Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------ATHB12                                                            <---------ARR14(2)                                                            --------->ARR14(2)                                                           --------->GLK1(1)                                         <----------DOF2   <---------GLK1(1)                                         <---------DAG2    <---------CCA1(2)                                --------->ANAC58          ---------->TaMYB80--------->YAB1            ------->TEIL        --------->ANAC58  <----------DOF2        --------->WOX13(1)        --           <-----------GT1    ---------->DOF2 <----------DOF2         ------->TEIL      ---------->DOF2   cagactcacctttgaaccccattcacctcttataaagccactgcttttctttctttttggcatatccacttgcatctatcattttttatgtaaagtcatt  17721000                                                                                <---------ICU4                 --------->YAB1                                                <---------AHL20(2)             <---------YAB1                                           --------->YAB1           <-----------GT1                                            <---------AHL20(2)          <---------YAB1                                              <--------ATHB1        --------->YAB1                                                <---------ICU4---------->DOF2        -------->HAHB4                                                --------->AHL20(2)   <------NtERF2        -------->ATHB1                                      <---------At4g35610--------->AHL20(2)        <--------HAHB4                                      <---------ZAT2     <---------ATHB51        --------->ATHB51        ------>ZmHOX2a(1)           --------->ZAT2 --------->AHL20(2)        <---------ICU4         <---------ANAC58      --------->AHL20(2)    <---------AHL20(2)       <---------YAB1      <------MYB83              --------->YAB1  --------->ICU4--------->AHL20(2)       <---------ATHB51    <------MYB46(1)          <---------AHL20(2)<---------AHL20(1)--------->RAP2.6(3)       --------->ICU4     --------->MYB59        <---------AHL20(2)  <---------YAB1<---------AHL20(2)   <---------MYB52(1)    <--------P        --------->YAB1   --------->At4g35610--------->ICU4 ---->ZmHOX2a(1)<---------YAB1 <---------ANAC58 --------->AHL20(2) --------->YAB1 <---------YAB1   cctctgttaattattactataatacatgtaggtccttgttcttaatcagattaaataatatcagctgaataataattttaaataattaaagtcggcattt  17721100               ----------->HVH21             ----------->GT1             <------MYB46(1)             <------MYB83          >>>>>>>>>SARD1                                                           --------->ANAC58          >>>>>>>>>CBP60g                                        <---------ARR11(3)--------->ANAC58   ----------->GT1    --------->YAB1                    ---------->DOF2   <---------ICU4    <--------  --------->ALFIN1    --------->AHL20(2)           ---------->DOF2    --------->MYB46(3)   <---------ATHB12   tagagtggtgaaatttggtgacaattatatcaaaaactcttcacattttttaaaaaagaaaagacaatatcaacaactattacacaagaaaaaatcattc  17721200            --------->MYB52(1)        --------------->AGL15        <---------------AGL15       <-----------------AGL3       <-----------------AGL2       ----------------->AGL2                           <----------DOF2       <-----------------AGL1                       <---------ALFIN1                       --------->ANAC58       ----------------->AGL1                    <-----------GT1                           --------->ANAC46       ----------------->AG                      --------->ARR11(3)                   <---------bZIP60(1)     --------->AtLEC2                            --------->ARR14(2)                   --------->bZIP60(1)     --------->ANAC46                       --------->AHL20(2)  <---------YAB1        <---------TGA2(1)     --------->ANAC58             <---------ZAT6--------->CCA1(1)                     --------->TGA2(1)     --------->ANAC58      <---------MYB52(1)   --------->RVE1(1) --------->WOX13(1)  --------->REM1(1)   <---------ANAC58 <---------ANAC58      ----------->GT1     <---------CCA1(2)     <-----------GT1   <---------ANAC58 <---------ANAC58    ---------->DOF2<---------DAG2            <---------ZAT6  ---- -ICU4 ----------------->AGL3     ----------->GT1<---------ARR14(2)        <-----------GT1 --------->ANAC58   tggttccatgccataaacggtagcatgcccttagtagtgtcaaaaagaaaatatccacctttgtatatcattcattttaactggtgttacatcacaccat  17721300                                                                                        ---------->DOF2                                                                                    --------->YAB1                                                                              <---------------AGL15                                            <---------ALFIN1                  ----------------->AGL1                                           <---------ZAT18                    ----------------->AG                                           --------->ZAT18    <-----------GT1 --------------->AGL15             --------->ZAT6           <------------CBF     *TSS               --------->TOE2(3)  <---------AHL20(1)         <---------MYB46(3)           <----------DOF2    ----------------->AGL2 ----->AHL20(2)   <-----------ARR10 <---------YAB1<----------DOF2       <-----------HVH21    --------   ataatatatgtattaacacaaatctcagtgtttgttatatcattgtccacttctttctctcttttctctctctctgtcatccctaattagaaaagaaaag  17721400                                                                                            ------>NtERF2                                                                                           --------->ANAC46                                                                                           --------->LBD16                                                              <---------ANAC58           --------->RAP2.6(3)                                <-----------GT1               <---------ANAC58           --------->SPL7                            <---------CCA1(1)          -------->P                        <---------LBD16                            <---------RVE1(1)         ------->GAMYB   <---------LBD16   ------>MYB83                           <---------ARR11(3)        <---------MYB111(2)                --------->MYB52(1)                           --------->ARR11(3)        <---------MYB55(2)   ----------->HVH21------>NtERF2 -->DOF2          <----------DOF2  --------->TOE2(3) --------->MYB46(3) --------->LBD16 ------>MYB46(1)   aagggaacatatttttgagtctttgttgagatatttacatcaaaacactctctcaacaaccatggcttcgcttccggtgaagcctctaccttccggccac  17721500                --------->GLK1(2)               <---------GLK1(2)                         --------->DAG2              <------NtERF2                     --------->MYB52(2)             --------->LBD16 --------->LBD16    <---------MYB46(3)            --------->RAP2.6(2)                 <------MYB83            --------->ANAC46 ------>NtERF2      <------MYB46(1)           <---------LBD16  --------->ANAC46   <---------AtMYB61                                  ---     <-------TEIL          <---------LBD16    <---------MYB52(1)                      <---------TOE1(3)  <---------At4g35610  <---------ICU4      <------------AtMYB77<---------ALFIN1 --------------->AGL15  --------->At4g35610 <---------YAB1  --------->YAB1   ---------->DOF2   <------ZmHOX2a(1)   --------   ttacagcttcatagccggaatcttattattccgccatcaatggtaaccgttggtttcaaaaggcatcacttcttaggagtctcttcttatggtttatgta  17721600                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                      <---------ANAC46                                                                      --------->O2                                                                      <---------TGA1a                                                                      <---------O2                                                                      --------->TGA1a                                                                     <------NtERF2                                                                    --------->LBD16                                                                    <---------ATERF1(1)                                                                    ------>NtERF2  --------->ATERF1(1)                                                                   <---------DEAR3(1)                                                                   --------->DEAR3(1)                                                                   --------->ATERF1(2)                                                                   <---------ATERF1(2)           <---                                                                   --------->RAP2.3(2)         <-----                                                                   --------->RAP2.3(3)      ------>ZmHOX2a(1)                                                                  --------->ATERF1(1)  <---------ANAC58                                                  <---------ANAC46<------NtERF2    <---------MYB52(1)                                                 <------NtERF2    --------->RAP2.3(1)  <---------ANAC58                                                ------>NtERF2     <---------LBD16<---------DEAR3(1)                                               <---------DEAR3(1) --------->ORA47(2)  <------NtERF2                                               <---------At1g77200--------->ERF1 <---------ATERF1(2)                                             <-----------HVH21   <---------ATERF1(1) ------>NtERF2                                           <---------ATHB12      <---------RAP2.3(1) <---------MYB46(3)    ------->TEIL                      --------->ANAC58       --------->DAG2      <---------DREB2C(2)    --------->GLK1(2)                 --------->ANAC58      ====================bZIP_DOF    <-------- ------>ICU4                       <------NtERF2<---------DEAR3(2)--------->DEAR4(2) --------->ABI4(2) ->ANAC55(2)                     <---------DEAR3(1)         ---------->DOF2     <---------LBD16------   ttgatgaatctgtaaggcatatgagaagcctaaggtcgtcgagcaatcgtcggcgagtaagtaaaagcgccggcgtgtctatgccggtggcttcctctga  17721700                                                                       ======================RAV                                                                   <-----------HVH21                                                                  --------->O2                                                                  --------->bZIP60(1)                                                                  <---------TGA2(1)                                                                  --------->ANAC58                                                                  --------->bZIP60(2)                                                                  <---------bZIP60(1)                                                                  --------->ANAC55(2)                                                                  <---------ANAC55(2)                                                                  <---------bZIP60(2)                                                                  <---------ANAC46                                                                  --------->ANAC58                                                                  --------->TGA2(1)                                                          <----------CDC5                                                          ==================MYC_MYB                                                         --------->At4g35610<---------ANAC58                                                         <---------At4g35610<---------ANAC46                                                        <---------DEAR3(1)  <---------ANAC58                                                      <-----------HVH21----------->RAV1(2)                                                     --------->DEAR3(1)--------->At4g35610                                                 <------NtERF2    <---------TGA1a                                                 --------->ATERF1(1)--------->TGA2(2)                                                --------->ABI4(2) <---------O2                                                <---------MYB46(3)>>>>>>>>>>HY5                                                <---------ATERF1(1)<-----------TGA1                                            <---------DEAR3(1)    --------->TGA1a  <-----------RAV1(2)              <---------ANAC58      ---------->DOF2 <------NtERF2<-----------STF1 <---------At4g35610       <---------At4g35610          ========================================bZIP_DOF ----------->GT1 ------YAB1   <---------ANAC46    <------NtERF2<---------DEAR3(1)----------->STF1 <---------ZAT2 ----At4g35610<---------ANAC58   --------->LBD16------>NtERF2  ----------->HVH21 ----------->RAV1(1) -At4g35610<---------ARR14(2)   --------->RAP2.6(2) --------->ATERF1(1)<---------At4g35610      ----- --->YAB1<---------MYB46(3)    <---------LBD16 --------->ALFIN1----------->TGA1--------->At4g35610   tgattttccagcggtttcttgggagtcttggaagccggaaaagaccacggtggctccgtcgctgagtgacgtcatctggcctgcagcaggtaaattagta  17721800                                     <---------AHL20(2)                                    --------->AHL20(2)                                   <---------YAB1                                <---------YAB1                                <---------AHL20(2)                                --------->ICU4                              <---------RVE1(1)                             <---------ARR11(3)                             --------->ARR11(3)                                              <-------                         --------->LBD16                                                   --------->ATHB12                       <---------LBD16                       <---------ZAT6       --------->AHL20(2) ------>GT1     <---------ICU4<---------CCA1(1)  ----------->GT1     <----------DOF2      <---------YAB1   gttaaactgaatcactaatctttgcaccggagatattattatatgctcattttgttacaaatagtcttagactttgatataaaaaaaaattcttgattgg  17721900  Previous    Next  AGI:  At3g47980.1    Description:  integral membrane HPP family protein. similar to integral membrane HPP family protein [Arabidopsis thaliana] (TAIR:AT5G62720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62501.1); contains InterPro domain HPP (InterPro:IPR007065) Range:  from: 17721359    to: 17723851    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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