Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------HSFB2a(1)                          --------->HSFB2a(1)                         <-----------ARR10                      --------->ANAC58                      --------->ANAC46                     --------->LBD16                    <---------ALFIN1                                 <-----------GT1                 --------->PCF2                                   <---------ICU4                --------->ZAT18      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <                <---------ZAT18    <-------TEIL             --------->TOE2(3)                       -              ------->PIF5--------->HSFC1(2)          <---------ARR11(3)                            -       ---------->DOF2--------->ANAC58              <---------MYB52(1)             <----------DOF2  < ------DOF2   <-------PIF5<---------HSFC1(2)    --------------------->WRI1     <---------------------   ttcatgcccaaatgcaagtgccccacgaaacttcgcatacatatggtttacctcgttatcttcgttaaaaattactatctctgttcttttttgtttgatt  17617000                                                                                                  ---                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                         --------->AHL20(2)        --------->ARR11(3)              <---------AHL20(2)                               --------->YAB1        <---------ARR11(3)              --------->AHL20(2)              <---------AHL20(2)    <------        --------->AHL20(1)              --------->AHL20(1)        --------->TOE2(3)   --------->YAB1        <---------AHL20(1)         --------->AHL20(2)            ----------->GT1     <---------YAB1     --------->AHL20(2)            <---------AHL20(2)           <---------YAB1      <---------AHL20(2) ---------HSFC1(1)             --------->AHL20(2)      --------->ATHB12 --------->AHL20(1)    ------- -------->HSFC1(1)             <---------AHL20(2)      <---------AHL20(2)   ----------->GT1   <------ -------->HSFB2a(2)          <---------YAB1           --------->AHL20(2)--------->AHL20(2)  --------- ---------HSFB2a(2)      <---------GLK1(2)         --------->ICU4<---------ZAT6     --------->AHL20(2) ---ANAC81           ---------->DOF2<---------AHL20(2)--------->ICU4    <---------AHL20(1)--------->AHL20(2)   ttctagaaaaaatatttgtttcaaaaagattatttttttaaattttttatgcaatatttattagttattgttaataaattgtaaattttaataaaaataa  17617100     --------->ATHB12    <---------YAB1   --------->ARR11(3)   <---------ARR11(3) ------>AHL20(2) ---ATHB1                                                                     --------->AHL20(2) --->ATHB51                                                               <---------AHL20(2) -->HAHB4                                                                --------->AHL20(1) --->ATHB12                                                            --------->AHL20(1) ----ICU4                                                              <---------AHL20(1) ---AHL20(2)                                                     --------->TOE2(3)             ------ -->AHL20(2)                                                     --------->TOE1(3)       <---------DAG2 ---YAB1                                              --------->AHL20(2) <---------AHL20(1)   ------- -->ICU4                     ----------->GT1--------->AHL20(2)   <----------DOF2         <----------DOF2 ---ATHB51                 <------------CBF --------->AHL20(1)<-----------GT1 <---------AHL20(2)  --- >YAB1            <---------YAB1           --------->YAB1    --------->AHL20(2)       <-----------GT1   ttgaatatcattggtttaaaattatagaaaattgtaaaatacaaaaaataatacattttaaaattaactttaatatatattttaatataaacttttccta  17617200                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                             <-------PIF5                                                                                             <-------MYC3                                                                                             ------->PIF5                                                                                             ------->MYC2                                                                                             ------->MYC3                                                                                             <-------MYC2                                                                 <---------WOX13(1)         =========                                                                <------------CBF            <--------                                                               --------->ATHB51             ---------                                                               --------->ATHB12             ---------                                                               <--------ATHB1               <--------                                                               <---------ICU4               <--------                                                               -------->HAHB4               <--------                                                              <---------YAB1                <--------                                                              --------->ICU4            <-----------HVH21                                                       ==============================================                                                  ------>ZmHOX2a(1)                   ------->MYC3                                              ------->TEIL    <---------ATHB51        <-------MYC3 --                                           --------->AtLEC2 --------->YAB1           <---------ANAC55(2)         --------->YAB1                 <-------TEIL   ----------->RAV1(1)           <---------ANAC58 >ZmHOX2a(1)--------->AHL20(2)  ----------->GT1  --------->TOE2(3)                   <---------ANAC58 -->TOE2(3)--------->AHL20(2)   --------->ANAC55(2)    ------->GAMYB            --------->YAB1------- ------>AHL20(2)                <---------ANAC55(2)   --------->MYB46(3)  ----------->GT1----------->HVH21   aaaaataacaaaaataaaaaacatagggagtattaagtaacatccatgcatcctcaaccacataataattggcaagtcgtaataaaaacgtgtcacgtgg  17617300 ------ARR11(3) ------ARR14(2) ----->ARR14(2) ------AGP1 ----->ARR11(3) -----CCA1(2) =====================================bZIP_DOF -bZIP60(2) >O2 >TGA1a -O2 -ANAC46 -ANAC55(2)                                                                            ----------->GT1 -TGA1a             --------->AHL20(2)                                               ---------->DOF2 =MYC_MYB          --------->AHL20(2)                                             --------->YAB1 ---->ZmHOX2a(2) --------->TOE2(3)                                         <----------DOF2 -->ALFIN1     <-------TEIL---------->DOF2     ----------->GT1         <---------GLK1(2)        -----   atcttgttgtcacaaaatacattaaaaaacaaaggaaatataaaacagaaggaaaataccaaaatcaagaccagaagctttttatcagaaagaaaaaaaa  17617400                           <---------MYB52(1)                                      --------->WRKY38(1)                         --------->ANAC46                                     <---------TOE1(2)                         --------->ANAC58                                  --------->MYB52(1)                         --------->ANAC58                                  ------>MYB46(1)                        <---------LBD16                                    -------->P                 --------->YAB1                                            ------>MYB83                 <---------ICU4                                          <---------MYB59                <---------ATHB12    ----------->HVH21                    <---------MYB111(1)            <---------ANAC58      <---------ANAC58                       --------->TOE1(2)     ------------>CBF   <------NtERF2                                 <-----------GT1              <-   --------->REM1(1)<-----------HVH21                      ----------->GT1--------->MYB55(1)      --- ----->DOF2 <---------ANAC58      <---------ANAC58  <----------DOF2--------->TOE2(3)<---------WRKY18(1)   aagcttcaacaatggcgaatcatgtccccgctagtttcttgacgagggctaatgctttgttcagaaaaaacttaacctaccaggtttgaccaaagaatac  17617500                                                                    --------->AHL20(2)                                                                <---------YAB1   <-------MYC3                                             --------->KAN4(2)   ------->MYC2                                            --------->KAN4(1)   <-------MYC2                  <---------YAB1            <---------KAN4(1)   ------->MYC3                 <---------TOE2(3)          --------->HSFB2a(1)         --------->ANAC58 ------->TEIL           <---------ARR11(3)                 <---------HSFB2a(1)         --------->ANAC46 ------TEIL             --------->GLK1(2)                 <---------KAN4(2)          --------->MYB52(1) ------>AtLEC2          --------->ARR11(3)  <---------------AGL15   <---------AHL20(2) --------->ANAC58   atgcatgtgttatctattgtatacaaaatctatttatgttaagttgatatatatagctagaatattctaatttatcaattggtttagaaacggaacatat  17617600                                                                                         --------->At4g35610                         <----------DOF2                                                 <---------ZAT2             ---------->CDC5                         <---------ARR14(2)                  <---------At4g35610          <---------At4g35610                   --------->ALFIN1              --------->AHL20(2)        <---------DEAR3(1)                <----------DOF2                   ----------->GT1    --------->ICU4<---------YAB1      <---------ZAT18<XXXXXXXXXXXXXXXXXXXXMIR166A-G<-----------GT1   ggagtaatgttcggctcatcgtgattcctttctacctctgtgtgcttctagtggggattcaagtcttgtttgatacacaagttaataactctgctgataa  17617700                ------->TEIL              <-------TEIL         <---------------------WRI1       <---------MYB46(3)                                                                          <-     <-------GAMYB                                                                                 <-    <---------MYB46(3)                                   <---------AtMYB61                 <---------   --------->ALFIN1                             ---------->DOF2       <-------TEIL  --------->ANAC58   <---------AtMYB61                        ---------->DOF2         --------->YAB1  --------->ANAC58   tcgatgtggttgtcgatgcatccacaaaaatggagatggaaaatgcgaaagaaagagttgtggtttacaatattcatctctaactcaagcctccttttgt  17617800                                                                                  <---------ZAT18                                                                                <-------MYC2     ----                                                                                ------->MYC3    <----                                                                                <-------MYC3    =====                                                                                ------->MYC2   <-----                                                                                ------->PIF5   <-----                                                                                <-------PIF5   <-----                                                                            <---------ZAT2     ------                                                                          <---------CCA1(2)    ------                                                                         --------->LBD16       <-----                                                                         <---------MYB52(1)    ------                                                                        --------->ANAC46       <-----             <---------ALFIN1                  ==========================HOX2a_HOX2a           ------            --------->MYB46(3)           --------->LBD16            ------>ZmHOX2a(1)         <------          --------->ANAC46              <---------ANAC58            =================================   --------->HSFB2a(2)     <---------MYB52(1)  ------>ZmHOX2a(1)    ================================= --------ANAC58   <---------MYB52(1)    <---------ANAC58          ------>ZmHOX2a(2)           <------ZmHOX2a(1) --------ANAC58  <-------GAMYB       --------->ARR14(2)           ===================================HOX2a_HOX2a -DOF2   ------->GAMYB    <-------GAMYB<---------LBD16          --------->ARR11(3)--------->ZAT14====   gccttccctaaccctccaccgttgctcccgttgctacaaattccgcgtcctgaaactcgtttagttgatcctgcccgtagctcgtgcagacgaacaggat  17617900  Previous    Next  AGI:  At3g47750.1    Description:  ATATH3 (ABC2 homolog 3); ATPase, coupled to transmembrane movement of substances. Identical to Putative ABC2 homolog 3 (ATH3) [Arabidopsis Thaliana] (GB:Q9STT8); similar to ATATH5 (ABC2 homolog 5), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47770.1); similar to ATATH4 (ABC2 homolog 4), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47760.1); similar to ATATH6 (ABC2 homolog 6), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT3G47780.1); similar to hypothetical protein OsI_028133 [Oryza sativa (indica cultivar-group)] ( Range:  from: 17617412    to: 17621874    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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