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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                              <-----------GT1
                             <---------AHL20(2)
                            --------->AHL20(2)
                         <---------AHL20(2)                                              <---------DAG2
                        <---------AHL20(1)                                               <----------DOF2
                        --------->AHL20(1)                                            <-----------GT1
                        <---------AHL20(2)                                         --------->YAB1
                        --------->ARR11(3)                                        <---------YAB1
                        <---------ARR11(3)                                  ----------->GT1
  ---------->ID1        --------->AHL20(2)                                 <---------TOE2(2)
------TOE2(3)          --------->AHL20(2)                                  <---------TOE1(2)
-DOF2                --------->AHL20(2)                      <---------TOE2(3)    <---------AHL20(2)
 
agtttgtcttctaacccattctaaaaatatatttaatctctctcacccatagtactgaattacaaaggttttgaatcgaaggtatattataacttttttt  18026800
                                                                                           <--------
                                                                                        --------->ANAC58
                                                                                        --------->ANAC58
                                                                                        --------->REM1(1)
                                                                                        --------->bZIP60(2)
                        --------->YAB1               <----------DOF2                    --------->ANAC46
                       <---------YAB1         --------->At4g35610                      --------->SPL7
                     <---------ICU4           <---------At4g35610---------->DOF2      <---------ATERF1(1)
            --------->ATHB12             <---------LBD16    <-----------GT1----------------------->TaNAC69(2)
           <---------YAB1       <-----------HVH21    <---------DAG2       ----------->GT1------>NtERF2
 
tttttgctaagtttatgatttgcattatgatcagcgttcacatcttcggagctaaactttttttaacaaaaagaacatagtgaatttggctacgccactg  18026900
                                             <---------ALFIN1
                                             --------->DEAR3(1)
                                            --------->ERF1
                                            --------->ATERF1(1)
                                            <------NtERF2
                                           --------->ABI4(1)
                                          --------->ANAC46
                                          --------->RAP2.3(2)
                                          --------->RRTF1(3)
                                          <---------ATERF1(2)
                                          --------->DEAR3(1)
                                          --------->ATERF1(2)
                                          --------->RAP2.6(2)
                                          --------->RRTF1(2)
                                          --------->RAP2.3(3)
                                         --------->ORA47(2)
                                         --------->ERF1
                                         --------->RAP2.3(1)
                                         --------->RRTF1(1)
                                        ------>NtERF2
                                        <---------ATERF1(1)
                                       --------->ANAC58
                                       --------->O2
                                       <---------ALFIN1
                                       --------->TGA1a
                                       --------->ANAC58
                                       --------->bZIP60(2)
                                     --------->DEAR3(1)
                                     <---------ATERF1(1)
                                    <------NtERF2
                                    --------->ATERF1(1)
                                   <-----------HVH21
                                   <---------ATERF1(1)
                                   <---------RAP2.3(1)
                                  --------->ANAC58
                                  --------->ANAC46
                                  --------->RAP2.3(2)
                                  --------->PCF2
                                 --------->ATERF1(1)
                                 --------->RAP2.3(1)
                                 --------->RRTF1(1)
                                <---------RAP2.3(1)
                                <---------ERF1----------->RAV1(1)
                                <---------ATERF1(1)
                     <---------YAB1------>NtERF2
                    <---------AHL20(1) --------->ANAC46
                    <---------AHL20(2) <---------O2
                    --------->AHL20(1)------>NtERF2
                   --------->YAB1<------NtERF2------>NtERF2
                   --------->AHL20(2)<---------ALFIN1
                --------->WOX13(1)--------->ANAC58                                             <----
             --------->ANAC58  <---------RAP2.3(3)                                           -------
             --------->ANAC58  <---------DEAR3(1)                                      <----------DOF2
           ---------->DOF2 <---------ANAC58<---------ATERF1(1)                     <----------DOF2
    --------->WOX13(1)     <---------ANAC58------>NtERF2                         ------>ZmHOX2a(1)
-ALFIN1    ======================================bZIP_DOF                      <---------ZAT18<-----
 
catttagcaatcgaagaagcaattatatttgctggaggcgccacgccgccaccatatgaaacacatattcagtcactagcagtcctctttctttagtgat  18027000
                                                              <---------ARR11(3)
                                                              <---------ARR11(1)
                           <------MYB83                      <---------CCA1(2)
 --------->ANAC58          <------MYB46(1)               <-----------HVH21        <---------ZAT6
 --------->ANAC58         <---------AtMYB61    --------->ARR14(2)    <----------DOF2
-----WOX13(1)            <--------P            <---------ARR14(2)<----------DOF2<---------ANAC58
-->ATHB12              <---------ZAT6<---------AHL20(2) ----------->GT1         <---------ANAC58
-------CBF             <-----------RAV1(1) --------->At4g35610--------->ARR11(3)<---------ANAC46  <-
 
tggcaggcaagttttgtgacttaatagtgttggtgttcatataatctgcagaactgaaatggtcatatctttcttttctgtttgagtgttcatttgggtc  18027100
       ------>NtERF2                             --------->GLK1(2)
 <-------GAMYB                          <------ZmHOX2a(1)                                          <
--------->MYB52(2)                   --------->HSFB2a(2)                                  --------->ZAT14
<---------MYB46(3)                   <---------HSFB2a(2)                        <---------YAB1<-----
<-----------RAV1(1)                  <---------LBD16                  --------->DAG2      <---------ZAT14
--------MYB52(1)                    <---------ANAC46                 ---------->DOF2 ------------>CBF
 
tgtttgttgcagcctctgtatcaaacatccaaatttgtttcgaggaagcgagaagcttgatgtttcatgggataaagggttgtatgattccaatgtactg  18027200
                                 ----------->RAV1(1)
                               <------NtERF2
                               --------->LBD16
                              --------->ANAC58
                              --------->ANAC58
                             --------->SPL7                         <---------------------WRI1
                            --------->ATERF1(1)                   ------>ZmHOX2a(2)
       <------ZmHOX2a(1)    <------NtERF2                     ----------->HVH21
 <----------DOF2           <---------SPL7                   --------->At4g35610
<---------ANAC46          <---------ANAC58                  <---------At4g35610                 ----
<---------ANAC58          <---------ANAC58                 --------->MYB52(1)                <------
<---------ANAC58          <---------ANAC46              --------->ANAC58             ----------->GT1
------NtERF2              <---------RAP2.6(2)           --------->ANAC58           ---------->DOF2
------RAV1(1)   <---------AGP1--------->ANAC46     <---------------AtSPL8     --------->TOE2(3)-----
 
gtggcttttaggagacctagacctgaatggcgtccgcaacagtgcttcttcatacaggtactcaactgatcggtgaagctatcttagaaagtgaattttc  18027300
                                                                                            <-------
                                                                                     ----------->HVH21
                                        --------->SPL7                             --------->ZAT2
          <<<<<<<<<MYB98             --------->TOE1(1)                             <---------ZAT2
         --------->TOE2(3)        ----------->RAV1(2)                              --------->At4g35610
   <---------YAB1         <---------AHL20(2)                                  --------->ANAC58
<---------ATHB51         <---------AHL20(2)                                   --------->ANAC58
----------->AGL15        --------->AHL20(2)                                  ------>NtERF2  <-------
-----GT1----------->GT1  <---------AHL20(1)                    --------->CCA1(2) <-----------RAV1(2)
------------>AG <-------TEIL <-----------GT1       <----------DOF2    <-------TEIL <---------At4g35610
 
caaattatgctatgttaaatacattcaatttttttcaacctggtacagcattctctttcgccagagataggggttcatggcaccccagttgacaactttt  18027400
                                                    <---------ANAC58
                                        <---------MYB46(3)
                    <---------ARR11(3)  <------MYB83<---------ANAC46                          ------
               ----------->GT1          <------MYB46(1)                                      -------
            <---------AtMYB61          <---------AtMYB61                               ------->GAMYB
  <-----------RAV1(2)                <-------GAMYB  <---------ANAC58                  --------->MYB46(3)
 --------->WRKY18(1)--------->ARR11(3)<---------MYB52(1)                        --------->At4g35610
<-----------HVH21  <---------CCA1(2)<---------MYB46(3)                         ----------->RAV1(1)
---DOF2  --------->ALFIN1           <-----------RAV1(1)      <------NtERF2   <---------At4g35610
--DAG2 <---------ANAC46             --------->MYB55(2) --------->ZAT18       --------->At4g35610
 
ctcggtcagggagtggaggtgtaaatctttctaaattggctgttggtttagacttgagtgagccagcgagttcaaaatggagcagcacaaccagcgtaaa  18027500
                                                   <----------DOF2
                                               ---------->ID1
               <-----------GT1                <-----------GT1                  ----------->GT1
       <---------LBD16                    <---------AHL20(1)               ---------->DOF2
   <---------SPL7                         <---------ARR11(3)         ----------->GT1
 <---------TOE2(3)                        --------->AHL20(1)        <---------AtMYB61         <-----
 --------------->AtSPL3          --------------->AtSPL3           <----------DOF2       <-----------GT1
--->DAG2 --------->LBD16         <---------------AtSPL8          <---------ANAC58    <---------AHL20(2)
--->DOF2--------->LBD16          --------------->AtSPL8          <---------ANAC58  <---------YAB1
 
gtttgaggtacccggacattaccttcttcagacattgtagtacaatatttttctctttgctgttttttgctttggtgaaaaagagtattattttccattg  18027600
                                                       <---------GLK1(1)
                                                       --------->GLK1(1)
                                                      <---------ARR14(2)
           --------->SPL7                      --------->HSFB2a(2)
         <---------SPL7                        <---------HSFB2a(2)
         <---------PCF2                       =====================HOX2a_HOX2a
        <---------ANAC58                      ------>ZmHOX2a(2)
        <---------ANAC58                     ======================HOX2a_HOX2a      ------>ZmHOX2a(2)
       <-------TEIL                          <------ZmHOX2a(2)                      ================
     ------->MYC4                            --------->CCA1(2)                    --------->ARR11(3)
     <-------PIF4                           --------->ARR11(3)                    <---------AGP1
     ------->PIF4                           <---------AGP1                        <---------ARR14(2)
     <-------MYC3           --------->SPL7  --------->ARR14(2)                    --------->ARR14(2)
     ------->PIF5         ----------->HVH21 <---------ARR11(3)         <---------At4g35610
     <-------PIF5         <---------SPL7    --------->AGP1           <-----------RAV1(2)      <-----
     ------->MYC2      --------->MYB52(1)   <---------ARR14(2)     --------->AtLEC2<---------GLK1(1)
     ------->MYC3     ----------->HVH21    --------->GLK1(1)------>ZmHOX2a(1)    <---------CCA1(2)
     <-------MYC2 <---------TOE2(3)        <---------GLK1(1)===============================HOX2a_HOX2a
------RAV1(1)    --------->MYB52(1) <---------GLK1(1) --------->ARR14(2)   --------->ARR11(3)-------
 
gtgcagcatgtgcgtccgattaacgatgacggacgggcgatatcagagatctggacggatttcctataacatgcaggtgatattggatctcgcttccctt  18027700
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AGI:  At3g48620.1   
Description:  chloroplast outer membrane protein-related. similar to chloroplast outer membrane protein-related [Arabidopsis thaliana] (TAIR:AT3G44160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70670.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184)
Range:  from: 18027227    to: 18029088    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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