Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                XXXXXXXXXXXXXXXXXXXX>MIR172C/D             --------->ARR11(3)                    --------->ATHB12             --------->AHL20(1)                   <---------YAB1                       ------>ZmHOX2a(1)             XXXXXXXXXXXXXXXXXXXX>MIR172A/B     <---------ANAC58                      --------->TOE1(3)             <---------AHL20(1)                 <---------ANAC58                      --------->TOE2(3)         --------->YAB1                      <---------CCA1(2)                 --------->WOX13(1)  --------->ANAC58                          ------->TEIL----------->GT1    <---------bZIP60(1)  --------->ANAC58                       <---------ANAC55(2)          <---------At4g35610          --  --------->ANAC46<-----------GT1        <---------ANAC46             --------->At4g35610   <-------- >ICU4  ----------->GT1  <----------ID1  <---------YAB1 <---------ANAC46   --------->bZIP60(1)     <-   gtccaagaaaatgaaaatattgacaatactacaaaatcaaattatgtatatcgtgattgtgtaaaatgagatagatgacatcaatcttccttaacatatt  17451800                                                  --------->ANAC55(2)                                                  <---------ANAC55(2)                                                  --------->ANAC46                                                  --------->ANAC58                                                  --------->ANAC58        --------->AHL20(1)                        ----------->GT1                               -----        <---------AHL20(1)                        --------->ANAC55(1)                          ------        --------->AHL20(2)                   <---------ICU4                                    <-----        <---------AHL20(2)        --------->TOE2(3)                            ---------->DOF2 <----- ------->HSFB2a(2)       --------->ARR11(3)  --------->YAB1              ----------->GT1       <----- -AHL20(1)               <---------ARR11(3) --------->ICU4   ======================================== --------HSFB2a(2)  <---------AHL20(2)      <---------ATHB12 --------------->AGL15 <----------ID1   tctgaaacaataaatttagtattttaagatgtctaacatcaaactaatcatcacgtaattttgcacaatttagaatggttttaaagtgacaaaacaaata  17451900                                                                                                -----  <-----------------AGL3                               --------->At4g35610                --------->At4g35610 ---->AHL20(2)                                      ---------->DOF2                       <---------- --->AHL20(2)                               <---------ANAC46      --------->ANAC58      --------->ATHB12 ----AHL20(2)                               <---------ANAC58      --------->ANAC58      --------->YAB1 ----ATHB51             --------->MYB52(1)  <---------ANAC58      --------->ANAC46    --------->GLK1(2) ----ATHB12   >>>>>>>>>MYB2    <------ZmHOX2a(1) --------->HSFB2a(2)           <---------ANAC58 <---- ===================MADS_MADS ----------->GT1    <---------HSFB2a(2)           <---------ANAC58<-----   attttcttattttgaaaaccaaaaaaaaacagaggaaaaatgtattgcctgcgagaaagctcaagaacacgaactctcttggcctgagaatcatcggaac  17452000           --------->ANAC58           --------->ANAC58      --------->ANAC58      --------->ANAC58                                                                       <-------      --------->ANAC55(1)                                                               --------->LBD16      --------->ANAC46                                                                 --------->HSFB2a(2)     <---------LBD16                                 <------ZmHOX2a(2)            --------->HSFC1(2) ------>ZmHOX2a(1)                                  --------->ARR11(3)            <---------HSFB2a(1) ---->HSFB2a(1)                                     <---------ARR11(3)            --------->HSFB2a(1) -----------WRI1       <-------MYC3             ---------->DOF2                   <---------HSFC1(2) -----HSFB2a(1)        ------->MYC3       ----------->GT1             ----------->GT1  --------->ANAC46 ----KAN4(2)        <---------ALFIN1    ---------->DOF2         --------->YAB1  <---------GLK1(2)   atcctaacacggcaagtattccacacatgttttttttttgaagaaagtgaaaaagatcacgaagaatgagaacagaaaaacagaattttccgaaacttta  17452100                                                                         ----------->GT1       <-----                                                                      ---------->DOF2          ------                                  --------->ANAC46              <------ZmHOX2a(1)              ------     --------->ARR11(3)           --------->ANAC58           <---------LBD16          --------->ANAC46     <---------ARR11(3)--------->DAG2                    --------->GLK1(1)            --------->ANAC58   ----------->ARR10  ---------->DOF2   ----------->GT1--------->At4g35610            --------->ANAC58 ---DOF2 ----------->GT1          --------->ANAC58     <---------At4g35610 ----------->GT1     <-----   ggggatagatattgtaaaaccccaaaaagagattacaagaaaatgtaataaacagacagatgtccaggaagagaaaggagaaaattgcacgtagaagtgt  17452200                                                                                 <---------ANAC58                                                                               <---------ANAC46                                                                            <-----------RAV1(1)                                                                            <---------bZIP60(2)                                                                            <---------REM1(1)                                                                            <---------bZIP60(1)                                                                            --------->bZIP60(1)                                                                         <---------MYB52(1)                                                                         ----------->HVH21                                                                        <-----------HVH21                                                                       <---------ANAC46                                                                      --------->ATERF1(1)                                                                    <---------DEAR3(1)                                                                    --------->DEAR3(1)                                                                   <---------ABI4(2)                                                                   --------->ATERF1(1)                                                                   --------->RAP2.3(1)                                                                  <---------DEAR4(2)                                                                  <---------RAP2.3(1)                                                  <-----------TBP <---------ATERF1(1) <------MYB46(1)         <---------ANAC58          ----------->HVH21<---------AHL20(2)<------NtERF2   <------MYB83         <---------ANAC58   *TSS   --------->MYB46(3)            --------->ANAC46<---------ANAC58   < ----ZAT18                  <<<<<<<<<MYB2       --------------->AGL15------>NtERF2  <---------MYB55(1) --->ZAT18             <---------ANAC58        <-----------------AGL3<---------ATERF1(1)            < --->ZAT14             <---------ANAC58        ----------------->AGL3<---------RAP2.3(1)        <---- ----ZAT14             <---------ANAC46  <------------CBF      --------->MYB52(1)<---------ANAC46   <   actatcgatattcgtgtttttgatgtcttggttttctacgaccgattgctctatttatagacactaaacggcgccgtgatgtcgcgtttggttctgaagg  17452300                                                                           ----------->GT1                                                                          <-------MYC3                                                                          <-------MYC4                                                                          <-------PIF5                                                                          ------->MYC3                                                                          ------->MYC2                                <-----------GT1                           <-------MYC2                           <---------ANAC58                               ------->MYC4                           <---------ANAC58                              <---------TGA1a                     <---------AHL20(2)                                  --------->TGA1a                     --------->AHL20(2)                                  --------->ANAC55(2)                 --------->AHL20(2)             --------->LBD16          <---------O2            <---         <----------ID1    <---------ANAC46   <---------LBD16  <---------ZAT2                    <---       ----------->GT1   <-----------GT1     --------->MYB52(1)--------->At4g35610              <----  <---------ANAC46 <---------YAB1            <---------At5g28300         --------->O2           ===== ---------ANAC58 <---------AHL20(2)          <-----------------------TaNAC69(2)                 ===== ---------ANAC58<---------AHL20(2)          <-----------GT1    --------->ZAT2                   ----- --ZmHOX2a(1)   --------->AHL20(2)  --------->LBD16            <---------At4g35610 <-----------GT1  - ---------ANAC46<---------AHL20(1)<---------LBD16        ----------->HVH21------->PIF5      ---------   agtcgtgtatgggaacaaattatttttttacttgtaaccggataagttaccggataactctgaccagctgtttccacgtgttaattaaccttcttacgac  17452400                                                                                              -------                                                                             --------->LBD16  <------                                                                           <-----------------AG<-----                                                                           <---------LBD16    -------  <---------MYB52(1)                                                      --------->MYB52(1)  <------ ------SPL7                                                            --------->HSFC1(2)    -------- --------HVH21                                                    <---------PCF2            <-------- -----TGA1a                                                      <------NtERF2             <---------LBD16 =================================bZIP_DOF                      <---------MYB46(3)     ---------->TaMYB80 =================================bZIP_DOF                  <---------DEAR3(1)     <---------TOE1(3) ---->TGA1a              <-----------GT1   <---------MYB52(1)  --------->ALFIN1    <---------TOE2(3) ---------->HVH21      <----------DOF2  <---------LBD16     <---------DREB2C(2)<----------DOF2------- >SPL7     <-----------GT1        <----------DOF2      <---------ICU4  <---------HSFC1(2)<-----------GT1   gtccgatgggttcttacttcttagtctttacattctcttttgtccggtttcttccaattttgacggtggggcaaacttccggtttagggtttatccggct  17452500                                                                                       <<<<<<<<<<<<<<                                                                                      --------->ANAC46                                                                             <-------MYC3                                                                             ------->MYC3                                                                             <-------MYC4                                                                            <---------ANAC55(2)                         --------->MYB52(1)                                 <---------TGA1a                        ----------->TGA1                  <---------WOX13(1)--------->ANAC55(2)                        ----------->HVH21               --------->ATHB12    <---------O2                      <---------At4g35610              <---------YAB1       --------->TGA1a                 <-------TEIL                    <---------WOX13(1)         --------->O2              <------MYB83                     -------->ATHB1            <---------REM1(2)   <---------At4g35610--------->At4g35610      <---------ICU4          <---------SPL7 --------->ANAC58 -->ZAT2      <------MYB46(1)                  --------->ATHB12       <---------ANAC46--------->ANAC58 ---At4g35610--------->MYB59                   --------->YAB1        --------------->AtSPL3 -----CDC5   --------------->AtSPL8            <--------ATHB1    =====================bZIP_DOF ---->RAV1(2)<---------------AtSPL8           <---------YAB1     ---------->DOF2    --------->YAB1 ---ZAT2     <---------------AtSPL3           <---------ATHB51<----------DOF2<-------MYC2 ->LBD16   <---------ARR14(2)                 --------->ICU4 <---------ANAC58------->MYC4 -RAP2.6(2)--------->ARR14(2) ----------->GT1 <---------ATHB12========================bZIP_DOF -->At4g35610--------------->AtSPL3        ------------>ATHB5<---------ANAC58------->MYC2      <-----   gagtcagcaagtggataggtacttatctgacggtgtaaaaactgtccaatgattgttctgattgctttagagccgtacacgtgttatcacgacaatggtg  17452600                                --------->ZAT18                                     <------MYB83                                --------->ZAT14             <---------ZAT14         <------MYB46(1)          <------ZmHOX2a(1)     <---------ZAT18             --------->ZAT14       <---------WOX13(1)<   >>>>>>>>>ARR2            --------->DAG2               <---------ANAC55(2)    --------->ATHB12 <--- <---------AHL20(2)     --------->YAB1               --------->YAB1     <------ZmHOX2a(1)     ------- <<<LFY <---------TOE1(2)  ---------->DOF2          <---------YAB1     ----------->GT1       <------- ----ANAC46         <---------AHL20(2)         --------->YAB1         --------->MYB59     <---------AHL20(2)   tatttgattgtaggattagcattttatcagaaagtgaacacatttcaaatgaaaatgataagtaaactgtgttaggaaaaattgattggtatttttttcc  17452700  Previous    Next  AGI:  At3g47340.1    Description:  ASN1 (DARK INDUCIBLE 6). Identical to Asparagine synthetase [glutamine-hydrolyzing] (ASN1) [Arabidopsis Thaliana] (GB:P49078); similar to ASN2 (ASPARAGINE SYNTHETASE 2), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G65010.2); similar to ASN3 (ASPARAGINE SYNTHETASE 3), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G10240.1); similar to ASN2 (ASPARAGINE SYNTHETASE 2), asparagine synthase (glutamine-hydrolyzing) [Arabidopsis thaliana] (TAIR:AT5G65010.1); similar to asparagine synthetase [Raphanus sativus] (GB:BAB17726.1); similar to Asparagine synthetase [glutamine-hydrolyzing] (Gluta Range:  from: 17448869    to: 17452228    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g47341.1    Description:  unknown protein Range:  from: 17452406    to: 17452552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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