Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->ANAC55(2) ------->ANAC55(2)                                           <-------TEIL --------ANAC46                                      <---------WOX13(1) --------ANAC55(2)                                 <---------ICU4 -----TEIL                                         --------->ATHB12 --->At4g35610                                    --------->ICU4                               ------ ----At4g35610           <---------ATHB12         <---------YAB1                            --------- -->MYB52(2)           --------->MYB52(1)       --------->YAB1<---------ANAC55(2)          ----------   tacgtagtccataacttcaaaaaaccaatggttttgaactcattccatagtgatgattgcaaatacatattatctggtttacaaaaaaaaaaaaaaagtg  18388100                                                                      <----------DOF2                                                              --------->O2                                                              <---------TGA1a                                                              ===================bZIP_DOF                --------->ALFIN1                              <---------O2    --------->REM1(1)     --------->ARR11(3)                                    =============MYC_MYB    --------->AHL20(2)                                     ------->GAMYB      <---------ALFIN1   <---------ATHB12       --------->ICU4                --------->TOE2(2)  <---------ANAC58         < --->ALFIN1   <-----------RAV1(1)                       --------->TOE1(2)  <---------ANAC58         < >DAG2  <---------HSFB2a(2)                   --------->ARR14(2)   <---------ANAC46           ------- >DOF2  --------->HSFB2a(2)                   <---------ARR14(2)  ---------->ID1 <---------DAG2------   ttccaattatctagaaatgttgggcctaatgcttaaacagtaagcccatatacttaaacatccgacttggcgcatttgcttcaccttctctaccaaaaaa  18388200                                                                                                -----                                                                                                <----              --------->ZAT14                                                                  ------              <---------ZAT14                                                                  <-----              <-------TEIL                                                                     <-----              --------->ZAT18                                                                  <-----        <-------TEIL                                                                           <-----       --------->CCA1(2)                                                                       ------       --------->GLK1(2)                                                                     <------ZmHOX2a(1) ---------ANAC58                                  ----------->GT1                   <------ZmHOX2a(1) ---------ANAC58                                  ------>ZmHOX2a(1)               <---------TOE2(3) --->DOF2 <---------TOE2(3)              <---------ANAC58                       ---------->DOF2<----- --->DAG2<-----------RAV1(2)             <---------ANAC58                       =====================   gcgcgtgagattcaggttcactgtatacattaagagcctattgtcttgtctcctgtaaaaccagaagaaaacaaaaattcaacaaaggataacaaggacg  18388300 -->PIF5 ---PIF5 --->O2                                                            <---------TOE2(3) ----ANAC58                                                        <---------TOE1(3) ----O2 --------->ATHB12                  ----------->GT1          <XXXXXXXXXXXXXXXXXXXXMIR863-5P ----bZIP60(2)                          --------->ICU4    ----------->GT1<---------TOE2(3) ----TGA1a                            <---------AHL20(2) <---------------AtSPL8                    <- --->TGA1a           --------->YAB1  --------->AHL20(2) --------->ZAT14 --------->MYB52(1) ------>ZmHOX2a(1) ----ANAC58     <------NtERF2        <---------AHL20(2) <---------ZAT14 <-----------GT1  ============ ====bZIP_DOF--------->At4g35610   --------->YAB1 <-----------GT1  <---------YAB1        ----------->RAV1(2)   tggctattcttcattggctgcattcacaagagtcgaatattaattagtaatttcacagtatagtacattaagattaacgagacctattgtctcctgtaat  18388400                                                                                      --------->ICU4                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                              <---------ANAC58                    <---------AHL20(1)                                              <---------O2                        <---------AHL20(2)                                              <---------TGA1a                     --------->AHL20(2)                                              --------->O2  <------------CBF     --------------->AGL15                                              <---------bZIP60(2)              <---------AHL20(2)              ----------->GT1                 --------->TGA1a                  --------->AHL20(2)             ----------->GT1                  <---------ANAC58 <---------MYB46(3)<---------------AGL15           --------->MYB52(1)            ---------->DOF2   --------->ATHB12   --------->AHL20(2)          --------->CCA1(2)              ===============bZIP_DOF              <---------AHL20(2)   ----------->RAV1(1)          ---------->DOF2           <---------YAB1    --------->YAB1       <--- --------TOE2(3)                ========================bZIP_DOF            --------->TOE2(3)   <---- ==============RAV   <----------ID1  <----------ID1     --------->YAB1 ------------>CBF ----------->GT1   tgaggcaacaagataagggtaaaacgagaaaaacaaaagagaacaaagacgtggctatttatcattggttgaattcaatattaatttaattagtaatttc  18388500                                                                          <-----------HVH21                                                                      <---------ICU4                                                                     <---------YAB1                                                                   <---------ICU4   ----------->GT1              <---------YAB1                                       --------->YAB1 <---------ANAC58  --------->ZAT14                                                 <---------YAB1  <---------ANAC46  <---------ZAT14                                               <---------ICU4    <---------ANAC58  <---------ZAT18   <---------ANAC46                     <-----------RAV1(1)  --------->At4g35610  -- ------At5g28300  ------>ZmHOX2a(2)            <----------DOF2  --------->YAB1<---------At4g35610  -- -------GT1 --------->YAB1                   *TSS       <---------TOE2(3) <-----------TGA1         --   acagtgttctcaaatcgtgatcgtgtgtgtttcttctacctctgaaactctttttgtttatgttgatcatcatcatcgtcatctgcgtgtaaaacacact  18388600                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)                   --------->AGP1                   <-----------ARR10                   --------->ARR14(3)                   <---------ARR11(3)                   <---------ARR14(3)                   <---------ARR14(2)                   --------->ARR14(2)           <---------ANAC58           <---------ANAC58           <---------TGA1a           <---------O2           --------->bZIP60(1)           <---------bZIP60(2)           --------->TGA1a           ==============================bZIP_DOF           --------->O2          ----------->STF1                                         --------->TOE2(3)             <---         <---------DOF5.7(2)                                       --------->TOE1(3)          <------        ----------->HVH21                                         --------->ZAT6             <-------        --------->WRKY12                                      --------->At5g28300            --------       --------->DOF5.7(2)    ---------->DOF2               --------->ANAC58                 <------- ------->ANAC58    --------->ARR11(3)                       --------->ANAC58         <-----------GT1 ------->ANAC58    <---------GLK1(2)       <---------YAB1 --------->MYB52(1)        <-----------GT1 ------->ANAC46   <---------CCA1(2)      --------->YAB1  ------>ZmHOX2a(1)         <---------AHL20(2)   cacgccatcgttgacgtctcagatcttcacataaaagcttctattatcaaactctcttcctcacggtaaccctaactatctgtaatttatctctctacac  18388700                                                  ================================HOX2a_HOX2a                                                  ------>ZmHOX2a(1)                                                <---------HSFC1(2)                                                --------->HSFC1(2)                                               <------ZmHOX2a(2)           ------>ZmHOX2a(2)                                              <---------GLK1(2)           --------->GLK1(1)                                              --------->AGP1              <---------GLK1(1)                                              <---------ARR14(2)         --------->ARR11(3)                                              --------->ARR14(2)         <---------ARR11(3)     <---------CCA1(2)           <----------DOF2------>ZmHOX2a(2)    <---------ANAC58 -------DOF2           --------->YAB1         --------->ARR11(3)     <---------ANAC55(2)            < ---ALFIN1             <---------ICU4         <---------ARR11(3)     <---------ANAC58           <---- --REM1(2)            <---------ATHB12     <---------HSFB2a(2)       --------->ANAC55(2)  <------ZmHOX2a(2) ->ZAT14         --------->TOE1(3)         --------->HSFB2a(2)      <-------TEIL   <---------YAB1<--- --ZAT14         --------->TOE2(3)         <---------HSFC1(1) --------->MYB52(1)<---------MYB52(1)  -   tttcttcatctcttaatcaccttaatcatcttaagctttgtatttctagatccttctcccaaaacaacgattcgtgatctccgttctcatagatcagttt  18388800                               <---------CCA1(1)                                         --------->GLK1(2)                               <---------RVE1(1)                                         --------->ARR14(2)                              <---------ARR11(3)                                         <---------ARR14(2)       <---------CCA1(1)      --------->ARR11(3)                                    --------->LBD16 ---------ARR14(2)      <---------ANAC58                                           <---------HSFB2a(2) -----LBD16             <---------ANAC58                       <---------ANAC46    --------->HSFB2a(2) ------ANAC46           <---------ANAC46                   <---------GLK1(1)  <---------GLK1(1) -------->ARR14(2)  <---------GLK1(1)              <----------DOF2           <---------GLK1(2)   cggatttggatatttcttagggatttgtgtgagatatttttagaattgtttcgatttagggatttgtgtgaagaagatggattttccagagaatttgcct  18388900                                                                               --------->MYB52(2)                                                                             <---------MYB52(1)                                                                        <---------ARR14(2)                                                                        --------->GLK1(2)                 <---------At4g35610          <---------ICU4            --------->ARR14(2)       <------ZmHOX2a(1)           <---------ANAC58                    <---------GLK1(2)  --------->CCA1(2)                <---------ANAC58                  --------->LBD16 <---------ARR14(2)             <---------CCA1(2)                   --------->HSFB2a(2)          <--- --------->ARR11(3)  <---------GLK1(2)    ---------->DOF2           <---------HSFB2a(2)   <---------ANAC46   tcagatataggaagattagagcagattgtttctcatttcttcccaaaagcattacacatagttcttaattccagaatcccttcgttgcaatctcgtggtc  18389000  Previous    Next  AGI:  At3g49590.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48537.1) Range:  from: 18388545    to: 18391269    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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