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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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        --------->LBD16
       --------->HSFB2a(2)
  ------>MYB83
  ------>MYB46(1)
<---------MYB59
--->MYB83 <---------ARR14(2)
--->MYB46(1)                                                    --------->ANAC46
-----MYB55(2)                                                   --------->ANAC58  --------->ANAC58
-----MYB46(2)                                             --------->At5g28300     --------->ANAC46
---->MYB46(3)                                            --------->TOE1(3)        --------->ANAC58
-----MYB111(1)                                           --------->TOE2(3)   --------->ANAC58
-----MYB52(2)                                            ----------->GT1     --------->ANAC58
-----MYB111(2)           --------->TOE1(3)             <---------At5g28300   --------->ANAC46
---->AtMYB61             --------->TOE2(3)         <---------MYB46(3)     <---------ZAT18
--->ANAC58--------->ARR14(2)                      <---------MYB52(1)  <---------ICU4       <--------
--->ANAC58<---------GLK1(2)        <---------At4g35610<-----------GT1 --------->YAB1       ---------
-NtERF2<---------HSFB2a(2)        ------->TEIL   <-------GAMYB  --------->ANAC58 --------->LBD16
 
aaacctaactccagaaactcaacaaaaaccttaattgcatctaattctcttccgttgttaccgtaacaagccatcatcgcactccacgaaacaacatctc  18240200
                                                      --------->GLK1(1)
                                              --------->GLK1(1)
     <-----------ARR10                       <---------ARR11(1)
     --------->ARR14(2)                      --------->GLK1(2)
     <---------ARR14(2)                      --------->ARR14(2)
     <---------ARR11(3)                      ------->TEIL
     <---------ARR11(1)                      <-----------ARR10
     --------->ARR11(3)                      <---------ARR14(2)
    <---------CCA1(2)                       <---------GLK1(2)
    <---------ARR14(1)                      <---------ARR14(1)   --------->ANAC46
    ------>MYB46(1)                         <---------CCA1(2)    --------->ANAC58
    ------>MYB83                          --------->DEAR3(1)     --------->ANAC58
  <---------MYB59                   <----------DOF2  <---------ARR14(2)
-ARR11(3)   --------->YAB1        --------->At4g35610<---------GLK1(2)   --------->MYB52(1)
>ARR11(3)  <---------YAB1         <---------At4g35610--------->ARR14(2)<---------ATHB12      -------
 
gcttaccaaatcttctcatagtctcaaacacatcttcagctttcgccgaatctccagatttcgaatacaagctaatcaacgaattgtagagaaccgaatc  18240300
                                                      <---------ANAC58
                                                      <---------ANAC58
                                                      <---------ANAC46
                                                      <---------ANAC55(2)
                                                      --------->ANAC55(2)
                                                     <-----------------------TaNAC69(2)
                                        --------->ANAC46
                                        --------->LBD16  <---------ZAT2
                                       --------->HSFB2a(2)
                                       <---------HSFB2a(2)            --------->ARR14(2)
                            --------->REM1(2)--------->ANAC58         <---------ARR11(3)
                          <---------------AtSPL3---------->DOF2 --------->CCA1(2)
                         <---------ANAC58    --------->ANAC58  <---------ARR14(2)
                         <---------ANAC46    ----------->GT1   --------->ARR14(2)      ---------->DOF2
-->GLK1(2)               <---------ANAC58--------->LBD16 --------->ZAT2--------->CCA1(2)--------->DAG2
 
aggctcgatatcaaactcgattaatcgagcgtgtacgagtttcccgagacgaaaatcgcgtgctcggatacaagatttgagaagtgaagagaaagtgact  18240400
                                                                --------->LBD16
                                                                ------>NtERF2                      <
                                                               --------->ANAC46                   <-
                                                            ------>ZmHOX2a(2)                    ---
                                                           --------->GLK1(1)                    ----
                                                           <---------GLK1(1)                    <---
                                                           <------ZmHOX2a(2)                    ----
                                                          --------->ARR14(2)                   -----
                                                          <-----------ARR10--------->MYB52(1)  <----
                                                          --------->ARR14(3)                   -----
                      --------->ANAC58                    <---------ARR14(2)                  <-----
                      --------->ANAC58                    <---------ARR14(3)                  <-----
                      --------->ANAC46         --------->At4g35610        ----------->TGA1    <-----
                <-----------HVH21          --------->ARR14(2) <---------LBD16          --------->MYB52(1)
           --------->ARR14(2)         <---------At4g35610 --------->ARR11(3)       --------->GLK1(2)
           ------->TEIL               --------->At4g35610 <---------AGP1--------->At4g35610   <-----
           <---------ARR14(2)   <------ZmHOX2a(2)         <---------ARR11(3) <---------ANAC46<------
      =================================HOX2a_HOX2a      ----------->ARR10 ----------->HVH21 <-------
      <------ZmHOX2a(1)        --------->ARR11(3)    --------->ANAC46   <---------At4g35610<--------
 
gagtccataggacgaatcccatcacgagccatgagatcaagagctgaaaccgctccacgaagatctccggcattgagatgacggagaatcaaacggtcgg  18240500
      ------>ZmHOX2a(2)
---------ANAC46
-----NtERF2
--->NtERF2
----->DEAR3(1)
------DEAR3(1)
------->HVH21
---->RAP2.3(1)
--NtERF2                                        --------->LBD16
---->ATERF1(1)                 --------->AHL20(2)<------NtERF2
----RAP2.3(1)              <---------TOE2(3)   <---------ANAC58
----DEAR3(2)           <-------GAMYB           <---------ANAC46         --------->YAB1
----ORA47(2)          <---------MYB46(3)       <---------ANAC58        <---------YAB1
----ATERF1(1)         <---------DEAR3(2)      <<<<<<<<<E2Fc     --------->DAG2                     <
---DEAR3(1)          <---------DEAR3(1)       <---------LBD16  ---------->DOF2                *TSS -
--ORA47(1)         --------->MYB52(1)         <<<<<<<<<E2Fd --------->ANAC58                --------
---HVH21          <---------SPL7<---------AHL20(2)          --------->ANAC58                >>>>>>>>
 
cgacgttgatccgatttgaaacggacggttgagatttaatcggaagtttggcgggagatggaaacgaaaagcttatcatcgccattgttctccaatctaa  18240600
                <-----------GT1
               --------->YAB1
               <---------ICU4
              --------->ICU4
        ----------->GT1
    <<<<<<<<<MYB98
    <---------MYB52(1)                                                                     ---------
 ------>ZmHOX2a(2)                                                                      --------->AHL20(2)
<------ZmHOX2a(2)                                                                       <---------AHL20(2)
---------ARR14(2)<---------YAB1                                          --------->ANAC46  <--------
-------->ARR14(2)------------>CBF  <-----------GT1                 <---------YAB1      --------->AHL20(2)
->TOE2(3) <---------MYB52(1)--------->ANAC46                    --------->ICU4--------->ANAC46
>RAP2.2 <---------ZAT6<---------ARR11(3)         <---------MYB52(1)------------>CBF    <---------AHL20(2)
 
acgatccgttactgttaattatcaatatcacacaaaatttacattatagtcccttaagtttgtggaaattatcaataagacacaaaactattaatttatc  18240700
                                 *TSS
                                 <---------GLK1(1)
                                --------->ARR11(3)
                                <---------ARR11(3)
     <-------TEIL         <---------AHL20(2)
--------->AHL20(2)       <-----------TBP                            <-----------GT1
>AHL20(2)           --------->TOE2(3)                             <----------DOF2
-AHL20(2)           --------->TOE1(3)                       <---------GLK1(2) <----------DOF2
 
aaattacatacatagttcataaaccctaatttatagatatcacaaaacccagacttggaatcagtttctctttacttccctctttctctgagctatggag  18240800
                                                          <-----------HVH21
                                                         ----------->HVH21                     -----
                                                        --------->LBD16                       ------
                                                       <---------LBD16                        ------
                                                      <---------LBD16                        <------
                                               ------>ZmHOX2a(2)                 <---------ANAC58
                                              --------->GLK1(1)                  <---------ANAC58 --
                     <---------ATHB12         <------ZmHOX2a(2)               --------->ANAC46<-----
                 ------>ZmHOX2a(1)           <---------ARR11(3)             ---------->DOF2  -------
                 =====================================HOX2a_HOX2a  <---------At4g35610      <-------
                 ====================================HOX2a_HOX2a   --------->At4g35610  <----------DOF2
                --------->TOE2(3)            --------->ARR11(3)    --------->ZAT2<---------ANAC46---
 
attactgtaatcgcttcttcctcaatcgatgaaggaattggaagttgggatctcaaaaccgggacagagcagcttcaattcaagccgtgtgcttctccgg  18240900
                 <------NtERF2
                ------>NtERF2
                <---------DEAR3(2)
               <---------At1g77200
               <---------DEAR3(1)
              <------NtERF2
             <---------SPL7
             <-----------HVH21
             <---------ATERF1(1)
            --------->ATERF1(2)
            --------->RAP2.3(3)
            <---------ATERF1(2)
            --------->DEAR3(1)
           --------->RRTF1(1)
           --------->ERF1
          --------->ABI4(1)
        --------->DEAR3(2)
     ----------->HVH21
---->RAP2.3(1)--------->ATERF1(1)
--->LBD16--------->DEAR3(1)                      <------NtERF2
>NtERF2 --------->MYB46(3)                --------->ZAT2
---DEAR3(1)--------->RAP2.3(1)            <---------At4g35610
------------------->WRI1                  <---------ZAT2
----ATERF1(1)------>NtERF2                --------->At4g35610
-->ANAC46--------->ANAC46            ------>ZmHOX2a(1)                                        ------
--LBD16<---------At5g28300        ------>NtERF2<---------DEAR3(1)                             <-----
--->NtERF2------>NtERF2          --------->DEAR3(1)                         <-----------GT1 <-------
 
cgcatggtctcaccgccgtcggcgaaaaatttctcgcctcctctcagctctcggcgagaaatacttctggctcgattttttactggtcttggactaaggt  18241000
                                                                                             -------
                                                                                          --------->At4g35610
--->ARR11(3)                                                                 --------->At4g35610
----ARR11(3)                 ---------->ID1                                  <---------At4g35610
--TOE2(3)       <-----------GT1   <----------DOF2                 <---------REM1(1)      <----------
 
ctcattctcaaacttgaaatcactgtttttttgttctctttggatagaaagtttgaaacttgttttgaattgtagcctcaagctgaagtgaagagctacc  18241100
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AGI:  At3g49170.1   
Description:  EMB2261 (EMBRYO DEFECTIVE 2261). similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT3G57430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63823.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69385.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42754.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:  from: 18237896    to: 18240595    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g49180.1   
Description:  transducin family protein / WD-40 repeat family protein. similar to guanine nucleotide-binding family protein / activated protein kinase C receptor, putative / RACK, putative [Arabidopsis thaliana] (TAIR:AT1G48630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61359.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680)
Range:  from: 18240734    to: 18242989    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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