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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
----------------->
AGL1
--------->
bZIP60(2)
--------->
O2
--------------->
AGL15
===========================
bZIP_DOF
<---------
bZIP60(1)
------->
GAMYB
<---------
LBD16
<---------
ANAC46
=============
MYC_MYB
<---------
ANAC58
--------->
ANAC46
--------->
LBD16
<-------
TEIL
----------->
HVH21
<---------
ANAC58
<---------
AHL20(1)
--------->
bZIP60(1)
<---------
ANAC55(1)
--------->
AHL20(1)
<---------
O2
----------->
RAV1(2)
--------->
ANAC55(2)
--------->
ARR11(3)
--------->
TGA1a
<---------
ANAC55(2)
-------
<---------
ARR11(3)
<---------
TGA1a
<---------
ANAC46
<---------
TOE2(3)
--------
YAB1
<---------
MYB55(2)
<---------
ANAC58
<---------
YAB1
------
ICU4
--------->
MYB46(3)
--------->
TOE2(3)
<---------
ANAC58
<----------
DOF2
----->
YAB1
--------->
DEAR3(2)
<---------
ALFIN1
<---------
MYB46(3)
--------->
TOE2(3)
---->
ICU4
<---------
At4g35610
---------->
DOF2
<---------
bZIP60(2)
---------->
ID1
-----
ATHB12
--------->
At4g35610
----------->
HVH21
<---------
ICU4
<-----------
GT1
--
-->
WOX13(1)
<-----------
HVH21
<-----------------
AGL1
<-----------------------
TaNAC69(2)
<-
catgaaaccgatatattgaaggtcacccgacgtcaaatttcccctgaaagggacacctcaaaattacgtggttcgtgtaatcttttttcctttaagatag
17491200
--------->
ARR14(2)
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
--------->
AHL20(2)
<------
MYB83
--------->
ANAC58
------>
ZmHOX2a(2)
--------->
ANAC58
<-----------
GT1
-->
CCA1(2)
----------->
GT1
<---------
ARR14(2)
<----------
DOF2
------->
ARR14(2)
<---------
AHL20(2)
<------
MYB46(1)
<---------
ARR11(3)
--------
ARR14(2)
--------->
AHL20(2)
----------->
GT1
--------->
ARR11(3)
--------->
AHL20(2)
ggatcggattatgcagtataaaattaagcaaatcgtatttggtgatatatcggttctaatgcataacatcttttatattcacacaatgaaatagctattt
17491300
--------->
ZAT2
<---------
ZAT2
<---------
LBD16
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC58
------->
TEIL
--------->
ZAT14
---------->
DOF2
--------->
ARR14(2)
<---------
ZAT14
<---------
ANAC58
<---------
ATHB12
<---------
GLK1(2)
<---------
ZAT18
--------->
GLK1(1)
<---------
ANAC58
<---------
ALFIN1
---------->
DOF2
--------->
ZAT18
<---------
GLK1(1)
gttttcagtttcgagctaaagcccaagctccagcccaaatcaaacccatttgtacaaagaacctcactcatctatttgtgcacaaattctcggatttctc
17491400
<--------
ATHB1
-------->
HAHB4
<---------
ICU4
--------->
ATHB12
--------->
ICU4
<---------
ICU4
<---------
AHL20(2)
--------->
ATHB51
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
<---------
ATHB51
------->
TEIL
--------->
YAB1
<---------
MYB59
--------->
ANAC55(2)
<--------
HAHB4
--------->
YAB1
--------->
TOE2(3)
<----------
DOF2
<----
<---------
ATHB12
<---------
ARR11(3)
------->
TEIL
---------->
ID1
-------
--------->
WOX13(1)
--------->
ARR11(3)
--------->
ANAC46
<-----------
GT1
<-------
------->
GAMYB
<---------
AHL20(2)
--------->
CCA1(2)
<---------
AHL20(2)
<<<<<<<<<
caacgctctcaatcattttataaaaattagaattatcttcaatctcgatatacgaacctaaataattgaaaacattttttttctttttatgtatttttct
17491500
<---------
AHL20(2)
--------->
AHL20(1)
--------->
AHL20(2)
------
DOF2
<---------
AHL20(2)
--------->
AHL20(2)
--->
ID1
--------->
AHL20(2)
----------->
GT1
--------->
ZAT2
----
GT1
------->
TEIL
---------->
DOF2
<---------
ZAT2
<
GT-3b
<----------
DOF2
<---------
AHL20(1)
<---------
ALFIN1
<----------
DOF2
*
TSS
tttttatcaaatttctttttatgtatataaaatatttgtgaaagtttcttccacacatataaaagattaaatttctttttttatccc
aagcttgaatatc
17491600
<---------
ATHB12
--------->
WOX13(1)
--------->
AtMYB61
------>
NtERF2
--------->
YAB1
----------->
RAV1(1)
--------->
ANAC46
-------
--------->
RAP2.6(2)
<-------
--------->
MYB46(3)
<-------
--------->
ICU4
---------->
DOF2
---------->
DOF2
<-------
--------->
ANAC58
--------->
ANAC58
=============================
--------->
TOE1(2)
--------->
ANAC58
--------->
ANAC58
=============================
aaaacatgagacaacaagagcaagtattagccaccacaaagcaatcatcttaaaactcaaaccccaaaacaaacaaaagacaaaacccgattgtttcgag
17491700
<---------
TGA1a
--------->
O2
<---------
O2
--------->
TGA1a
<-----------
TGA1
<---------
DOF5.7(2)
<-----------
HVH21
<---------
MYB52(1)
--------->
TGA1a
--------->
LBD16
--------->
ANAC58
--------->
At4g35610
--------->
ANAC58
<---------
At4g35610
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
O2
<---------
ARR11(3)
--------->
DOF5.7(2)
-->
HSFB2a(2)
--------->
ARR14(2)
<------
NtERF2
--
ANAC58
--------->
ARR11(3)
------>
NtERF2
--
ANAC46
<-----------
ARR10
<---------
ALFIN1
--
ANAC58
<---------
ARR14(2)
<---------
ATERF1(1)
=================
bZIP_DOF
--------->
At4g35610
------>
ZmHOX2a(1)
<-----------
HVH21
<----
============
bZIP_DOF
<---------
ICU4
<---------
CCA1(2)
------>
NtERF2
<----
cacaaacgtcacttgtggtttacatcgtcttcatcatctccataacttcatatctcctctccttccgctgccaccgttagcg
atgtctttggacactgtg
17491800
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<------
NtERF2
------>
NtERF2
--------->
ZAT2
<---------
ZAT2
<---------
At4g35610
<---------
ANAC58
--
<---------
ANAC46
--
--------->
ZAT2
--
<---------
ANAC58
<---------
ZAT2
---------
<---------
ANAC58
<---------
O2
<---------
ANAC58
---------
--------->
ANAC58
--------->
ANAC55(2)
--------->
ATERF1(2)
--------->
ANAC58
<---------
ANAC55(2)
<---------
ATERF1(2)
--------->
ANAC55(2)
<---------
ANAC58
--------->
At4g35610
--
<---------
AtMYB61
--------->
ANAC58
<---------
ANAC58
--------->
ALFIN1
<---
<-----------
RAV1(1)
<---------
ANAC55(2)
<-----------------------
TaNAC69(2)
------
-----
ZAT18
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
---------
-----
ETT(2)
--------->
CCA1(2)
<---------
ARR11(3)
--------->
ANAC58
<---------
REM1(1)
gacaaactggtggtgttcttggccaagagagacggaatagacaagcttgtgaagacattccaatacgtggccaagctcgcgtgctggcatgttgaagcca
17491900
<------
NtERF2
--------->
RAP2.3(1)
--------->
LBD16
------>
NtERF2
--------->
RAP2.3(2)
--------->
RRTF1(2)
--------->
DEAR3(1)
--------->
RAP2.3(2)
--------->
RAP2.6(2)
--------->
RAP2.6(2)
--------->
ATERF1(1)
--------->
ANAC58
--------->
RAP2.3(1)
------>
NtERF2
--------->
LBD16
--------->
ARR14(2)
--------->
DEAR3(1)
--------->
PCF2
<---------
ARR14(2)
<------
NtERF2
--------->
ANAC58
<----------
DOF2
------->
ANAC46
<-------
TEIL
--------->
ATERF1(1)
<---------
TCP15(1)
------->
ANAC58
<------
MYB46(1)
<---------
ATERF1(1)
--------->
At4g35610
--------->
WOX13(1)
------->
ANAC58
--------->
ARR14(2)
<---------
DEAR3(1)
---------->
DOF2
<---------
ARR11(3)
<------
>
ANAC46
--------->
DEAR3(2)
<-----------
HVH21
--------->
RAP2.3(1)
<---------
ALFIN1
<------
>
ANAC58
--------->
ERF1
<---------
HSFB2a(2)
<---------
At4g35610
<---------
CCA1(2)
<---------
--------->
HVH21
<------
MYB83
<------
MYB83
--------->
At4g35610
<---------
ALFIN1
--------->
YAB1
------
ALFIN1
<---------
ARR14(2)
<------
MYB46(1)
<-----------
RAV1(2)
<---------
TCP20
--------->
YAB1
----->
RAV1(1)
<---------
MYB52(1)
<---------
AtMYB61
--------->
ZAT2
<---------
At4g35610
--------->
TOE2(3)
>
ANAC58
<---------
ATERF1(1)
--------->
ALFIN1
<-----------
HVH21
<-----------
HVH21
--------->
AHL20(2)
cacgacccgaagccgccgataggttcaagaagtgggaggtcgcctccggtctcagccgcaaagccttcag
gtcccacatctttttaatattaatcacttt
17492000
<---------
CCA1(2)
<---------
AHL20(1)
--------->
AHL20(1)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
TOE2(3)
<-----------
ARR10
---------->
DOF2
----------->
GT1
--------->
RVE1(1)
----
DOF2
----------->
GT1
--------->
CCA1(1)
-------
---
DAG2
<---------
bZIP60(1)
<---------
WOX13(1)
<------
--
GT1
--------->
bZIP60(1)
--------->
ATHB12
--------->
YAB1
atcgacaaagtggcatcatcgtaaatatagtttaatagatgaaatgaaatgaaatgttttagtcacttcttgattaatatcttatctcatctagcatatt
17492100
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AGI:
At3g47430.1
Description:
PEX11B. similar to PEX11A [Arabidopsis thaliana] (TAIR:AT1G47750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42705.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733)
Range:
from: 17491588
to: 17492777
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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