Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ARR11(3)                   --------->WRKY45   --------->At4g35610           --------->ARR14(2)                                                 -  <---------ARR14(2)             <---------ARR14(2)                           ------>ZmHOX2a(1)     -  --------->GLK1(2)--------->WRKY38(1)                                 <---------ANAC58             -  --------->ARR14(2)             --------->ARR11(3)                    <---------ANAC58           --- <---------GLK1(1) --------->ZAT18                          --------->At4g35610  <---------ZAT14  --- -----ANAC46       --------->WRKY12          ----------->GT1<---------At4g35610  --------->ZAT14  <-- -DOF2          <---------ZAT6   --------->GLK1(2)--------->ZAT6 --------->GLK1(2)                <--   tgggaatctgaatccctagagttgactagagagagtatctcttggatgagtaacactagctcatcagactctggcttctcctctgtagtcaaatccattg  18550200                                                                                                  ---                                                                                                 <---                                         --------->LBD16                                         ----                                        <---------ANAC58                                        -----                                    <---------ANAC58                                           ------                                    <---------ANAC58                                           <----- ---------->HVH21              <---------ANAC46                                               ------- -------->WRKY12               <---------bZIP60(2)                                            ------- -------->WRKY38(1)          <---------ZAT14                                                  <------ ------>ZAT2                --------->ALFIN1                     ----------->GT1             <------- ------>At4g35610     ---------->DOF2   <---------ANAC58  ---------->DOF2                    -------- -------At4g35610 <-----------GT1<---------RAP2.6(2)  <---------ZAT6--------->AHL20(2)      --------- -------ZAT2   <---------YAB1--------->ZAT14   ---------->DOF2  ----------->GT1      ----------->HVH21   agctgaccagagagattattttaccaaagagtgttgtggcttccgagtccaaagcagagttaaagagagataaattttgaaaaaccattgacatgagatc  18550300  <---------ZAT14  <---------At4g35610 -------->RAV1(1) ------ETT(1) ------->HVH21 ->ZmHOX2a(2)                                                                                   <---- --->CCA1(2)                                                                                <------NtERF2 -ZmHOX2a(2)                                                                              <---------DEAR3(1) -->AGP1                                                                                 <---------ZAT2 -->ARR14(2)                                      <---------ANAC58                       --------->At4g35610 ---ARR14(2)                                      <---------ANAC46                ------>NtERF2 ----- --GLK1(1)                                        <---------ANAC58                --------->LBD16 ->GLK1(1)              --------->ARR14(2)  --------->ARR11(3)         ------->TEIL      <---------At4g35610 -->ARR10               <---------ARR14(2)  <---------ARR11(3) ----------->HVH21<---------LBD16 -----   cgacagcagtttggactgagactccaaatccatagagttgaagagagatattgcttgagtagtgagtgacatgaactctgactccggcttcggctgcgaa  18550400           --------->ZAT2                   <---------ANAC58           --------->At4g35610      --------->ANAC58           <---------At4g35610      --------->ANAC58           <---------ZAT2       <------MYB46(1)  --------->ARR14(2)            <------MYB83<---------ANAC46  <---------ARR14(2)            <---------HSFB2a(2)                                             ----- -----ARR14(2)                 --------->MYB59                                      --------->MYB52(2) ---->ARR14(2)                 --------->MYB46(2)                 <---------------AtSPL8       <----- ---->GLK1(2)          <------ZmHOX2a(1)    <---------ANAC58     ---------->DOF2 --------->TOE2(3)<--   tccaaatccattgagctgactagaaggattagttcggtaagcaatggagtggcatcccagtacaagttaaagtactcgacaaacattagttgagtaagga  18550500                                 ------>ZmHOX2a(2)                                 <-------TEIL                                <------ZmHOX2a(2)                               <---------ARR14(2)                               --------->ARR14(2)                           ------>ZmHOX2a(2)                           <---------LBD16                     <---------LBD16                   <---------ARR14(2)          --------->DEAR3(1) --------->LBD16                                           --------->ARR11(3)      <---------GLK1(1)   <------ZmHOX2a(2)                                            <---------GLK1(2)      --------->GLK1(1)--------->LBD16                                                 <---------ARR11(3)      --------->At4g35610<---------ARR14(2)                                           <---------RVE1(1) ------>GT1------>NtERF2 --------->ARR14(2)    ------>NtERF2                        *TSS          <-- -ZmHOX2a(1)       --------->GLK1(2)<XXXXXXXXXXXXXXXXXXXXMIR2934  ---------->DOF2<---------YAB1 <---- -------ZAT6       --------->ARR14(2)  <---------ZAT6     <----------DOF2----------->GT1      <------   gtgataagagctccgactccgaatccggatccggatccatagtgtttgccgagagaggctctttgagtaaaagttttgttaatatgagagatttttgagg  18550600            <---------At4g35610          <---------RAP2.6(2)          <---------DEAR3(1)         --------->RAP2.6(3)      --------->MYB59                                                                    <---------AHL20(2) ------->TEIL                                                <----------DOF2             --------->AHL20(2) -------YAB1<------NtERF2 --------->YAB1               <----------DOF2          ----------->GT1 --ZmHOX2a(1)          <----------DOF2                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---TOE2(3)<---------DEAR3(2)   <-----------GT1------------>CBF           <---------ZAT6--------->AHL20(2)   atgaatgtaaggtcggcttatgcaactttcatattttcttcataaacaaaacaatagctttgacttttgatgcctagtgggagagtgaaatttaaaaata  18550700                                                                                          --------->AHL20(1)             ------->GAMYB                                                                --------->AHL20(2)            --------->ANAC58                 <---------AHL20(2)                   <---------DAG2            --------->ANAC58        --------->ANAC58                              <----------DOF2          --------->MYB52(1)        --------->ANAC58                    --------->ANAC46  <---------AHL20(1)       --------->ANAC58            <---------------AtSPL8           <-----------GT1       <---------ARR11(3)       --------->ANAC58       <---------AHL20(2)             ---------->DOF2   <-----------GT1 <-----      --------->MYB59     --------->AHL20(2) --------->AHL20(2)  <---------ICU4<---------AHL20(2)----   ctggcaagtaggcaacgaaaacaaacatatatataaacaagtaccaattttttgtatttgtataaaagaattaccagctattaacttttctatatattaa  18550800              ------>MYB83                                                    --------->ANAC58              ------>MYB46(1)                                                 --------->ANAC58         <------ZmHOX2a(1)                                         ----------->GT1       --------->MYB59                                      --------->YAB1    --------->ANAC46  <---- ------GT1  <---------MYB59                    <---------TOE2(3)   --------->YAB1      <-----------GT1 ----->MYB46(3)                        <-------TEIL     <---------AHL20(2)--------->AtLEC2<----------DOF2   caactagattaggacctatctaaatacacctgtataagaaatacatgttaagttttattcaattgtaaatggtaacatgcacacaagtttttctttataa  18550900                                                           --------->AHL20(1)                                                           <---------AHL20(1)                                                           <---------AHL20(2)                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                          --------->YAB1                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                      --------->AHL20(1)                                                      <---------AHL20(1)                           --                                                --------->YAB1                             <---------MYB46(3)                                               <---------YAB1               <---------ZAT18----------                                 <-----------GT1<---------ICU4<---------AHL20(2) <---------AHL20(2)<-       <-----------GT1          --------->AHL20(2) --------->YAB1        <---------ANAC46 <---------ATHB12 -------GT1                    --------->AHL20(2) <---------YAB1<---------AHL20(2)   --------->TOE2(3)   accggttttgaactattcaatcttacaaaacaatttaactatctatctcatcataataaattatattttttagttttgtgcattttatctcaatggttaa  18551000                                              --------->AHL20(2)   --------->AHL20(1)                                              <---------AHL20(2)   <---------AHL20(1)                                            <---------AHL20(2)  --------->AHL20(2)                                            --------->AHL20(2)  <---------AHL20(2)                                          <---------AHL20(2)  <---------AHL20(2)                                          --------->AHL20(2)  --------->AHL20(2)                                        --------->AHL20(2)  <---------AHL20(2)                                        <---------AHL20(2)  --------->AHL20(2)                                      <---------AHL20(2)  <---------AHL20(2)                                    --------->AHL20(2)    --------->AHL20(2)                                    <---------AHL20(2)  --------->AHL20(2)                                <---------AHL20(2)    --------->AHL20(2)                                --------->AHL20(2)    <---------AHL20(2)                              --------->AHL20(2)  <---------AHL20(2)              --------------->AGL15                <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)            <---------------AGL15          --------->AHL20(2) <---------AHL20(1)   --------->AHL20(2)             <-----------------AGL2 ----------->GT1--------->AHL20(2)<---------AHL20(2)<---------AHL20(2)   <---------MYB52(1) ------->At4g35610           --------->AHL20(1) --------->AHL20(2) --------->ARR11(3)          <----- ->GT1    <---------AHL20(2) <---------ARR11(3) <---------AHL20(2)<---------AHL20(2)           ------ --------At4g35610     <-----------GT1--------->AHL20(2)<---------AHL20(2) --------->MYB52(2)<-------   gagctgaaaaatttatattaaaatgtcacaatatatatatatatatatatatatatatatatatatatatatattgttagttttctattttgagtaagga  18551100  Previous    Next  AGI:  At3g50010.1    Description:  DC1 domain-containing protein. similar to MEE53 (maternal effect embryo arrest 53), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G10560.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02540.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48320.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR0018 Range:  from: 18548166    to: 18550584    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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