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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                 --------->AHL20(2)
                                                 <---------AHL20(2)
        ----------->GT1             <---------DAG2        ----------->GT1                   <-------
   <---------------AGL15            --------->AtMYB61--------->AHL20(2)              ---------->DOF2
   --------------->AGL15 ----------->GT1         --------->AHL20(1)                =================
 <-----------GT1    --------->AHL20(2)          --------->AHL20(2)                 <------ZmHOX2a(2)
 
tttttaacaaatagagaaaacaattaagtagttaaaacaccttaccaaaaaaaaaattaagtagttaaaacaatacaatatagtggatcaaaggagagtt  17703300
                                                                                <---------ICU4
                                                                               --------->ICU4
                                                                              <---------TOE2(3)
                                                                          --------->YAB1
                                                                   <---------YAB1
                                                               --------->TOE1(1)<------ZmHOX2a(1)
                                                           <---------ARR11(3)--------->YAB1
                                                           --------->ARR11(3)<---------ICU4     ----
                                                    <-------TEIL <---------CCA1(2)              <---
                    --------->AHL20(2)           --------->At4g35610--------->YAB1      ------>MYB83
<------ZmHOX2a(1) <---------AHL20(2)         --------->TOE2(3) <---------ANAC55(2)      ------>MYB46(1)
--ZAT6     --------->LBD16                --------->AHL20(2)   --------->ANAC55(2)     --------->WOX13(1)
=======HOX2a_HOX2a--------->AHL20(2)   --------->WOX13(1) <---------CCA1(2) --------->ICU4  --------
 
acaggaaaaatttccgagtatttttatatatcgtttttgtatcaattacattagatgcagtatatctcgtatcatagtaataaggattaccaatccaaag  17703400
                                                        <-------MYC2
                                                        <-------MYC3
                                                        ------->MYC3        --------->AHL20(2)
                                                        ------->MYC2        <---------ARR11(3)
                                                  --------->ARR14(2)        <---------AHL20(2)
                                                  <---------ARR14(2)        <---------AHL20(1)
                                                  ------->TEIL              --------->ARR11(3)
                                               --------->ANAC55(2)    <------MYB46(1)
                                               <---------ANAC55(2)    ----------->GT1
                                               --------->ANAC58       <------MYB83
                                               --------->ANAC58       --------->ANAC55(2)
                                              ------->TEIL           --------->MYB111(2)
                                              --------->SPL7         --------->MYB59
                      --------->ZAT14         <-------TEIL           --------->MYB111(1)       -----
                      <---------ZAT14        <---------SPL1(1) <---------ANAC58                <----
   ----------->GT1   <-----------RAV1(1)     --------->SPL1(1) <---------ANAC58  <---------AHL20(2)
 <------ZmHOX2a(1)<---------ICU4            <---------SPL7  <----------DOF2 --------->AHL20(1)<-----
----->ALFIN1--------->YAB1                <---------------AtSPL3     --------->MYB46(2)       <-----
------REM1(1)    --------->ICU4           --------------->AtSPL3    <---------MYB55(1)  --------->TOE1(2)
-->DOF2 <---------AHL20(2)              ------------------>SPL14    <--------P  --------->AHL20(2)<-
 
tgtaggatgaaaaaattgtaatcagtgttgtccctaatagtactatccgtacgtatccatgtgctttcttggtaggtaatatattaaataacattcgata  17703500
                                                  --------->YAB1
                                             --------->ICU4
                                           --------------->AGL15
                                           <---------------AGL15
                                          ==================================MADS_MADS
          --------->AHL20(2)              ----------------->AGL3
     <---------MYB52(1)                   ----------------->AGL2
    --------->LBD16  ------>NtERF2      --------->ANAC46
   <---------ATERF1(2)             <---------------AtSPL3
   --------->ATERF1(2)<---------ANAC46  --------->ANAC58
  <---------LBD16 <---------At4g35610   --------->ANAC58
---->ARR11(3)     --------->ZAT2   --------------->AtSPL8       <---------WOX13(1)
-----ARR11(3)     <---------ZAT2   <---------------AtSPL8    <---------AHL20(2)
----CCA1(2)<---------AHL20(2)--------->MYB52(2)--------->YAB1--------->AHL20(2)
----GLK1(1)<---------YAB1  <--------P  --------->ZAT18     <----------DOF2            <-----------GT1
---------DOF2     --------->At4g35610  --------->SPL7     <-----------------AGL3 <----------DOF2
 
tctttaccggcatttttattaagctgcctggttagtagtaagtacgccattaatagtaatctctttaattggtctctaaatacacttttatactatttcc  17703600
                                                        ----------->GT1
                                                      ---------->DOF2
                                          --------->GLK1(2)
                                          <---------ARR14(2)                                   -----
                            ----------->TGA1      ---------->DOF2                              <----
           <----------DOF2  ----------->HVH21 <-----------HVH21                            ---------
       <---------TOE2(3)    <---------SPL7------------------------>ANAC81               --------->YAB1
 <---------AHL20(2)       ----------->RAV1(2) --------->LBD16                         *TSS<---------YAB1
 --------->AHL20(2) <---------MYB46(3)    --------->ARR14(2)              <---------MYB46(3)   -----
--------->YAB1  <---------YAB1           --------->RVE1(1)   <------------CBF--------->WRKY38(1)  --
 
ctattaaaataaggcttttatgtttgttcgcctgacgcttgaaaaaatccgtcaaaagaaagaaaattgagtcttatttgttgactgtgtctcataataa  17703700
                                                                       <---------MYB46(3)
                                                              ----------->RAV1(1)   <---------ARR14(2)
---->DAG2                                                  --------->ANAC46  <------ZmHOX2a(1)
-----TOE2(3)                        --------->ANAC46      ------>ZmHOX2a(1)--------->MYB59
>YAB1                    <-----------GT1               ------>ZmHOX2a(1) <<<<<<<<<MYB98
---->MYB59  <---------YAB1 --------->YAB1          <---------SPL7   ------------>MYB.PH3(2)  -------
------->ALFIN1          <-----------GT1          ---------->ID1  ---------->DOF2    --------->ARR14(2)
 
ggtagtgccactactactatagcggttttatcatcttctacgcttcgatttcgtcgtcctcctcccaacaaagtttgttaggaaacgaatactcgaacag  17703800
                                                               <---------WRKY45
                                                               <---------WRKY38(1)
                                                               <---------WRKY12
                                                        --------->ARR14(2)
                                                     <---------ANAC58
                                                     <---------ANAC46
                                                     <---------ANAC58
                                                    ----------------->AGL1
                                                    <-----------------AGL1
                                                 --------->KAN4(2)
                                                --------->HSFB2a(1)
                                                <---------KAN4(1)
                                                <---------MYB46(3)                               ---
                                              <---------MYB52(1)                             <------
                           <-------TEIL     <---------YAB1    --------->WRKY18(1)      <---------GLK1(1)
                   --------->SPL1(2)    <----------DOF2 <---------ARR14(2)            <---------GLK1(2)
                   --------->SPL7    <---------TOE1(3) <---------MYB52(1)<---------ANAC46<----------
-->MYB46(3)      <---------SPL7   <---------MYB52(1)<-----------------AGL2      --------->ICU4 <----
 
ccatttcttctctatttctcggtacggagtttcatccgttaagctttccgattgttccgtttctggtcaactattttggtgtaattttggattttccttt  17703900
                                                                                                ----
                     <---------ANAC46                                                         <-----
                     <---------ANAC58                                                         ------
                     <---------ANAC58                              <---------YAB1           --------
 <-----------GT1<-----------RAV1(1)                              <---------ICU4             <-------
------->ID1 <---------YAB1                  <---------AtLEC2     --------->YAB1          <---------ANAC46
----DOF2    <---------AHL20(2)           <----------DOF2        <---------ATHB12       --------->ZAT14
-GT1     <----------DOF2         --------->ZAT6               --------->YAB1           <---------ZAT14
-------RAV1(1) <---------YAB1    --------->YAB1     --------->GLK1(1)        <---------AHL20(2) ----
 
gttgtttcgcttctttttattgttgcttgagttctatcactatgctttcatggagaattcttggataatcatgctggtgttttatttcggtgcagtgcga  17704000
                                                               <-------TEIL
                                                            ----------->GT1
                                                           <---------------AtSPL8
   ------>NtERF2                                        --------->ARR14(2)
------->HVH21                                           <---------ARR14(2)
----At4g35610                                           <---------AGP1              ----------->GT1
--->At4g35610                ====================================HOX2a_HOX2a   <---------AHL20(2)
->ZAT14                      <---------HSFB2a(2)      --------->ETT(2)   <----------DOF2
--ZAT14 --------->ALFIN1     ------>ZmHOX2a(1)        <---------ETT(2)<---------AHL20(2)
------->TGA1 <------ZmHOX2a(1)             ---------->DOF2------>ZmHOX2a(2) ----------->GT1        -
 
tgacgacgactgtggaggacaatcgcgaggtcctcgaggctgttttgaaagaagcggtcgatctggtacatattttctttagtaaatttgtgaaactttg  17704100
                                            --------------->AGL15                             <-----
                                  <------ZmHOX2a(1)                                           ------
                                --------->LBD16                                 --------->ANAC58   -
                               --------->HSFB2a(2)                              --------->ANAC58   -
                               <---------LBD16                           <---------REM1(1)--------->ZAT6
                               <---------HSFB2a(2)              <---------GLK1(2)     --------->ARR11(3)
                       --------->AHL20(2)   <---------------AGL15--------->GLK1(2)    <---------ARR11(3)
                       <---------AHL20(2)  ----------------->AGL3--------->ARR14(2)  <------MYB46(1)
---------->GT1     <---------ANAC46        ----------------->AGL1<---------ARR14(2)  <------MYB83  -
 
taagggaaaatggtctgagattgtgtttaaatttccaggaaaatgtgccaattgaagaagtatttgagaatctgagatgtagcaaggaaggtctcactac  17704200
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AGI:  At3g47950.1   
Description:  AHA4 (Arabidopsis H(+)-ATPase 4); ATPase. Identical to ATPase 4, plasma membrane-type (AHA4) [Arabidopsis Thaliana] (GB:Q9SU58;GB:Q8GXR3); similar to AHA8 (ARABIDOPSIS H(+)-ATPASE 8), ATPase [Arabidopsis thaliana] (TAIR:AT3G42640.1); similar to AHA11 (ARABIDOPSIS H(+)-ATPASE 11), ATPase [Arabidopsis thaliana] (TAIR:AT5G62670.1); similar to AHA2 (Arabidopsis H(+)-ATPase 2), ATPase [Arabidopsis thaliana] (TAIR:AT4G30190.1); similar to plasma membrane H+-ATPase [Juglans regia] (GB:AAQ55291.1); similar to plasma membrane H+ ATPase [Prunus persica] (GB:CAB69824.1); similar to Plasma membrane ATPase 1 (Proton pump 1) (GB:Q08435); contains InterPro
Range:  from: 17703687    to: 17708984    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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