Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->HSFB2a(1)                                                                                      <---------HSFB2a(1)                                                                                      ----------->GT1                                                                                      <------MYB46(1)        >>>>>>>>>MYB98                                                                <------MYB83 --------->YAB1                                                                 <-------MYC2 ---------YAB1                             <---------ANAC58                     <-------MYC3 -------ICU4                               <---------ANAC58                     ------->MYC3    <---- ------>YAB1                         <---------ANAC46                           ------->MYC2    <---- ----->ICU4                          <---------ANAC58                    ---------->DOF2    --------- --->YAB1 --------->TOE2(3)          <---------ANAC58                --------->At4g35610    --------- ---AHL20(2)          <---------MYB46(3) <---------YAB1              <---------At4g35610    <--------   tcatcatagtaacataaacaaggattgttgtaagagtttgcgtatgcttgaaactacaagagtagaaactgagctaaaagcacatggaaggttactttaa  17476200                                             ------>ZmHOX2a(1)                                          ---------->ID1                                       <----------DOF2                                 --------->AHL20(2)                                       <---------DAG2                              <----------DOF2 -----TOE2(3)                    --------->ANAC58               <-----------GT1    <---------DAG2 -----YAB1                  <----------DOF2<------------------------ANAC81      <-----------GT1 >TOE1(3)             <<<<<<<<<TBF1 <-----------GT1          <---------ICU4--------->YAB1    -------- >TOE2(3)          <<<<<<<<<TBF1 --------->ANAC58      <----------DOF2     --------->TOE2(3) <------- --DOF2       <----------DOF2    --------->ANAC46 <----------DOF2       <----------DOF2<---------AHL20(2)   cattggaaaaacacatctttcttcttcttcctttcaagtcacttttcctcttcttttctttcattttgacatttctttcttaatactttttaaatatgta  17476300                                                          <--------P                                                    --------->ATHB12                  --------->AHL20(2)                --------->YAB1                <----------DOF2                    <---------YAB1        --------->YAB1                           --------->YAB1        --------->AHL20(2)                      <---------YAB1                         --------->YAB1       <---------ATHB51                      <---------AHL20(2)                     <---------bZIP60(1)     --------->WOX13(1)                     --------->AHL20(2)     --------->YAB1   --------->bZIP60(1) ->ANAC55(2) --------->ARR11(3)         <---------YAB1 <---------TOE2(2)           <---------ARR11(3) --ANAC55(2) <---------ARR11(3)      <---------AHL20(2)<---------TOE1(2)         <---------YAB1   atggaatcaattatagacctttatataggtgtttgatattatatgattttataatcataggttgctaaataagaatgtaagtcatgatatcatatgaata  17476400                                                                                          --------->HSFB2a(2)                                                                                          --------->HSFC1(1)                                                                                          <---------HSFC1(1)                                                                                          <---------HSFB2a(2)                                                                                     --------->YAB1                                                                                     <--------ATHB1                    --------->ANAC46                                                 -------->HAHB4                  --------->ANAC46                                  --------->ANAC46 <---------ICU4                 ------->GAMYB                                      --------->ANAC58--------->ICU4        ---------->DOF2                         <---------ATHB12    --------->ANAC58<---------YAB1  <     --------->ANAC58                         --------->WOX13(1) <-------TEIL       <---------ATHB51<     --------->ANAC46     <---------ICU4   --------->YAB1    <-------TEIL         --------->YAB1-----     --------->ANAC58  --------->YAB1--------->ANAC46   ---------->DOF2         --------->AHL20(2)  -   caatcccaagcaaagacaacacacatcatcatgttctcccctcaataacaatcacttgcaaagtacatacacacaaactcaaaataataattctagaaaa  17476500             <---------AHL20(2)            <---------AHL20(2)            <---------AHL20(1)            --------->AHL20(2)     <-----------GT1 -------->ATHB1 --------->ATHB51                                                    ------------>CBF <--------HAHB4                                                 <---------HSFC1(2) <---------ICU4                                                 --------->HSFC1(2) --------->YAB1                                                 <---------HSFB2a(1) --------->AHL20(2)                  --------->AHL20(2)         --------->HSFB2a(1)               <-- ---------YAB1                     <----------DOF2          --------->ANAC58                      --- ---------ATHB51                   --------------->AGL15    --------->ANAC58                --------- ------->CBF--------->AHL20(1)     <---------------AGL15    --------->ANAC46                --------- -------->ICU4      --------->ANAC46 <---------AHL20(2)--------->ANAC46    *TSS             ---------   caattattaactaatttaatatacaaaactaaattccctttaattagttaagacatcacaccaagaaacttctcaattccccatacaaactcatacccaa  17476600                                                                              <-------TEIL                                                                            <---------SPL7                                                                           <---------ANAC46                                                                           --------->DEAR3(1)                                                                         ------>NtERF2              -                                                                         --------->LBD16            <                                                                        --------->DEAR3(1)         --       --------->AHL20(2)                                               ------------------>SPL14  <-- -------ARR11(3)                                                        --------->ANAC46    --------- ------>ARR11(3)                                      <<<<<<<<<TBF1   ------>ZmHOX2a(1)    <--------- >ANAC58                                         <---------CCA1(2)    <---------ATERF1(1) <---------ANAC58 >ANAC46                                      <------NtERF2     <---------MYB52(1)        <---------ANAC58 >ANAC58                 <----------DOF2   ---------->ID1   <---------At5g28300  <---------YAB1<-----   gaacttcaaaaaaatgcttagaggcatctttcacatttgcctcttggcctcatttcttcttctaccgttctcctccgccgtacatgatagtggcttcacc  17476700                                                                   --------->MYB46(3)                                                                   <---------MYB55(2)                                                                  ------>MYB83                                                     --------->RAP2.6(2) --------->ZAT2                                                    --------------->AtSPL3                                                  --------->ARR14(2)     <---------ZAT2                        <---------PCF5           ---------->DOF2  ------>MYB46(1)                        --------->TCP20        --------->ANAC46   -------->P                        <---------PCF2      ----------->RAV1(1)  <---------ALFIN1    --------->DEAR3(2)  --------->TCP15(1) --------->AtMYB61    <---------ALFIN1 <---------SPL7      --------->ALFIN1      <---------ALFIN1   --------->ANAC46                      < -------->ABI4(2)   --------->LBD16       --------->MYB46(3)------>MYB83------>NtERF2             --- ---------MYB46(3) <---------ANAC46       <---------MYB55(2)------>MYB46(1)                      ---- ------->ALFIN1    <---------ANAC58      ------>NtERF2--------->ZAT18  <---------ALFIN1          ---- -------MYB52(1)   <---------ANAC58     <---------ALFIN1  --------->AtMYB61                      ---- -->HVH21        ------>ZmHOX2a(1)      --------->ANAC46  <---------ALFIN1                      ----- -DOF2        ------>ZmHOX2a(1)        --------->MYB46(3) --------->DEAR3(1)                  <------ ----LBD16   <---------ALFIN1      <-----------GT1<---------ARR14(2)------->GAMYB           ---------   ggtggtaccgatgctcctcctccgtgggaccataatgtttccccaccaccagaaaccgcaccatccccaacccccacctcgagtccctctacaacctcac  17476800                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58                    --------->At4g35610                    <------NtERF2                    --------->ATERF1(1)                   <---------ERF1                   <---------RAP2.3(1)                   <---------RRTF1(1)                   <---------ATERF1(1)                  <---------RAP2.3(2)                  <---------RAP2.3(3)                  <---------DEAR3(1)                 <------NtERF2                 --------->ATERF1(1)                 <---------At4g35610                 --------->At4g35610                ------>NtERF2        ----------->HVH21       ------>ZmHOX2a(1)       --------->LBD16------>NtERF2       <---------HSFB2a(2)       =================================HOX2a_HOX2a            <---------bZIP60(2)                ---       --------->HSFB2a(2)                                  ----------->HVH21                     ---     ----------->RAV1(2)<---------ALFIN1              --------->LBD16                             --- ---------ALFIN1--------->ABI4(2)                    --------->LBD16                      <----------CDC5 --->NtERF2     <---------ATERF1(1)                  --------->HSFB2a(2)                --------->ANAC46 ----->DREB2C(2)--------->MYB55(2)                  <---------LBD16                     --------->ANAC58 ----->DEAR3(1) <---------MYB46(3)                  <---------ANAC46<---------DEAR3(1)<---------ALFIN1 ----->ANAC46  --------->ALFIN1                <-----------HVH21    --------->ALFIN1<---------ALFIN1 ---->MYB46(3) <---------DEAR3(1)     --------->MYB52(1)------>NtERF2<---------MYB46(3) --------->ANAC58 ---ALFIN1    <---------MYB52(1)     --------->MYB46(3)----------->HVH21  ----------->RAV1(1)-------- >AtMYB61<---------WRKY18(1)     <------ZmHOX2a(2) <---------LBD16  <---------AtMYB61<---------REM1(2)   cgccatctcctggaccggtggctgcgccatctccgatcaacaacggctctgtctccggggacatgacatggtggtgcaacaagactccacacgctgagac  17476900                                                       <---------ARR14(2)                                                     --------->HSFC1(2)                                                     --------->HSFB2a(1)                                               --------->AtMYB61                                              --------->MYB46(3)                    <---------WRKY12             <---------HSFB2a(2)           --------->MYB46(3)                       <---------WRKY38(1)             --------->HSFB2a(2)          ------>MYB83 --------->ARR14(2)          --------->WRKY18(1)       <---------------AGL15      --------->TOE2(3)  <---------HSFB2a(1)       <---------ANAC58  >>>>    <---------ICU4       --------->ANAC46 ------>MYB46(1)                <---------ANAC46        <---   --------->ICU4     --------->ZAT18     --------->SPL7           <---------ARR11(3) <---------TOE2(3) ------>ANAC58      <---------At4g35610 --------->TOE2(2)   <-----------HVH21  <---------ANAC58  >>>> ------>AtLEC2      --------->At4g35610 --------->TOE1(2)<---------LBD16 --------->ANAC55(2)     >>>> ------>ANAC58--------->LBD16     --------->TOE1(3)  <---------HSFC1(2)  <---------ANAC55(2)    ----- --->ARR10  <---------LBD16    ----------->RAV1(1)  <---------TOE2(3)   <---------LBD16         -----   atgcaattactacttccggaagagctcacaaaacaacattaacctacgaccaccaaggttccggtccgagttcttacggatgctggtcaaggtagcactt  17477000                                                          ---------->DOF2                                                          --------->MYB52(1)                                                        --------->MYB46(3)      --------->LBD16                                  --------->ANAC58     <---------ANAC58                                  --------->ANAC58     <---------ANAC58                                 ------->GAMYB  ------>MYB46(1)                                    <---------MYB111(1)  --------->ANAC58                                   --------->MYB46(3)  --------->ANAC58                                   <---------MYB55(2)  --------->ANAC46                                   <---------MYB111(2)  ------>MYB83                             --------->At4g35610 >>>>>>WRKY38                              --------->ZAT2------->GAMYB   <------MYB83  <---------CCA1(2) ------WRKY18(1)                           <---------ZAT2--------->AtMYB61<-----------HVH21 >>>>>>WRKY26               <---------MYB52(1)      ------>MYB46(1)      <------MYB46(1)        <---- >>>>>>WRKY43       --------->WRKY18(1)    <---------At4g35610 ---------->DOF2     <---------ANAC46 ------>HVH21      <-----------HVH21    XXXXXXXXXXXXXXXXXXXX>MIR171A  <---------MYB52(1)        ----- ---->WRKY38(1)--------->ANAC46<---------TOE2(3)    ------>MYB83<---------GLK1(1)  ----------->GT1   gaccaagccgtgatcacacacagtcaaaccgttaagtttggaccgagctgcaccaacaaccaaaggaaagccgcttggtcagactgcgtaaatctcttcc  17477100  Previous    Next  AGI:  At3g47400.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42679.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 17476575    to: 17479103    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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