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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                      ----------------->AGL1
                          --------->bZIP60(2)
                          --------->O2--------------->AGL15
                          ===========================bZIP_DOF
                          <---------bZIP60(1)
                       ------->GAMYB  <---------LBD16                <---------ANAC46
                       =============MYC_MYB                          <---------ANAC58
                       --------->ANAC46--------->LBD16              <-------TEIL
                       ----------->HVH21                      <---------ANAC58
        <---------AHL20(1)--------->bZIP60(1)                 <---------ANAC55(1)
        --------->AHL20(1)<---------O2----------->RAV1(2)     --------->ANAC55(2)
        --------->ARR11(3)--------->TGA1a                     <---------ANAC55(2)            -------
        <---------ARR11(3)<---------TGA1a                     <---------ANAC46            <---------TOE2(3)
--------YAB1          <---------MYB55(2)                      <---------ANAC58            <---------YAB1
------ICU4            --------->MYB46(3)            --------->TOE2(3)<---------ANAC58 <----------DOF2
----->YAB1            --------->DEAR3(2)         <---------ALFIN1<---------MYB46(3)  --------->TOE2(3)
---->ICU4            <---------At4g35610  ---------->DOF2     <---------bZIP60(2)  ---------->ID1
-----ATHB12          --------->At4g35610----------->HVH21<---------ICU4           <-----------GT1 --
-->WOX13(1)      <-----------HVH21   <-----------------AGL1  <-----------------------TaNAC69(2)   <-
 
catgaaaccgatatattgaaggtcacccgacgtcaaatttcccctgaaagggacacctcaaaattacgtggttcgtgtaatcttttttcctttaagatag  17491200
                                --------->ARR14(2)                           --------->ANAC46
                      --------->ANAC58                                       --------->ANAC58
               --------->AHL20(2)   <------MYB83                             --------->ANAC58
------>ZmHOX2a(2)     --------->ANAC58                                     <-----------GT1
-->CCA1(2)----------->GT1       <---------ARR14(2)                <----------DOF2
------->ARR14(2)<---------AHL20(2)  <------MYB46(1)            <---------ARR11(3)
--------ARR14(2)--------->AHL20(2)  ----------->GT1            --------->ARR11(3)  --------->AHL20(2)
 
ggatcggattatgcagtataaaattaagcaaatcgtatttggtgatatatcggttctaatgcataacatcttttatattcacacaatgaaatagctattt  17491300
                      --------->ZAT2
                      <---------ZAT2                                                 <---------LBD16
                     --------->ANAC58                                            <---------GLK1(2)
                     --------->ANAC58                   ------->TEIL       --------->ZAT14
             ---------->DOF2                           --------->ARR14(2)  <---------ZAT14
       <---------ANAC58            <---------ATHB12    <---------GLK1(2)   <---------ZAT18--------->GLK1(1)
       <---------ANAC58   <---------ALFIN1         ---------->DOF2         --------->ZAT18<---------GLK1(1)
 
gttttcagtttcgagctaaagcccaagctccagcccaaatcaaacccatttgtacaaagaacctcactcatctatttgtgcacaaattctcggatttctc  17491400
                                                           <--------ATHB1
                                                           -------->HAHB4
                    <---------ICU4                         --------->ATHB12
                   --------->ICU4                          <---------ICU4
                  <---------AHL20(2)                       --------->ATHB51
                 --------->YAB1                           --------->AHL20(2)
            --------->AHL20(2)                            <---------AHL20(2)
         <---------ICU4                                   <---------ATHB51              ------->TEIL
         --------->YAB1                              <---------MYB59                 --------->ANAC55(2)
         <--------HAHB4--------->YAB1                --------->TOE2(3)         <----------DOF2 <----
        <---------ATHB12      <---------ARR11(3)   ------->TEIL              ---------->ID1  -------
      --------->WOX13(1)      --------->ARR11(3)--------->ANAC46            <-----------GT1 <-------
------->GAMYB<---------AHL20(2)             --------->CCA1(2)           <---------AHL20(2) <<<<<<<<<
 
caacgctctcaatcattttataaaaattagaattatcttcaatctcgatatacgaacctaaataattgaaaacattttttttctttttatgtatttttct  17491500
                                                                <---------AHL20(2)
                           --------->AHL20(1)                   --------->AHL20(2)
------DOF2                 <---------AHL20(2)                  --------->AHL20(2)
--->ID1                 --------->AHL20(2)                  ----------->GT1          --------->ZAT2
----GT1             ------->TEIL                         ---------->DOF2             <---------ZAT2
<GT-3b     <----------DOF2 <---------AHL20(1)    <---------ALFIN1      <----------DOF2 *TSS
 
tttttatcaaatttctttttatgtatataaaatatttgtgaaagtttcttccacacatataaaagattaaatttctttttttatcccaagcttgaatatc  17491600
                                        <---------ATHB12
                                      --------->WOX13(1)
                              --------->AtMYB61
                            ------>NtERF2--------->YAB1
                            ----------->RAV1(1)
                           --------->ANAC46                                                  -------
                           --------->RAP2.6(2)                                              <-------
                          --------->MYB46(3)                                                <-------
                   --------->ICU4---------->DOF2                       ---------->DOF2      <-------
                  --------->ANAC58 --------->ANAC58                    =============================
 --------->TOE1(2)--------->ANAC58 --------->ANAC58                    =============================
 
aaaacatgagacaacaagagcaagtattagccaccacaaagcaatcatcttaaaactcaaaccccaaaacaaacaaaagacaaaacccgattgtttcgag  17491700
       <---------TGA1a
       --------->O2
       <---------O2
       --------->TGA1a
   <-----------TGA1                                                       <---------DOF5.7(2)
   <-----------HVH21                                                    <---------MYB52(1)
  --------->TGA1a                                             --------->LBD16
  --------->ANAC58                                            --------->At4g35610
  --------->ANAC58                                            <---------At4g35610
  --------->ANAC46                                        ------>ZmHOX2a(1)
  --------->O2                                 <---------ARR11(3)       --------->DOF5.7(2)
-->HSFB2a(2)                                   --------->ARR14(2)    <------NtERF2
--ANAC58                                       --------->ARR11(3)   ------>NtERF2
--ANAC46                                       <-----------ARR10   <---------ALFIN1
--ANAC58                                       <---------ARR14(2)<---------ATERF1(1)
=================bZIP_DOF       --------->At4g35610  ------>ZmHOX2a(1) <-----------HVH21       <----
============bZIP_DOF          <---------ICU4  <---------CCA1(2)  ------>NtERF2                 <----
 
cacaaacgtcacttgtggtttacatcgtcttcatcatctccataacttcatatctcctctccttccgctgccaccgttagcgatgtctttggacactgtg  17491800
                                                                                   <---------ANAC58
                                                                                   <---------ANAC58
                                                                                   <---------ANAC46
                                                                                  <------NtERF2
                                                                                 ------>NtERF2
                                                                              --------->ZAT2
                                                                              <---------ZAT2
                                                                              <---------At4g35610
                                                                           <---------ANAC58       --
                                                                           <---------ANAC46       --
                                                                      --------->ZAT2              --
                                         <---------ANAC58             <---------ZAT2       ---------
                                         <---------ANAC58    <---------O2  <---------ANAC58---------
                                       --------->ANAC58      --------->ANAC55(2)--------->ATERF1(2)
                                       --------->ANAC58      <---------ANAC55(2)<---------ATERF1(2)
                            --------->ANAC55(2)              <---------ANAC58 --------->At4g35610 --
      <---------AtMYB61     --------->ANAC58                 <---------ANAC58--------->ALFIN1   <---
   <-----------RAV1(1)      <---------ANAC55(2)             <-----------------------TaNAC69(2)------
-----ZAT18                  --------->ANAC58      --------->ARR11(3) --------->ANAC58      ---------
-----ETT(2)               --------->CCA1(2)       <---------ARR11(3) --------->ANAC58   <---------REM1(1)
 
gacaaactggtggtgttcttggccaagagagacggaatagacaagcttgtgaagacattccaatacgtggccaagctcgcgtgctggcatgttgaagcca  17491900
           <------NtERF2
           --------->RAP2.3(1)
          --------->LBD16
          ------>NtERF2
         --------->RAP2.3(2)                        --------->RRTF1(2)
         --------->DEAR3(1)                         --------->RAP2.3(2)
         --------->RAP2.6(2)                        --------->RAP2.6(2)
        --------->ATERF1(1)                         --------->ANAC58
        --------->RAP2.3(1)             ------>NtERF2--------->LBD16
      --------->ARR14(2)               --------->DEAR3(1)          --------->PCF2
      <---------ARR14(2)              <------NtERF2 --------->ANAC58        <----------DOF2
------->ANAC46      <-------TEIL      --------->ATERF1(1)          <---------TCP15(1)
------->ANAC58   <------MYB46(1)     <---------ATERF1(1)         --------->At4g35610   --------->WOX13(1)
------->ANAC58--------->ARR14(2)    <---------DEAR3(1) ---------->DOF2   <---------ARR11(3)  <------
>ANAC46 --------->DEAR3(2)        <-----------HVH21--------->RAP2.3(1)  <---------ALFIN1     <------
>ANAC58 --------->ERF1<---------HSFB2a(2)         <---------At4g35610   <---------CCA1(2) <---------
--------->HVH21  <------MYB83    <------MYB83     --------->At4g35610 <---------ALFIN1 --------->YAB1
------ALFIN1  <---------ARR14(2) <------MYB46(1)<-----------RAV1(2)<---------TCP20  --------->YAB1
----->RAV1(1) <---------MYB52(1)<---------AtMYB61 --------->ZAT2 <---------At4g35610--------->TOE2(3)
>ANAC58<---------ATERF1(1)  --------->ALFIN1<-----------HVH21<-----------HVH21 --------->AHL20(2)
 
cacgacccgaagccgccgataggttcaagaagtgggaggtcgcctccggtctcagccgcaaagccttcaggtcccacatctttttaatattaatcacttt  17492000
                                                                              <---------CCA1(2)
                                                                          <---------AHL20(1)
                                                                          --------->AHL20(1)
                                                                          <---------ARR11(3)
                                                                          --------->ARR11(3)
                --------->TOE2(3)                                         <-----------ARR10
  ---------->DOF2       ----------->GT1                                  --------->RVE1(1)
----DOF2       ----------->GT1                                           --------->CCA1(1)   -------
---DAG2  <---------bZIP60(1)                                         <---------WOX13(1)      <------
--GT1    --------->bZIP60(1)                                       --------->ATHB12       --------->YAB1
 
atcgacaaagtggcatcatcgtaaatatagtttaatagatgaaatgaaatgaaatgttttagtcacttcttgattaatatcttatctcatctagcatatt  17492100
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AGI:  At3g47430.1   
Description:  PEX11B. similar to PEX11A [Arabidopsis thaliana] (TAIR:AT1G47750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42705.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733)
Range:  from: 17491588    to: 17492777    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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