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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-----------
GT1
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
DAG2
<---------
AHL20(1)
<----------
DOF2
--------->
AHL20(1)
<-----------
GT1
<---------
AHL20(2)
--------->
YAB1
--------->
ARR11(3)
<---------
YAB1
<---------
ARR11(3)
----------->
GT1
---------->
ID1
--------->
AHL20(2)
<---------
TOE2(2)
------
TOE2(3)
--------->
AHL20(2)
<---------
TOE1(2)
-
DOF2
--------->
AHL20(2)
<---------
TOE2(3)
<---------
AHL20(2)
agtttgtcttctaacccattctaaaaatatatttaatctctctcacccatagtactgaattacaaaggttttgaatcgaaggtatattataacttttttt
18026800
<--------
--------->
ANAC58
--------->
ANAC58
--------->
REM1(1)
--------->
bZIP60(2)
--------->
YAB1
<----------
DOF2
--------->
ANAC46
<---------
YAB1
--------->
At4g35610
--------->
SPL7
<---------
ICU4
<---------
At4g35610
---------->
DOF2
<---------
ATERF1(1)
--------->
ATHB12
<---------
LBD16
<-----------
GT1
----------------------->
TaNAC69(2)
<---------
YAB1
<-----------
HVH21
<---------
DAG2
----------->
GT1
------>
NtERF2
tttttgctaagtttatgatttgcattatgatcagcgttcacatcttcggagctaaactttttttaacaaaaagaacatagtgaatttggctacgccactg
18026900
<---------
ALFIN1
--------->
DEAR3(1)
--------->
ERF1
--------->
ATERF1(1)
<------
NtERF2
--------->
ABI4(1)
--------->
ANAC46
--------->
RAP2.3(2)
--------->
RRTF1(3)
<---------
ATERF1(2)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
RAP2.6(2)
--------->
RRTF1(2)
--------->
RAP2.3(3)
--------->
ORA47(2)
--------->
ERF1
--------->
RAP2.3(1)
--------->
RRTF1(1)
------>
NtERF2
<---------
ATERF1(1)
--------->
ANAC58
--------->
O2
<---------
ALFIN1
--------->
TGA1a
--------->
ANAC58
--------->
bZIP60(2)
--------->
DEAR3(1)
<---------
ATERF1(1)
<------
NtERF2
--------->
ATERF1(1)
<-----------
HVH21
<---------
ATERF1(1)
<---------
RAP2.3(1)
--------->
ANAC58
--------->
ANAC46
--------->
RAP2.3(2)
--------->
PCF2
--------->
ATERF1(1)
--------->
RAP2.3(1)
--------->
RRTF1(1)
<---------
RAP2.3(1)
<---------
ERF1
----------->
RAV1(1)
<---------
ATERF1(1)
<---------
YAB1
------>
NtERF2
<---------
AHL20(1)
--------->
ANAC46
<---------
AHL20(2)
<---------
O2
--------->
AHL20(1)
------>
NtERF2
--------->
YAB1
<------
NtERF2
------>
NtERF2
--------->
AHL20(2)
<---------
ALFIN1
--------->
WOX13(1)
--------->
ANAC58
<----
--------->
ANAC58
<---------
RAP2.3(3)
-------
--------->
ANAC58
<---------
DEAR3(1)
<----------
DOF2
---------->
DOF2
<---------
ANAC58
<---------
ATERF1(1)
<----------
DOF2
--------->
WOX13(1)
<---------
ANAC58
------>
NtERF2
------>
ZmHOX2a(1)
-
ALFIN1
======================================
bZIP_DOF
<---------
ZAT18
<-----
catttagcaatcgaagaagcaattatatttgctggaggcgccacgccgccaccatatgaaacacatattcagtcactagcagtcctctttctttagtgat
18027000
<---------
ARR11(3)
<---------
ARR11(1)
<------
MYB83
<---------
CCA1(2)
--------->
ANAC58
<------
MYB46(1)
<-----------
HVH21
<---------
ZAT6
--------->
ANAC58
<---------
AtMYB61
--------->
ARR14(2)
<----------
DOF2
-----
WOX13(1)
<--------
P
<---------
ARR14(2)
<----------
DOF2
<---------
ANAC58
-->
ATHB12
<---------
ZAT6
<---------
AHL20(2)
----------->
GT1
<---------
ANAC58
-------
CBF
<-----------
RAV1(1)
--------->
At4g35610
--------->
ARR11(3)
<---------
ANAC46
<-
tggcaggcaagttttgtgacttaatagtgttggtgttcatataatctgcagaactgaaatggtcatatctttcttttctgtttgagtgttcatttgggtc
18027100
------>
NtERF2
--------->
GLK1(2)
<-------
GAMYB
<------
ZmHOX2a(1)
<
--------->
MYB52(2)
--------->
HSFB2a(2)
--------->
ZAT14
<---------
MYB46(3)
<---------
HSFB2a(2)
<---------
YAB1
<-----
<-----------
RAV1(1)
<---------
LBD16
--------->
DAG2
<---------
ZAT14
--------
MYB52(1)
<---------
ANAC46
---------->
DOF2
------------>
CBF
tgtttgttgcagcctctgtatcaaacatccaaatttgtttcgaggaagcgagaagcttgatgtttcatgggataaagggttgtatgattccaatgtactg
18027200
----------->
RAV1(1)
<------
NtERF2
--------->
LBD16
--------->
ANAC58
--------->
ANAC58
--------->
SPL7
<---------------------
WRI1
--------->
ATERF1(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(1)
<------
NtERF2
----------->
HVH21
<----------
DOF2
<---------
SPL7
--------->
At4g35610
<---------
ANAC46
<---------
ANAC58
<---------
At4g35610
----
<---------
ANAC58
<---------
ANAC58
--------->
MYB52(1)
<------
<---------
ANAC58
<---------
ANAC46
--------->
ANAC58
----------->
GT1
------
NtERF2
<---------
RAP2.6(2)
--------->
ANAC58
---------->
DOF2
------
RAV1(1)
<---------
AGP1
--------->
ANAC46
<---------------
AtSPL8
--------->
TOE2(3)
-----
gtggcttttaggagacctagacctga
atggcgtccgcaacagtgcttcttcatacaggtactcaactgatcggtgaagctatcttagaaagtgaattttc
18027300
<-------
----------->
HVH21
--------->
SPL7
--------->
ZAT2
<<<<<<<<<
MYB98
--------->
TOE1(1)
<---------
ZAT2
--------->
TOE2(3)
----------->
RAV1(2)
--------->
At4g35610
<---------
YAB1
<---------
AHL20(2)
--------->
ANAC58
<---------
ATHB51
<---------
AHL20(2)
--------->
ANAC58
----------->
AGL15
--------->
AHL20(2)
------>
NtERF2
<-------
-----
GT1
----------->
GT1
<---------
AHL20(1)
--------->
CCA1(2)
<-----------
RAV1(2)
------------>
AG
<-------
TEIL
<-----------
GT1
<----------
DOF2
<-------
TEIL
<---------
At4g35610
caaattatgctatgttaaatacattcaatttttttcaacctg
gtacagcattctctttcgccagagataggggttcatggcaccccagttgacaactttt
18027400
<---------
ANAC58
<---------
MYB46(3)
<---------
ARR11(3)
<------
MYB83
<---------
ANAC46
------
----------->
GT1
<------
MYB46(1)
-------
<---------
AtMYB61
<---------
AtMYB61
------->
GAMYB
<-----------
RAV1(2)
<-------
GAMYB
<---------
ANAC58
--------->
MYB46(3)
--------->
WRKY18(1)
--------->
ARR11(3)
<---------
MYB52(1)
--------->
At4g35610
<-----------
HVH21
<---------
CCA1(2)
<---------
MYB46(3)
----------->
RAV1(1)
---
DOF2
--------->
ALFIN1
<-----------
RAV1(1)
<------
NtERF2
<---------
At4g35610
--
DAG2
<---------
ANAC46
--------->
MYB55(2)
--------->
ZAT18
--------->
At4g35610
ctcggtcagggagtggaggtgtaaatctttctaaattggctgttggtttagacttgagtgagccagcgagttcaaaatggagcagcacaaccagcgtaaa
18027500
<----------
DOF2
---------->
ID1
<-----------
GT1
<-----------
GT1
----------->
GT1
<---------
LBD16
<---------
AHL20(1)
---------->
DOF2
<---------
SPL7
<---------
ARR11(3)
----------->
GT1
<---------
TOE2(3)
--------->
AHL20(1)
<---------
AtMYB61
<-----
--------------->
AtSPL3
--------------->
AtSPL3
<----------
DOF2
<-----------
GT1
--->
DAG2
--------->
LBD16
<---------------
AtSPL8
<---------
ANAC58
<---------
AHL20(2)
--->
DOF2
--------->
LBD16
--------------->
AtSPL8
<---------
ANAC58
<---------
YAB1
gtttgaggtacccggacattaccttcttcagacattgtagtacaatatttttctctttgctgttttttgctttggtgaaaaagagtattattttccattg
18027600
<---------
GLK1(1)
--------->
GLK1(1)
<---------
ARR14(2)
--------->
SPL7
--------->
HSFB2a(2)
<---------
SPL7
<---------
HSFB2a(2)
<---------
PCF2
=====================
HOX2a_HOX2a
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
ANAC58
======================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<-------
TEIL
<------
ZmHOX2a(2)
================
------->
MYC4
--------->
CCA1(2)
--------->
ARR11(3)
<-------
PIF4
--------->
ARR11(3)
<---------
AGP1
------->
PIF4
<---------
AGP1
<---------
ARR14(2)
<-------
MYC3
--------->
SPL7
--------->
ARR14(2)
--------->
ARR14(2)
------->
PIF5
----------->
HVH21
<---------
ARR11(3)
<---------
At4g35610
<-------
PIF5
<---------
SPL7
--------->
AGP1
<-----------
RAV1(2)
<-----
------->
MYC2
--------->
MYB52(1)
<---------
ARR14(2)
--------->
AtLEC2
<---------
GLK1(1)
------->
MYC3
----------->
HVH21
--------->
GLK1(1)
------>
ZmHOX2a(1)
<---------
CCA1(2)
<-------
MYC2
<---------
TOE2(3)
<---------
GLK1(1)
===============================
HOX2a_HOX2a
------
RAV1(1)
--------->
MYB52(1)
<---------
GLK1(1)
--------->
ARR14(2)
--------->
ARR11(3)
-------
gtgcag
catgtgcgtccgattaacgatgacggacgggcgatatcagagatctggacggatttcctataacatgcag
gtgatattggatctcgcttccctt
18027700
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AGI:
At3g48620.1
Description:
chloroplast outer membrane protein-related. similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G44160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70670.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184)
Range:
from: 18027227
to: 18029088
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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