Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <------MYB46(1)         <---------ANAC46         <---------ANAC58         <------MYB83         <---------ANAC58        <---------MYB46(3)        --------->MYB55(2)                                         ---------->DOF2        <---------DEAR3(1)                                    <---------AHL20(2)       <---------MYB55(1)                                    --------->AHL20(2)        <---------YAB1       --------->ALFIN1                                      <---------AHL20(1)  --------->ARR11(3)      <---------MYB52(1)                                     --------->AHL20(1)  <---------ARR11(3)   <---------At5g28300              ----------->GT1   ---------->DOF2   --------->CCA1(2)  <-----------GT1             <---------WOX13(1)  <---------HSFB2a(2)  --------->ARR11(3) -------DOF2                --------->ATHB12      --------->HSFB2a(2)  <---------ARR11(3) <---------YAB1 ------DAG2                <---------YAB1     --------->REM1(1)  <---------YAB1 --------->GLK1(1)   ttttttacggtgggtgttttttttttcatttgattgatgagtaaatctacatcgagaaaagaatataatgaaagatataccgaaatcttttgattatgga  17569400                                                                                       --------->AHL20(1)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                               ----------->GT1                                                                              --------->TOE1(3)                                                                             <---------ANAC46                                                                             ----------->GT1                                               >>>>>>>>>>WRKY6         <---------ICU4 --------->AHL20(2)                                               >>>>>>>>>>WRKY11       --------->AHL20(2)                  <----------DOF2             --------->WRKY38(1)     <---------AHL20(2)                 --------->TOE2(3)        --------->DAG2              --------->ICU4--------->YAB1              <-----------GT1            ---------->DOF2<---------ANAC58    <---------TOE2(3)   <----   <---------AHL20(2)          <---------At5g28300      <---------ANAC58   --------->MYB52(1)   <----  --------->AHL20(2)          <-----------GT1 --------->WRKY45        <---------ATHB51<---------AHL20(2)   cagatttattttgtttaaacctttttttttttttactgttttaaaaagttgactaaatgcttatctgagaaaataattaacgtgaaaaataatttgatat  17569500                                                                                                    <                                                  --------->TOE2(3)                                --                                                <---------TOE1(3)                            <-------GAMYB                                               --------->MYB52(1)                           <--------                                      --------->At4g35610                                   <--------                                      <---------At4g35610                                   <--------        <---------TOE2(3)       --------->ATHB12<---------TOE2(3)            --------->TOE2(3)     <- -----AHL20(2)       ------->GAMYB<---------WOX13(1)         <<<<<<<<<<<<<<<<<LFY      <---------ICU4 -----YAB1     --------->YAB1  <---------YAB1  <---------DOF5.7(2)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   aattcggattaagttaactataacagactgattttgattgagcagaaattaacgttgaaatattcacattggctaattacatcaattcatttttgcgttg  17569600                                       <---------YAB1                                     --------->ANAC58   ----------->HVH21                  >>>>>>>>>>>>>>>>>LFY                                --------->ANAC58 ---------AHL20(2)                <----------TaMYB80                                 ---------->DOF2 ------->AHL20(2)                --------->ARR11(3)                               --------->YAB1 -ANAC58                         <---------ARR11(3)                           --------->ICU4 -ANAC58     <----------DOF2    --------->YAB1                             <---------AHL20(2) -ANAC46 <----------DOF2    <---------AHL20(2)                           --------->ANAC55(2)       -- --------AHL20(2)          --------->AHL20(2)                    <---------YAB1  <---------YAB1<-----   attaaatgacactttcttttcttcaactattaaatgatattcccattgttgacatttctctaagtatatgattttaagtaattttcataaagaagcaatg  17569700                                                         <---------TOE2(3)                                     --------->ARR11(3)  <---------TOE1(3)                      <----                            --------->ANAC55(2)       <---------AHL20(2)        <---------YAB1 ------                            <---------ANAC55(2)    --------->AHL20(2)           <---------AHL20(2)                          --------->CCA1(2)        <---------AHL20(2)           --------->AHL20(2)<--       <---------YAB1    --------->ARR11(1)    <---------AHL20(2)    <---------At4g35610       <-----   --------->ARR14(2)    --------->ARR11(3)    --------->AHL20(2) ---------->DOF2          --------->YAB1 ------->ZAT6            <---------ARR11(3) <----------DOF2    <---------ANAC55(2)        <---------ATHB12 ----ATHB12          ---------->DOF2 <---------ARR11(3)<---------AHL20(2)      --------->AHL20(2)----   aacagtattttcatttgaaaaaaaaaagatatgtaatgagatttttcttttaattttttaatgttatgtaaagctcacccatataattctcactcatgat  17569800      <----------DOF2  ---------->ID1 -----YAB1<---------TOE1(3)                                                                 <-------- --->ARR11(3)                                             <---------ATHB12                 <--------- --------DOF2                       <----------DOF2     --------->WOX13(1)             <---------AHL20(2) ----ARR11(3)<----------DOF2      *TSS            <----------DOF2                <---------DAG2 -->ZmHOX2a(2)          <------------CBF      ------>ZmHOX2a(1)                  <----------DOF2   ctttgtttctttaagcttttcttctccattgtctctctctttcttatcctctctttctcaatcaattccttcagacttatacactttattttttttcccc  17569900                                                     --------->AHL20(2)                                                    --------->AHL20(1)                                                    <---------AHL20(1)                                                   --------->AHL20(2)                                               --------->AHL20(2)                       --------->AHL20(2)  --------->AHL20(2)         --------->At4g35610       -----                      --------->AHL20(2)   <---------AHL20(2)         <---------At4g35610   --------- ---GT1           --------->AHL20(2) --------->TOE1(3)     <---------AHL20(2)             ---------->DOF2 --GT1            <---------AHL20(2) --------->TOE2(3)    --------->AHL20(2)<---------ALFIN1---------   tcttgtcgaaaacatcacatataaataaaaaaccaaaaaccctaatttataaaatatatataaaatagttatagctccccacttatatatgcaaaagcca  17570000                                                                                           ------>NtERF2                                                                                           --------->ABI4(1)                                                                                           <---------ZAT18                                                                                 --------->AtMYB61                                                                                --------->MYB46(3)                                                                              <---------ALFIN1                                                                           --------->AtMYB61                                                                          --------->At4g35610     <--                                                                          <---------At4g35610  <-----                                                                       <---------MYB52(1) --------->DREB2C(2)                                                                      <-----------TGA1    ------->GAMYB                    <---------ICU4                     <------ZmHOX2a(1)<---------ALFIN1  <---------ALFIN1                   <---------YAB1                   <------ZmHOX2a(1) <-----------HVH21   --------->DEAR3(1)      --------->ARR11(3)                          --------->ALFIN1   --------->DEAR3(1)  --------->MYB46(3)      <---------ARR11(3)                         <------ZmHOX2a(1)   --------->DREB2C(2) --------->DEAR4(2)   --------->ANAC55(2)       --------->ALFIN1  --------->ALFIN1      --------->ANAC46   --------->ABI4(1)   <---------ANAC55(2)    <---------DEAR3(1)  <------ZmHOX2a(1)   <---------ALFIN1     --------->AtMYB61 ------>RAV1(1)    --------->ICU4        <---------DEAR3(1)       --------->DEAR3(1)   <---------ALFIN1 >ANAC58         --------->YAB1        <-----------HVH21          --------->AtMYB61    --------->DEAR3(1) >ANAC58--------->TOE2(3)<---------ORA47(1)<------NtERF2         --------->MYB46(3)   --------->MYB46(3)   acatcaagtatcttaaatgtcataatggacggtggagacagcgtcggaggaggaggaggagatgatcaccaccgtcacctccaccatcaccaccgcccta  17570100                                                     <---------HSFC1(2)                                        --------->MYB46(3)                                     --------->MYB46(3) ------>MYB83                                   ------>NtERF2     --------->HSFC1(2)                                  <---------ETT(2)   <---------HSFB2a(1)                                 --------->SPL7      --------->HSFB2a(1)                                ------>NtERF2     --------->MYB46(3)------>ZmHOX2a(1)    <----------DOF2      --------->ANAC58      --------->MYB46(3)  <---------ALFIN1    <---------DAG2       --------->ANAC58--------->YAB1 ------>MYB46(1)   ------>ZmHOX2a(1)         -   <---------DAG2        --------->ANAC46------->GAMYB--------->AtMYB61------>ZmHOX2a(1)            - --------DOF2  <---------LBD16  <---------ATERF1(1)------->GAMYB ------>ZmHOX2a(1)<-----------GT1  -- ----ALFIN1--------->MYB46(3)  --------->DEAR3(1) <---------MYB111(2) <---------ALFIN1            ---   ctttcccttttcaactactcggaaaacacgaccccgacgacaaccatcaacaacaaccttccccttcctcctcctcctctctattttctctccatcaaca  17570200                                                                                                    <                                                                                                    -                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                         ------->GAMYB                      <--------              --------->ANAC58                          --------->ANAC58                   <---------LBD16              --------->YAB1                            --------->ANAC46                <---------HSFB2a(1)        --------->TOE2(3)                               --------->ANAC58               --------->GLK1(2)     <---------ICU4                             --------->LBD16                        --------->ARR14(2)     --------->YAB1                             --------->At4g35610          --------->ANAC58  <----- ----->MYB83  --------->ANAC58      ---------->DOF2  <---------WRKY38(1)     --------->ANAC58  <----- ----->MYB46(1)           --------->YAB1       ------->GAMYB          <---------YAB1   <---------ARR14(2) --------->RAV1(1)  --------->TOE1(3)         --------->MYB46(3) ----------->GT1     <------ZmHOX2a(1) ------>AtMYB61     --------->TOE2(3)      --------->MYB46(3)---------->DOF2 --------->ANAC46<-------   ccaacaattatctcaatcgcaacctcaatcgcaatcgcaaaagtcacaaccgcagacaacgcaaaaagagttattacaaacgcaagaggaatctgcggtg  17570300  Previous    Next  AGI:  At3g47620.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT1G69690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62540.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333); contains InterPro domain AMP-dependent synthetase and ligase; (InterPro:IPR000873) Range:  from: 17569834    to: 17571752    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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