Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------MYB46(3) <-----------GT1                    <---------YAB1    <---------TOE2(3)     --------->MYB46(3)               --------->ANAC46  <---------AHL20(2)    <---------ARR14(2)               --------->ANAC46      ----------->GT1  <---- --------->AHL20(2)     --------->ARR14(2)     >>>>>>>>>>MYB80      --------->CCA1(2)       xxxxxxxxx   atatttaatgtaagagagtggtttagtatccaccgattaactcggttcaaaccaaaaatacaccaaaatgatatgactgaattgtgaaatcagtccaaga  18499600                         --------->AtMYB61                     --------->DEAR3(1)           --------->ANAC46            --------->ZAT2                   <---------GLK1(2)            --------->At4g35610         <------ZmHOX2a(1)            <---------ZAT2            <---------TOE2(3)                             <xxxxxxxxxxxxxxxx ---------->DOF2    <------NtERF2   --------->CCA1(2)    --------->TOE2(3) ---------->DOF2 -----ARR11(3)   <------NtERF2     --------->ARR11(3) <---------CCA1(2)  --------->At5g28300 <------- xxxxxxxxxxxxxx>smallRNA(fl3) --------->AtLEC2 <-------TEIL             ----------->GT1   <----------TaMYB80   actaaaagtcgatgagctcggcatcgacctccatgaagataaggaaagattcactcaaatcttaagaaataatacggtaaagaatattagacatattccc  18499700                                    --------->ANAC55(2)                                    <---------ANAC55(2)                                    --------->TOE2(3)                --------->AHL20(1)                                 <---------ARR14(2)                  <---------AHL20(2)                                 --------->ARR14(2)                  <---------AHL20(1)                                 --------->GLK1(2)                   --------->AHL20(2)                                --------->RVE1(1)                   --------->AHL20(2)                         ------>MYB83--------->LBD16                --------->YAB1                         ------>MYB46(1)                           <---------YAB1         <---------YAB1                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------AHL20(1) --------->RVE1(1)                   --------->WRKY12 --------->ANAC46            <---------AHL20(2)--------->ARR11(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                         --------->AHL20(1)--------->GLK1(2) --------->LBD16   --------->WRKY38(1)                          --------->AHL20(2)<---------ARR11(3) xxxxxxxsmallRNA(s2)   <---------MYB59<---------MYB52(1) --------->TOE2(3)       --------->RVE1(1) ----GT1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->TOE1(3)       --------->CCA1(1)   atccgaaaaataagaagctcgatgaccaaacaaaaaatccgtaattctattttcgaaaaccctaaatttattatattactaaaaaatctcttgtaattgt  18499800                                                                                           <---------AHL20(2)                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                       --------->TOE2(3)  --------->AHL20(2)                            ------->TEIL                  <----------DOF2    <---------AHL20(1)                <---------ICU4          --------->ZAT6   <---------ANAC58    <---------AHL20(2)             --------->YAB1<---------CCA1(2)             <---------ANAC58    --------->AHL20(2) -----  --------->ZAT14          <---------GLK1(2)         <----------DOF2  ----------->GT1  --------->AHL20(2)   caagtttactctcaaaaatcatttttcttgaatctcttgtttactctaatttctactttgcttttactcgcattgttaatttaatttcataaattaatcc  18499900                           <---------ATHB51            <---------ANAC58   ---------->DOF2               <---------ARR11(3)            <---------ANAC46--------->YAB1                   --------->ARR11(3)            <---------ANAC58--------->AHL20(2)       --------->ICU4--------->DAG2     --------->At4g35610     <------ZmHOX2a(2)     --------->ICU4       ----------->GT1   ---------->DOF2    ------->TEIL ---->TOE2(3)          ------------>CBF      ------->TEIL  ----------->GT1      ---------->DOF2    <-   ctaatagatcaaatgggtgtatttttgcaattataaagtttaagacgaatttgtaaaaatgaagataataaagggctcccagtaaagcacctcaaaatcg  18500000                         <------MYB46(1)                         <------MYB83                     <---------ANAC58                     <---------ANAC46                     <---------ANAC58                                             ----------->RAV1(1)                    <-------TEIL                                               --------->ANAC58                   *TSS <---------AtMYB61                                      --------->ANAC46                  --------->TOE2(2)                                            --------->ANAC58               ----------->RAV1(1)                                       <-----------HVH21 ------TEIL ------>ZmHOX2a(1)            ---------->DOF2              ------>ZmHOX2a(1)   atacatacttcatcctccaacatgcgtaggtgaatcgaaagattaaaggtcaaatttttgtgtcttctcttcctctgtctcatgccacaatttttagatt  18500100                           <---------ANAC58            --------->ANAC46                    <---------At4g35610            ----------->HVH21   ------>ZmHOX2a(1)         ==============================HOX2a_HOX2a<----------DOF2          ------>ZmHOX2a(1)  <------         ------>ZmHOX2a(2) <---------ANAC58     --------->At4g35610  <<<<<<<<<TBF1   ----------------   tcaaactttgatccatgacactctccatagcttcctctctcattcccttcagctttctcaggcatgtcttcttcttcctcttcttctccttgttaatttc  18500200                                       --------->ARR14(2)                                       <-----------ARR10                                       <---------ARR14(2)                                    <---------ANAC58                                    <---------ANAC58                  <----------DOF2   <---------ANAC46              <---------AHL20(2)     <---------LBD16     <----------DOF2                <---------ANAC58 -----GT1    ---------->DOF2    <---------ANAC58        <---------ANAC46                         <--- ----->WRI1------>ZmHOX2a(2)    <---------ANAC58        <---------ANAC58<---------YAB1           ----   cccatttccctgatcgaaagctttaatctttttctcgtgcgtgtcttcgtaatctctggcgtttctattgaattactaatgcaattgaaaaacttgggga  18500300      ---------->DOF2                                                         <---------ANAC46   --------->YAB1 <----------DOF2                                             <---------ANAC58  <---------YAB1 ------>ZmHOX2a(2)                                            <---------ANAC58 --------------->AGL15                                                    <-------GAMYB <---------------AGL15                --------->ZAT14                    <---------MYB46(3) ------GLK1(1) --------->ARR11(3)     <---------ZAT14                    --------->MYB52(2) ----->GLK1(1) <---------ARR11(3)<---------At4g35610                 --------->ALFIN1   tttcattataaagtattgatctttgtgatgttttcatctgttcacagagaattgaagtcgagacattagaagtgtttgttgtgtgtgtgtgtgtgtttct  18500400                                                      --------->ZAT18                                      <---------At4g35610                                      --------->At4g35610                                      --------->GLK1(1)                                      --------->ZAT2  <---------ZAT18                           <---------ANAC58        <---------ANAC46                           <---------ANAC46   <---------At4g35610                           <---------ANAC58   --------->At4g35610                     <---------AHL20(2)    ---------->DOF2        >>>>>>>>>TBF1                <---------YAB1        <---------GLK1(1)   ----------->RAV1(1) <---------GLK1(2)  --------->AHL20(2)<---------ZAT2 --------->ALFIN1           ---------->DOF2   atagaatttttgaattttgtgataaaattgtgtgaatgggagctccaaagctgaagtggacaccagaagaagaaacagctcttaaagctggagtacttaa  18500500  Previous    Next  AGI:  At3g49850.1    Description:  ATTRB3/TRB3 (TELOMERE REPEAT BINDING FACTOR 1); DNA binding / transcription factor. similar to ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67580.1); similar to ATTRB2/TRB2 (TELOMERE REPEAT BINDING FACTOR 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G67580.2); similar to MYBR6 [Malus x domestica] (GB:AAZ20445.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPr Range:  from: 18500019    to: 18501981    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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