-------GAMYB
       <---------ARR11(3)                              <---------ANAC58            <---------MYB46(3)
       --------->ARR14(2)                              <---------ANAC58         <---------ANAC46
      --------->GLK1(1)                           <---------MYB46(3)       --------->ANAC58
      <---------GLK1(1)        <----------DOF2    --------->MYB52(2)       --------->ANAC58
  ------>ZmHOX2a(2)         ------->TEIL         <-------TEIL  <---------YAB1  <-------TEIL
--------YAB1   --------->At4g35610   --------->YAB1 <---------MYB52(1)  --------->WRKY18(1)      ---
 
tgtgatcggagatcttttagcttaagcgatgaagctttattcatagtctcgattcgttgctcgaatctgattcgagtcaagcttcgtggttgtcgagaga  18584200
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AGI:  At3g50080.1   
Description:  VFB2 (VIER F-BOX PROTEINE 2); ubiquitin-protein ligase. Identical to F-box/LRR-repeat protein 16 (FBL16) [Arabidopsis Thaliana] (GB:Q9SN10); similar to SKIP2 (SKP1 INTERACTING PARTNER 2), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT5G67250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71916.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553)
Range:  from: 18583719    to: 18585497    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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