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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
AHL20(2)
----------->
GT1
<---------
DAG2
----------->
GT1
<-------
<---------------
AGL15
--------->
AtMYB61
--------->
AHL20(2)
---------->
DOF2
--------------->
AGL15
----------->
GT1
--------->
AHL20(1)
=================
<-----------
GT1
--------->
AHL20(2)
--------->
AHL20(2)
<------
ZmHOX2a(2)
tttttaacaaatagagaaaacaattaagtagttaaaacaccttaccaaaaaaaaaattaagtagttaaaacaatacaatatagtggatcaaaggagagtt
17703300
<---------
ICU4
--------->
ICU4
<---------
TOE2(3)
--------->
YAB1
<---------
YAB1
--------->
TOE1(1)
<------
ZmHOX2a(1)
<---------
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
<---------
ICU4
----
<-------
TEIL
<---------
CCA1(2)
<---
--------->
AHL20(2)
--------->
At4g35610
--------->
YAB1
------>
MYB83
<------
ZmHOX2a(1)
<---------
AHL20(2)
--------->
TOE2(3)
<---------
ANAC55(2)
------>
MYB46(1)
--
ZAT6
--------->
LBD16
--------->
AHL20(2)
--------->
ANAC55(2)
--------->
WOX13(1)
=======
HOX2a_HOX2a
--------->
AHL20(2)
--------->
WOX13(1)
<---------
CCA1(2)
--------->
ICU4
--------
acaggaaaaatttccgagtatttttatatatcgtttttgtatcaattacattagatgcagtatatctcgtatcatagtaataaggattaccaatccaaag
17703400
<-------
MYC2
<-------
MYC3
------->
MYC3
--------->
AHL20(2)
------->
MYC2
<---------
ARR11(3)
--------->
ARR14(2)
<---------
AHL20(2)
<---------
ARR14(2)
<---------
AHL20(1)
------->
TEIL
--------->
ARR11(3)
--------->
ANAC55(2)
<------
MYB46(1)
<---------
ANAC55(2)
----------->
GT1
--------->
ANAC58
<------
MYB83
--------->
ANAC58
--------->
ANAC55(2)
------->
TEIL
--------->
MYB111(2)
--------->
SPL7
--------->
MYB59
--------->
ZAT14
<-------
TEIL
--------->
MYB111(1)
-----
<---------
ZAT14
<---------
SPL1(1)
<---------
ANAC58
<----
----------->
GT1
<-----------
RAV1(1)
--------->
SPL1(1)
<---------
ANAC58
<---------
AHL20(2)
<------
ZmHOX2a(1)
<---------
ICU4
<---------
SPL7
<----------
DOF2
--------->
AHL20(1)
<-----
----->
ALFIN1
--------->
YAB1
<---------------
AtSPL3
--------->
MYB46(2)
<-----
------
REM1(1)
--------->
ICU4
--------------->
AtSPL3
<---------
MYB55(1)
--------->
TOE1(2)
-->
DOF2
<---------
AHL20(2)
------------------>
SPL14
<--------
P
--------->
AHL20(2)
<-
tgtaggatgaaaaaattgtaatcagtgttgtccctaatagtactatccgtacgtatccatgtgctttcttggtaggtaatatattaaataacattcgata
17703500
--------->
YAB1
--------->
ICU4
--------------->
AGL15
<---------------
AGL15
==================================
MADS_MADS
--------->
AHL20(2)
----------------->
AGL3
<---------
MYB52(1)
----------------->
AGL2
--------->
LBD16
------>
NtERF2
--------->
ANAC46
<---------
ATERF1(2)
<---------------
AtSPL3
--------->
ATERF1(2)
<---------
ANAC46
--------->
ANAC58
<---------
LBD16
<---------
At4g35610
--------->
ANAC58
---->
ARR11(3)
--------->
ZAT2
--------------->
AtSPL8
<---------
WOX13(1)
-----
ARR11(3)
<---------
ZAT2
<---------------
AtSPL8
<---------
AHL20(2)
----
CCA1(2)
<---------
AHL20(2)
--------->
MYB52(2)
--------->
YAB1
--------->
AHL20(2)
----
GLK1(1)
<---------
YAB1
<--------
P
--------->
ZAT18
<----------
DOF2
<-----------
GT1
---------
DOF2
--------->
At4g35610
--------->
SPL7
<-----------------
AGL3
<----------
DOF2
tctttaccggcatttttattaagctgcctggttagtagtaagtacgccattaatagtaatctctttaattggtctctaaatacacttttatactatttcc
17703600
----------->
GT1
---------->
DOF2
--------->
GLK1(2)
<---------
ARR14(2)
-----
----------->
TGA1
---------->
DOF2
<----
<----------
DOF2
----------->
HVH21
<-----------
HVH21
---------
<---------
TOE2(3)
<---------
SPL7
------------------------>
ANAC81
--------->
YAB1
<---------
AHL20(2)
----------->
RAV1(2)
--------->
LBD16
*
TSS
<---------
YAB1
--------->
AHL20(2)
<---------
MYB46(3)
--------->
ARR14(2)
<---------
MYB46(3)
-----
--------->
YAB1
<---------
YAB1
--------->
RVE1(1)
<------------
CBF
--------->
WRKY38(1)
--
ctattaaaataaggcttttatgtttgttcgcctgacgcttgaaaaaatccgtcaaaagaaagaaaattgagtcttatttgttgact
gtgtctcataataa
17703700
<---------
MYB46(3)
----------->
RAV1(1)
<---------
ARR14(2)
---->
DAG2
--------->
ANAC46
<------
ZmHOX2a(1)
-----
TOE2(3)
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
MYB59
>
YAB1
<-----------
GT1
------>
ZmHOX2a(1)
<<<<<<<<<
MYB98
---->
MYB59
<---------
YAB1
--------->
YAB1
<---------
SPL7
------------>
MYB.PH3(2)
-------
------->
ALFIN1
<-----------
GT1
---------->
ID1
---------->
DOF2
--------->
ARR14(2)
ggtagtgccactactactatagcggttttatcatcttctacgcttcgatttcgtcgtcctcctcccaacaaagtttgttaggaaacgaatactcgaacag
17703800
<---------
WRKY45
<---------
WRKY38(1)
<---------
WRKY12
--------->
ARR14(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
----------------->
AGL1
<-----------------
AGL1
--------->
KAN4(2)
--------->
HSFB2a(1)
<---------
KAN4(1)
<---------
MYB46(3)
---
<---------
MYB52(1)
<------
<-------
TEIL
<---------
YAB1
--------->
WRKY18(1)
<---------
GLK1(1)
--------->
SPL1(2)
<----------
DOF2
<---------
ARR14(2)
<---------
GLK1(2)
--------->
SPL7
<---------
TOE1(3)
<---------
MYB52(1)
<---------
ANAC46
<----------
-->
MYB46(3)
<---------
SPL7
<---------
MYB52(1)
<-----------------
AGL2
--------->
ICU4
<----
ccatttcttctctatttctcg
gtacggagtttcatccgttaagctttccgattgttccgtttctggtcaactattttggtgtaattttggattttccttt
17703900
----
<---------
ANAC46
<-----
<---------
ANAC58
------
<---------
ANAC58
<---------
YAB1
--------
<-----------
GT1
<-----------
RAV1(1)
<---------
ICU4
<-------
------->
ID1
<---------
YAB1
<---------
AtLEC2
--------->
YAB1
<---------
ANAC46
----
DOF2
<---------
AHL20(2)
<----------
DOF2
<---------
ATHB12
--------->
ZAT14
-
GT1
<----------
DOF2
--------->
ZAT6
--------->
YAB1
<---------
ZAT14
-------
RAV1(1)
<---------
YAB1
--------->
YAB1
--------->
GLK1(1)
<---------
AHL20(2)
----
gttgtttcgcttctttttattgttgcttgagttctatcactatgctttcatggagaattcttggataatcatgctggtgttttatttcggtgcag
tgcg
a
17704000
<-------
TEIL
----------->
GT1
<---------------
AtSPL8
------>
NtERF2
--------->
ARR14(2)
------->
HVH21
<---------
ARR14(2)
----
At4g35610
<---------
AGP1
----------->
GT1
--->
At4g35610
====================================
HOX2a_HOX2a
<---------
AHL20(2)
->
ZAT14
<---------
HSFB2a(2)
--------->
ETT(2)
<----------
DOF2
--
ZAT14
--------->
ALFIN1
------>
ZmHOX2a(1)
<---------
ETT(2)
<---------
AHL20(2)
------->
TGA1
<------
ZmHOX2a(1)
---------->
DOF2
------>
ZmHOX2a(2)
----------->
GT1
-
tgacgacgactgtggaggacaatcgcgaggtcctcgaggctgttttgaaagaagcggtcgatctg
gtacatattttctttagtaaatttgtgaaactttg
17704100
--------------->
AGL15
<-----
<------
ZmHOX2a(1)
------
--------->
LBD16
--------->
ANAC58
-
--------->
HSFB2a(2)
--------->
ANAC58
-
<---------
LBD16
<---------
REM1(1)
--------->
ZAT6
<---------
HSFB2a(2)
<---------
GLK1(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------------
AGL15
--------->
GLK1(2)
<---------
ARR11(3)
<---------
AHL20(2)
----------------->
AGL3
--------->
ARR14(2)
<------
MYB46(1)
---------->
GT1
<---------
ANAC46
----------------->
AGL1
<---------
ARR14(2)
<------
MYB83
-
taagggaaaatggtctgagattgtgtttaaatttccag
gaaaatgtgccaattgaagaagtatttgagaatctgagatgtagcaaggaaggtctcactac
17704200
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AGI:
At3g47950.1
Description:
AHA4 (Arabidopsis H(+)-ATPase 4); ATPase. Identical to ATPase 4, plasma membrane-type (AHA4) [Arabidopsis Thaliana] (GB:Q9SU58;GB:Q8GXR3); similar to AHA8 (ARABIDOPSIS H(+)-ATPASE 8), ATPase [Arabidopsis thaliana] (TAIR:AT3G42640.1); similar to AHA11 (ARABIDOPSIS H(+)-ATPASE 11), ATPase [Arabidopsis thaliana] (TAIR:AT5G62670.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to plasma membrane H+-ATPase [Juglans regia] (GB:AAQ55291.1); similar to plasma membrane H+ ATPase [Prunus persica] (GB:CAB69824.1); similar to Plasma membrane ATPase 1 (Proton pump 1) (GB:Q08435); contains InterPro
Range:
from: 17703687
to: 17708984
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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