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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               -----
                                                                                           ---------
                                            ------>MYB46(1)          --------->TOE1(3) <---------ARR14(2)
                     <---------ICU4         ------>MYB83             --------->TOE2(3) --------->ARR14(2)
                     --------->YAB1       <---------MYB59<---------ZAT2                --------->GLK1(2)
       <----------DOF2        ---------->DOF2    ---------->ARF1   -------->P         <---------GLK1(1)
---------DOF2  ----------->RAV1(1)        <---------MYB111(1)  <---------ICU4         --------->GLK1(1)
 
cctttcttagctttagcccaacaagtatgaccaaaatgccctcgacctacttctctcccaagctcatacttaccttcaaaattcttcgcaaatccgaaat  18318500
                                   <---------ATERF1(2)
                                   --------->DEAR3(1)
                                   <---------DEAR3(1)
                                   --------->RAP2.3(3)
                                   --------->ATERF1(2)
                                  --------->ATERF1(1)
                                  <---------LBD16
                                  --------->DEAR4(2)
                                 --------->LBD16
                                 <---------ATERF1(1)
                                 ------>NtERF2
                              <---------ATERF1(1)
                           <---------At4g35610
                           ------>NtERF2
                           <---------ATERF1(1)
                           --------->At4g35610
                          --------->DEAR3(1)
                          --------->RAP2.3(2)
                         <------NtERF2
                         --------->RAP2.3(1)
                         --------->ATERF1(1)
                         --------->DEAR4(2)
                        <---------RAP2.3(1)
                        ------>NtERF2
                        <---------ATERF1(1)
                        --------->ABI4(1)
                       --------->RAP2.3(3)
                       --------->RRTF1(2)
                       --------->RRTF1(3)
                       --------->RAP2.3(2)
                       --------->RAP2.6(2)
                       --------->DEAR3(1)
                       <---------ATERF1(2)
                       --------->ATERF1(2)
                       <---------DEAR3(1)
                       --------->ANAC46
                       <---------ALFIN1                                                        -----
                      --------->RAP2.3(1)                                                    <------NtERF2
                      --------->ORA47(2)                                <---------ARR14(2)   -------
                      --------->ERF1 <------NtERF2                     <------ZmHOX2a(1)     -------
                      --------->RRTF1(1)                            --------->LBD16          -------
                      --------->ATERF1(1)                       -------->P                  ------>NtERF2
                      --------->RAP2.6(1)                     --------->AtMYB61             <-------
                      --------->DEAR4(2)                 =====================HOX2a_HOX2a  ---------
                     <---------ATERF1(1)                 ------>ZmHOX2a(2)               <----------
                     ------>NtERF2--------->ORA47(2)    --------->At4g35610             --------->O2
                     --------->At4g35610         ------>ZmHOX2a(1) --------->LBD16  ------->TEIL
                     <---------At4g35610     --------->ARR14(2) ------>MYB83     <----------DOF2
    <-----------GT1  --------->LBD16------>NtERF2===============HOX2a_HOX2a     --------------->AtSPL8
  <---------MYB59    <---------RAP2.3(1)     <---------ARR14(2) ------>MYB46(1) --------------->AtSPL3
<-----------GT1     --------->ANAC46<---------ATERF1(1) <---------At4g35610<-----------RAV1(1)------
---->ICU4        <---------ARR14(2)--------->DREB2C(2) <---------ARR14(2)  --------->ALFIN1<--------
>LBD16           --------->ARR14(2)--------->RAP2.3(2) --------->ARR14(2)  <---------AtMYB61<-------
 
ttttatctaacctttctccgattccgccgccgcttccgccggcttcactatcctcagggatcggaccatcccgaggatgtggtgctgtacctcgtcgccg  18318600
       <------NtERF2
      ------>NtERF2
     --------->ANAC46
     --------->RAP2.6(2)
     --------->DEAR3(1)              <------NtERF2                                                 -
     --------->RAP2.3(2)          <------NtERF2                                                    <
     --------->RAP2.3(3)          --------->ATERF1(1)                                             --
    --------->ERF1              <---------DEAR3(1)                                               <--
    --------->RAP2.3(1)         --------->ALFIN1                                                 ---
---------->DOF2           --------->ALFIN1                                 --------->LBD16       <--
->NtERF2                <---------At4g35610                               --------->DEAR3(1)    <---
-->DEAR4(2)             --------->At4g35610                       --------->GLK1(1)            <----
-->RAP2.3(1)           <---------TOE2(2)                          <---------GLK1(1)            -----
-->ATERF1(1)           <---------TOE1(2)                       --------->LBD16                <-----
--RAP2.3(1)           <-----------RAV1(2)                     --------->LBD16                -------
>DEAR3(1)        --------->ARR14(2) --------->LBD16           --------->ANAC46               ------>NtERF2
-HVH21<---------RAP2.6(3) ----------->HVH21                  <---------LBD16<------NtERF2   --------
--->DEAR3(1)     <---------ARR14(2)<---------ANAC46          <---------HSFB2a(2)    <---------At4g35610
-DEAR3(1) --------->ICU4--------->ZAT2                       --------->HSFB2a(2)--------->ALFIN1----
--ATERF1(1)--------->ATHB51    <------ZmHOX2a(1)       <-----------GT1   <---------LBD16   <--------
 
tcttaaagccgccataatcggtttcgcaggtgaaggaggcgggaatggccatttgaattttcttcccggagttctcgccggagatggagctactcccgcc  18318700
  ------->GAMYB
-------->MYB52(1)
---------DOF5.7(2)
--------->HVH21
-------MYB52(1)
------>DOF5.7(2)
---------HVH21                                                           <---------YAB1           <-
------DEAR3(2)                                                         --------->YAB1             <-
-----ATERF1(2)                                                        <---------YAB1           <----
---->ATERF1(2)                                                        --------->ICU4      <---------MYB46(3)
-NtERF2                                                             --------->YAB1       <---------AtMYB61
-->LBD16                                           <------NtERF2   <---------YAB1     <---------AtMYB61
->ANAC46                                        <---------LBD16    --------->ICU4     --------->ALFIN1
----->LBD16                      --------->WRKY38(1)     <---------LBD16 --------->ICU4<---------MYB46(3)
-LBD16<----------DOF2            --------->WRKY12 --------->LBD16 <---------TOE2(3)<-----------RAV1(1)
 
ggtaacgggctttgaaatgggctgatgttgtaagggttgacttctgaagtagccggagactggggaattgatgatgatgatgaagtctggtggtggtttt  18318800
                                                  <---------DEAR3(1)
                                                  --------->DEAR3(1)
                                   --------->GLK1(1)
                                  <---------ARR14(2)
                             <---------ANAC46     ----------->HVH21            --------->ALFIN1
                             --------->ALFIN1     --------->ETT(2)       ----------->HVH21
                           --------->LBD16       --------->ATERF1(1)------>NtERF2                <--
                          <---------ANAC58       <------NtERF2      --------->LBD16              <--
  <-----------------AG    <---------ANAC46     <---------DEAR3(1)  <---------ANAC46              <--
  <-----------------AGL1  <---------ANAC58    <------NtERF2        <---------RAP2.6(2)          ----
----------->HVH21        <---------LBD16    <---------DEAR3(1)    <---------LBD16              <----
--------ANAC58        <-------GAMYB<---------GLK1(1) <---------DEAR3(1) --------->At5g28300 <-------
--------ANAC58       <---------MYB46(3)    <------NtERF2      <---------HSFB2a(1)           <-------
-----AtMYB61       <---------At4g35610   <---------DEAR3(1)   --------->HSFB2a(1)      <-----------RAV1(1)
 
ggtgtgaccgatgtggtaactgagcggttgcggaggggatttcgtcgtcgtcgtcgacggtggaaatgttccggctgtaacagtggcccattgttgccgg  18318900
               ----------->GT1
       <------------CBF                         ----------->HVH21
     <---------AHL20(2)                         <---------ARR14(2)
     <---------YAB1     --------->DAG2         <------ZmHOX2a(1)
-------WRKY45 <---------LBD16              --------->ALFIN1                      --------->MYB46(3)
-------WRKY38(1)       ---------->DOF2  <---------DEAR3(1)                       <---------MYB52(2)
-------WRKY12------>ZmHOX2a(2)         --------->SPL7                 --------->MYB52(1)
----->WRKY18(1)--------->LBD16         <---------ORA47(1)          <---------ANAC58
-------HVH21 <---------LBD16         <---------SPL7                <---------ANAC58
--ANAC58  --------->ATHB12           ----------->HVH21            --------->At4g35610     ----------
--ANAC58<---------WOX13(1)        --------->MYB52(1)              <-----------------------TaNAC69(2)
 
tcaaagttttaattgatcggggaaaaaaaagtcaaactatcggacggtgaggagacggagttgaatagtagcttaacgagagaaacgaccgatgagaaaa  18319000
                                       <------------CBF
                                     --------->AHL20(2)
                                    --------->AHL20(2)
                                    <---------AHL20(2)
                                --------->AHL20(2)
                                <---------AHL20(2)
                               --------->AHL20(1)     <---------CCA1(1)
                               <---------AHL20(1)     <---------RVE1(1)
                               <---------AHL20(2)    --------->ARR11(3)                        <----
                        <---------AHL20(2)           <---------GLK1(2)                        <-----
                   <---------ARR14(2)--------->AHL20(1)                                 --------->CCA1(2)
                   --------->ARR14(2)<---------AHL20(2) <---------AHL20(2)     ------->GAMYB  <-----
            ---------->DOF2    --------->AHL20(2)    <---------ARR11(3)     --------->MYB52(1)<-----
->GT1  ---------->DOF2  --------->AHL20(2)    --------->MYB52(1)       --------->AHL20(2)     <-----
 
attagagaaaaaaaggaaagcgaatatttaaaaatttaattaaattgactaacaaagatttttttgttaaacaaaaatataacggaagaagagacgggcg  18319100
         --------->At5g28300
       <---------DEAR3(1)
       <---------ANAC46
       <---------DREB2C(2)
  <---------ICU4               --------->ANAC58                                             --------
  --------->YAB1               --------->ANAC58                                             <-------
---GAMYB <------NtERF2         --------->ANAC46     <-----------GT1                        ---------
----ANAC46              ----------->GT1            <---------AHL20(2)                      ---------
----DEAR3(1)           ----------->GT1            --------->AHL20(2)                   --------->AHL20(2)
----ANAC58          ---------->DOF2            <--------HAHB4              <---------AHL20(2)      -
----ANAC58----------->ARR10    <----------ID1 <---------YAB1           <---------ZAT6 --------->YAB1
 
ttgaataatggcggtgatttgctaaaagggaaataagccaaaaaaaaccatcatttaatcgtttaatacttgtagttttaaatttggaataaaaatatct  18319200
                                                                              ------->TEIL
                                                                            --------->YAB1
                                                                           <---------ATHB12
                                                                        <---------WRKY38(1)
                                                                      <--------ZAP1
                                                                      --------->At5g28300
                                                                      <-----------HVH21   --------->ATHB12
                                                                   --------->At4g35610    --------->ATHB51
       <-----------RAV1(1)                            --------->TOE1(2)--------->WRKY18(1)--------->AHL20(2)
--------->AHL20(2)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------AHL20(2)
<---------AHL20(2)                       ----------->GT1       --------->MYB52(1)    ------->GAMYB >
->ARR11(3)                        --------------->AGL15     --------->ANAC55(2)     --------->ANAC55(2)
--ARR11(3)                        <---------------AGL15     <---------ANAC55(2)     <---------ANAC55(2)
>RVE1(1)                          --------->AHL20(2) ----------->RAV1(2)<---------WRKY12 --------->ICU4
>CCA1(1) ---------->ID1           <---------AHL20(2)------->TEIL---------->DOF2   --------->MYB52(1)
-------->AHL20(2)         --------->YAB1--------->MYB59 --------->TOE1(1)--------->WOX13(1)   ------
 
catttattttttgttgttttttaaaaccatcatatttttaattttggtaatttcgaacctggtacttaacagcggtcaatgaacataacggaattatttg  18319300
                             --------->YAB1
                         --------->AHL20(2)
                         <---------AHL20(2)
                         <---------YAB1
                        <---------AHL20(2)
                     ------->TEIL<---------AHL20(2)
                  <---------ANAC46
                  <---------ANAC55(2)
                  --------->ANAC55(2)
                  <---------ANAC58
                  <---------ANAC55(1)<-----------GT1
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                            <xxxxxxxxxxxx
    <---------AHL20(2)  --------->AHL20(2)                                     <---------ZAT6
<---------ZAT6<---------DAG2 <---------AHL20(2)                           <----------DOF2
----------->GT1   <---------ANAC58--------->YAB1                   <---------ARR11(3) ------->GAMYB
>>>>>>>>TAC1  --------->TOE1(3) --------->AHL20(2) --------->DAG2  --------->ARR11(3)--------->ANAC58
----->HVH21<-----------GT1   --------->AHL20(2)   ---------->DOF2<---------AHL20(2)  --------->ANAC58
 
acagtgttaaattttaaccttacgtattttaattatataataacaggtttacaaaaagttttgtttatattatcttgctatagtggtaacgcacagtttg  18319400
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AGI:  At3g49370.1   
Description:  calcium-dependent protein kinase, putative / CDPK, putative. similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT5G24430.1); similar to calcium-dependent protein kinase, putative / CDPK, putative [Arabidopsis thaliana] (TAIR:AT2G46700.1); similar to calcium/calmodulin-dependent protein kinase CaMK1 [Nicotiana tabacum] (GB:AAL30818.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48591.1); similar to serine/threonine protein kinase pk23 [Lycopersicon esculentum] (GB:AAL87457.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domai
Range:  from: 18315727    to: 18318891    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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