Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ------>ZmHOX2a(2)                                                                  <---------ARR11(3)                                                              --------->ANAC55(2)                                                              <---------bZIP60(2)                                                              <---------ANAC55(1)                                                              --------->bZIP60(1)                                                              <---------ANAC58                                                              --------->TGA1a                                                              <---------ANAC58    --------->ANAC58                                          <---------bZIP60(1)    --------->ANAC58                                          <---------O2 ->ANAC55(1)                                                  --------->O2 ->O2                                                         <---------ANAC46      --------->MYB52(2) --O2                                                         <---------TGA1a       <---------MYB46(3) --->GT1                                                      <---------ANAC55(2) <---------MYB52(1) ->ANAC58                                                    ----------->STF1    ------->MYC3 ->ANAC46                                                   <---------TGA2(2)    <-------MYC3 ->ANAC58                            <---------ANAC46      ----------->TGA1   <---------ALFIN1 --ANAC55(2)           <---------ANAC58<---------YAB1    --------->YAB1    --------->AtMYB61 ->ANAC55(2)           <---------ANAC58<---------ANAC46  <---------ICU4   --------->MYB46(3) -->TaNAC69(2)<---------DEAR3(1)  <-----------RAV1(1)   --------->ICU4------>ZmHOX2a(1)   actctcaagaaaaacgtctgcgtttgcgttctctatgtgttgtgtttggatttttggaatgatgacgtgatcctcgaccaccacgtttgttcgaacccat  18248200                                                  ------->TEIL                                                 <---------AtLEC2                                               <---------YAB1                                        <---------AHL20(2)                                       --------->YAB1                           --------->YAB1                     <---------YAB1    --------->AHL20(2)             --------->TOE2(3)                   <-----------GT1     <---------AHL20(2)             <-----------HVH21      ------>ZmHOX2a(1)                <---------AHL20(1)        --------->MYB46(3)   ttttgttcctgtctattgttgttacaattgttcaccttcaataaaatttatgcatgtttatatcaaaaccatcgtcaaacattgacaatttgacttagta  18248300                  <---------------------WRI1         <---------AHL20(2)        <---------ARR11(3)        --------->AHL20(1)        <---------AHL20(1)  <---------ARR11(3)           ----------->GT1  --------->GLK1(2)          ---------->DOF2                   ----------->GT1         --------->ALFIN1  --------->ARR11(3)   --------->YAB1             <---------ATHB12                 <---------ANAC55(1)   caaaaatctatatatttgtgatcaaagataacaaagtaaaaaacaaaaactaatcacacactaacatgtgaaaactaaatctattaagtgtgtgactcac  18248400                                                                                        --------->MYB52(1)                                                                                       ------->GAMYB                                                                                       --------->AtMYB61                                                                                       <---------ALFIN1                                                                                      <---------MYB52(2)                                                                                      <---------MYB111(2)                                                                                      <---------MYB55(2)                                                                                     ------>MYB83                                                                                     ------>MYB46(1)                                                                                   --------->AtMYB61                                                                                  --------->MYB46(3)                                                                                 XXXXXXXXXXXXXXXXXXXX                                                                                 >>>>>>>>>>MYB80                                                   --------->YAB1  --------->ARR11(3)-------->P                                    <---------ANAC58  <---------ICU4            <-----------GT1   <--           --------->CCA1(2)---------->DOF2 --------->TOE1(2)   <-------TEIL<----------DOF2    ------  <-----------GT1<------ZmHOX2a(1)  <---------ANAC58  --------->YAB1 ------>ZmHOX2a(2)--------->MYB46(3)   caatttactggagaaacgaggatgtctcatcaaagtttgcttaattccttcgataatcatatcaggttcgatcttgttctttaaaccaaccaccgaaatg  18248500                                       <---------SPL7                                       --------->LBD16                                      --------->RAP2.6(2)                                      --------->DEAR3(1)                                     --------->ATERF1(1)                                     <---------LBD16                                     <------NtERF2                                    <---------ATERF1(1)                                    --------->ABI4(1)                                   <---------DEAR3(1)                                   --------->RRTF1(3)                                   --------->RRTF1(2)                                   --------->DEAR3(1)                                   <---------ATERF1(2)                                  --------->ORA47(2)                                  --------->RAP2.6(1)                                  --------->DEAR3(2)                                  --------->ATERF1(1)                                  <------NtERF2                                  --------->RRTF1(1)                                  --------->DEAR4(2)                                 <---------ATERF1(1)                                --------->ANAC58                                --------->ANAC58                   <---------ANAC46--------->ATERF1(2)                   <---------ANAC58--------->RAP2.3(2)                   ----------->GT1--------->RAP2.3(1)                  <-------TEIL  --------->ANAC46                                           <---------MYB52(1)                  <---------MYB46(3)------>NtERF2        ------>ZmHOX2a(1)                --------->LBD16                 --------->ALFIN1------>NtERF2     <---------MYB46(3)             <---------MYB52(1)    ----------->GT1<---------ANAC58--------->RAP2.3(3)  <---------ALFIN1        <-----------RAV1(1) >MIR420        <---------MYB52(1)--------->ERF1 <-------GAMYB          <----------DOF2  --------->ANAC46 -------REM1(1)--------->LBD16  <---------DEAR3(1)<--------P------>ZmHOX2a(1)<-----------GT1 --->ICU4    <---------LBD16   <---------ABI4(2)<---------MYB46(3)      <---------DAG2--------->ARR14(2)   atgtagcagttaaactccggtgcgtgaaatagacgcgccgccggactaagcggttgctcctcctcttctacctcctttttcactgttgtttccgctattt  18248600                       >>>>>>>>>>>>>>>>>LFY                --------->YAB1                --------->TOE2(3)              --------->ARR14(2)            <----------DOF2                   <---------ICU4              ------->TEIL                 ------>ZmHOX2a(2)                 --------->ICU4              <---------ARR11(1)         <---------ARR11(3)                 <---------AHL20(1)              <---------ARR14(2)         --------->ARR11(3)                --------->YAB1             <---------ARR14(1)  <------MYB46(1)             <---------ARR11(3)             <---------CCA1(2)   <------MYB83        <-----------GT1    --------->YAB1          ---------->ID1     --------->ATHB12   ---------->ID1  <----------DOF2   gccctcgtcttcgtcgtatcttaatctccattgtttggtttttgatctttgtttttttctctagttctttcgactcataatatttatgtccaaaaaaaaa  18248700                                                             <----------DOF2                                                             ========================================                                                        <-----------GT1                         =====                                                     <---------AHL20(2)                         -----                                                     <---------ICU4                             -----                                                    --------->AHL20(2)                          -----                                                 --------->AHL20(2)                             -----                                                --------->ARR11(3)                              -----                                                <---------AHL20(1)                 --------->YAB1<---                                                <---------ARR11(3)           <-----------GT1    <----                                             <---------AHL20(2)           <---------ARR14(2)    -----                                             --------->AHL20(2)           --------->ARR14(2)    -----       --------->HSFB2a(2)           <----------DOF2--------->ICU4   --------->ANAC58         <------    <----------DOF2             <----------DOF2 --------->AHL20(1)   --------->ANAC58       <--------   actaatcttttggaatgttttcttactcttaattcttttctttttaaaaaaatatttattactcttttcgctcgcaaattttccatcatatgtgttacac  18248800 =====bZIP_DOF =============================bZIP_DOF ---->ANAC58 ---->ANAC55(1) ---->ANAC46 ---->bZIP60(2) ---->TGA1a                                                         <---------TOE2(3) --------HVH21                                                 --------->ATHB12 -----O2                                  ------------>CBF    <---------YAB1 ---->ANAC58                           --------->ZAT14<----------DOF2 ---->O2           <----------DOF2   --------->ANAC46<---------ANAC58 ---ALFIN1  --------->YAB1         <-----------GT1   <---------ANAC58  --------->GLK1(2) ---GT1------------>CBF  <---------MYB52(1)   <---------ATHB12--------->ICU4                       <-   gtcaaactttccaatagtattcttttcgttactaaattcacttcaccaataagtagcttttcttatgattaagaatttgatttttggtttattcggacat  18248900                                                                     <-------TEIL                                                                    --------->GLK1(2)                                                                    --------->CCA1(2)                                <-----------GT1                     --------->ARR14(1)                            <---------AHL20(2)                     <---------GLK1(2)                            <---------AHL20(1)                     --------->ARR11(1)                            --------->AHL20(1)       --------------->AGL15                            --------->AHL20(2)   --------->KAN4(2) --------->ARR14(2)                           --------->AHL20(2)   <---------KAN4(1)  <---------ARR14(2)                      <---------MYB59    <<<<<<<<<<MYB80         ----------->ARR10 <---------TOE2(3)                   <---------ARR14(2)   <------MYB83<-----------------AGL2 <-------TEIL  <-----------GT1 --------YAB1      --------->ARR14(2)   <------MYB46(1)    <---------AtMYB61--------->MYB52(2)-------   tataaaaaataggtttaagtagaaccgaattttatttcaatttggtttgaacattctagttttggtttagattcgggttcgtttttagattaaacgattc  18249000                   --------->TOE1(3)                                <---------ICU4                   --------->TOE2(3)                               --------->ICU4                  ----------->GT1                               ------>ZmHOX2a(1)                 <---------TOE1(3)                          --------->ARR14(2)       <---------AHL20(2)                 <---------TOE2(3)                          <---------ARR14(2)      <---------AHL20(2)              <---------MYB52(2)                            <---------ARR11(3)      --------->AHL20(2)       --------->YAB1                 <---------DAG2        --------->GLK1(2)      <---------WOX13(1)       <---------ICU4      <---------AHL20(2)           --------->YAB1          <---------YAB1     --------->AHL20(2)  <---------AHL20(2)         <---------AHL20(2)      <---------GLK1(1) --------->YAB1 --------->MYB52(1)    <----------DOF2 <---------TOE2(3)  <---------YAB1 -->GLK1(2) --------->ZAT6 --------->AHL20(2)      --------->AHL20(2)<---------AHL20(2)             -   taatgaaaataataacactaacgttatatttttttaaaaactttttttgtatatttaatgaaaatcctaatttttatgaattctgattaatttggattta  18249100  Previous    Next  AGI:  At3g49200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49210.1); similar to condensation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 18246254    to: 18248631    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g49210.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G49200.1); similar to condensation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G49190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 18249033    to: 18252222    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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