Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->CCA1(2)             --------->ARR11(3)        --------->LBD16       --------->HSFB2a(2)       <---------HSFB2a(2)                                <---------AHL20(2)       <---------LBD16                                  --------->GLK1(1)      <---------LBD16                                  <---------ARR14(2)     <-------TEIL                                      --------->ARR14(2)    --------->GLK1(2)                                --------->LBD16    --------->ARR14(1)                              <---------ANAC58    --------->CCA1(2)                               <---------ANAC58                         <-------   <---------GLK1(2)                                <---------ANAC46                        <--------   --------->ARR14(2)        --------->ATHB12       --------->ANAC55(2)                <---------ALFIN1   <---------ARR14(2)       <-------TEIL           <---------LBD16                 --------->ANAC46   --------->ARR11(1)      <--------P        --------->MYB52(1)                    --------->ANAC58 ----------->ARR10      <---------TOE2(3)  --------->MYB46(3)                      --------->ANAC58 >ICU4<---------ANAC46--------->ICU4      --------->At4g35610               --------->ARR14(2) ----->AGL3  <---------ARR11(3)           <---------At4g35610               <---------ARR14(2)     <-   agcgagattcggggagatatagtaatgaggttgatgggaatttcagccaacgttgcggatttacttatagcattggcagaaattcacccaaacccctttt  17492600                                                   <------MYB46(1)                                                   <------MYB83                                                  <---------AtMYB61                                                  --------->MYB111(2)                                                  --------->MYB46(2)                                                  --------->MYB111(1)                                                  <---------MYB46(3)                                                 <---------MYB55(1)    --------->ANAC58                             <--------P    --------->ANAC58                            <-------GAMYB    --------->ANAC46                            <---------MYB52(1)  --------->AtMYB61                            <---------DEAR3(2)  <---------ALFIN1                             <---------MYB46(3)                                ----  ------->GAMYB                               <---------DEAR3(1)                                <---- --------->MYB46(3)                   <---------ZAT2                      --------->At4g35610  ------ ---DOF2                              --------->ZAT2       <---------ARR14(2)     --------->AHL20(2) -DAG2     --------->ZAT14            <---------At4g35610  --------->ARR14(2)     <---------AHL20(2) ----------GT1                        --------->At4g35610 <------ZmHOX2a(1) ----------->GT1    <-----   gtaaccacaccattacactcggtataagcggtttagtttcagcttgggccggttggtataggaactggccatcgtgagatgtaataaaatcaaatgtttg  17492700     <---------AtLEC2   <---------YAB1             <-----------GT1 ------>ID1          ------->MYC3 ---GAMYB ------->TEIL        ------->TEIL                                  <<<<<<<<<<WRKY63 --->MYB52(2)        <-------MYC3                                   <---------ARR11(3)              < ----MYB46(3) ------->TEIL ----------->GT1  --------->CCA1(2) <-----------GT1                      --   ttgttttgaatgaacgtatcaaacgtgtaatgtaactcacttgaatatatgaaacatttctattttacattatctatagtcaaatcgaaatcaaacaaaa  17492800                                <---------PCF2                                <---------ANAC46                             --------->ALFIN1                           --------->TGA1a                           <---------TGA1a                           --------->O2                           <---------ANAC46                           <---------ANAC58                                 <-----------GT1          ===========================bZIP_DOF                            ----------->GT1          ---------->DOF2  <---------O2                                  --------->YAB1 ---------TOE2(3)          <---------ANAC58      --------->YAB1   --------->At5g28300              <- ------->MYB52(1)         <-------TEIL          <-------TEIL     ----------->GT1   <---------ALFIN1--   ctaagggtatacaaaagtataatccacatacgtgggggacatttatgaaattcataaaacttggtaactgtaaaatagtaacttcccactctctcaccct  17492900           <---------MYB52(1)                                  <---------ICU4          <-------GAMYB                                       --------->ICU4          --------->At5g28300                               --------->YAB1         <---------MYB46(3)                             <---------HSFB2a(2)         ----------->GT1 <---------AHL20(2)           ------>MYB83        <---------DEAR3(1)    --------->ATHB12   <-----------GT1<-----------TBP    ------------>CBF      ------------>AtMYB77   <-------TEIL---------->DOF2--------->HSFB2a(2)   <---------TOE2(3)     ----------->HVH21  --------->AHL20(2)      <---------MYB52(1)<---------AHL20(2) --------ZAT14          <---------AHL20(2)      --------->DOF5.7(2)          <-----------GT1 ------->ZAT14  <---------AHL20(2)  <---------AtLEC2  ------>MYB46(1)     --------->YAB1       ------   cttcactgggacggttatttttttttttaaattcatttgcatcaaaagtcgttaccttccagtaatatttatagatttataacgatgcaatactcactaa  17493000                                              --------->ATHB12                             --------->ARR11(3)                                                 <----                         ---------->DOF2      <---------ICU4                                    <----                  <---------AHL20(2)         <---------YAB1                                     <----                  --------->AHL20(2)         --------->ICU4      --------->ANAC58            ------->TEIL ---->DOF2*TSS    <---------ICU4           --------->YAB1        --------->ANAC58         <---------YAB1   agaaacagaaacagagataattttttcgaaagaaattgatgagaagaatgattccaacatcgttttcaagtaagtttcaaggagtactaagtatgaatgc  17493100                                                       <---------DEAR3(2)                                                       <------MYB46(1)                                                       <---------MYB46(3)                                                       <------MYB83                                                      <---------AtMYB61                                                     <---------MYB52(1)        <-----------GT1                                                   <---------MYB46(3)      --------->AHL20(2)         --------->ANAC55(2)                     <---------At4g35610     --------->ANAC55(2)         <---------ANAC55(2)                     ------>NtERF2           --------->ANAC58 -----ANAC46                                 --------->ANAC46            --------->ANAC58<---------ANAC58 -----ANAC58                       <<<<<<<<<TBF1--------->DEAR3(1)       --------->ANAC46<---------ANAC58 -----ANAC58------->TEIL--------->TOE2(3)   ------>ZmHOX2a(1)<-----------HVH21--------->ICU4   gttgagatgttatgtatcagagtttatctcaaccttcttcttcgtcctcgcagccgttggttctgtcatgtcttcaagtaattactctgtttcttgatga  17493200                                                                                                   --                                                                                              <------                                                                                         ---------->ID1                                                                                        <---------ANAC58                                                                                        <---------ANAC46                                                                                        <------MYB83<                                                                        <---------ANAC46<------MYB46(1)                                                                   <---------At4g35610  <---------ANAC58                                                                 <---------ANAC58      --------->MYB52(2)                 --------->YAB1                                  <---------ANAC46      <---------MYB46(3)              ================================================MADS_MADS <---------bZIP60(2)   -------              <---------------AGL15               <---------LBD16<---------ANAC58      <---------AtMYB61              --------------->AGL15           <---------------AGL15<------MYB83        --------->MYB46(2)      ------>ZmHOX2a(1)                     <-----------------AGL1<---------MYB46(3)   --------->MYB55(2)      <----------DOF2             --------->TOE2(2) --------->LBD16<------MYB46(1)    <---------MYB55(1)    ------>ZmHOX2a(2)  --------->ARR11(3)  <-----------GT1     <---------MYB46(3)    <---------MYB52(1)   gtttgatccttttttgcaataagaagaaattgttaacctgtgttttttcttatcagggaaattgatggctggtgatgtgtctggtccgtttggtgtttta  17493300                                                                                     <---------ANAC46                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC55(2)                                    --------->At4g35610                              <---------ANAC55(1)                                 <---------MYB52(1)                                  <---------YAB1                                --------->TOE2(3)                                    <---------ANAC58                            --------->YAB1                                        --------->ARR14(2)                      <---------ANAC46                                   --------->ARR14(2)      <-------GAMYB   <---------ANAC58                                   <---------ARR14(2)     <---------MYB46(3)    <---------YAB1                           <---------ANAC55(2)            <-  --------->LBD16     <---------ANAC58                              ----------->GT1  <---------ANAC58 ------->MYB52(1)    <------NtERF2  <---------At4g35610         <-----------HVH21 <---------ARR14(2) ---AHL20(2)       <---------DEAR3(1)  <-----------GT1         <---------MYB46(3) <---------MYB52(1) ---------LBD16 <---------ANAC58<-----------HVH21             <---------AtMYB61 <---------MYB46(3)<-- -->AHL20(2)    <---------ANAC58<-----------TGA1           <-----------RAV1(1)<---------At4g35610 <--   ataccggcgattgctaatgcgttggcgttatcatcgtcagtttacatctcttggaacgtctctggtggtcatgtgaatccagcggttacgtttgcgatgg  17493400                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                               <---------MYB52(1)           <--------                           <---------MYB52(1)            <---------ANAC58                  ------->GAMYB        --------->ETT(1) ------->GAMYB                   <---------ANAC58                  --------->ANAC46   <---------ANAC46     --------->MYB46(3)            <---------WOX13(1)           ---------->DOF2   <---------ANAC58    ------>MYB83              --------->At4g35610      <---------ANAC58<----------   <---------ANAC58    ------>MYB46(1)           <---------At4g35610      <---------ANAC58--------->MYB46(3) ------GAMYB    <---------ANAC58               <-----------RAV1(2)   <---------ANAC46    <---------At5g28300 ---------RAV1(1)      -------->P  --------->ATHB12<---------YAB1    <---------ANAC58   --------->MYB52(1) -------MYB46(3)<---------ANAC58  <---------AHL20(2)--------->ATHB12 <---------ANAC58   <-----------GT1   ctgttgctggtcggattagcgttccaaccgctatgttttattggacttctcagatgattgcctctgttatggcttgccttgttcttaaagtaaccgtcat  17493500  Previous    Next  AGI:  At3g47430.1    Description:  PEX11B. similar to PEX11A [Arabidopsis thaliana] (TAIR:AT1G47750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42705.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) Range:  from: 17491588    to: 17492777    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g47440.1    Description:  TIP5;1 (tonoplast intrinsic protein 5;1); water channel. Identical to Putative aquaporin TIP5-1 (TIP5-1) [Arabidopsis Thaliana] (GB:Q9STX9); similar to DELTA-TIP2/TIP2,2 (tonoplast intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT4G17340.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73028.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 17493010    to: 17494143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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