Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <-----------ARR10                  <---------ARR14(2)                                                             <---                  --------->ARR14(2)                                                            <----                 ------>MYB46(1)                                                              <------                 ------>MYB83                        <---------At4g35610                      -------               --------->AtMYB61                     --------->ZAT2                          <-------               <---------MYB111(1)                   --------->At4g35610      --------->ARR14(2)<----             ------>NtERF2                         <------NtERF2          --------->SPL7     <-------            --------->RAP2.6(2)                  <---------DEAR3(1)      --------->MYB52(1)  --------       ------>ZmHOX2a(1)                        --------->ATERF1(1)     <---------SPL7      <-------- --------->HSFB2a(1)                            <------NtERF2         --------->LBD16      --------->LBD16 <---------HSFB2a(1)                           <-----------HVH21  --------->AtMYB61      <---------LBD16 --------->HSFC1(2)                           <---------ANAC58    <---------ALFIN1------>ZmHOX2a(1) <---------HSFC1(2)  <---------ALFIN1         <---------DEAR3(1) --------->MYB46(3)      <-----------RAV1(2) -ANAC58 --------->ANAC58                     <---------ANAC58  <---------At5g28300  ------>NtERF2  - -ANAC58 --------->ANAC46                 <-----------RAV1(2)  <-----------GT1<---------ARR14(2)----- -ANAC46 --------->ANAC58            --------->ANAC46<---------ZAT2  --------->DEAR3(1)<---------SPL7   agaggcttcctaagccaccaaatccaccctcgctcttcttcggcacaggcgtcggagctgagtttttaccaccgcgaacggttcctcggcctccggtggt  17348300      <----------DOF2 ------MYB46(3) -----DEAR3(1) ---MYB46(3) -->MYB55(2) --DEAR3(1) -----AtMYB61 --AtMYB61 ->ALFIN1             <----------DOF2                          --------->YAB1 -MYB52(1)     <---------ALFIN1                      ------>ZmHOX2a(2) ----->NtERF2 --------->MYB46(3)                   --------->ARR11(3)         ---------->DOF2       - ---->ALFIN1 <XXXXXXXXXXXXXXXXXXXXMIR825           <---------ARR11(3) --------->TOE1(2)   <---------GLK1(2)   ggtgccttctttctcatccaccttctttagaagtggattagtctcatagaactgatcttgttttgtcataaacccaagaacaaagtcgatgggattcttc  17348400                     ------>MYB83            <------NtERF2            ----------->RAV1(2)           ------>NtERF2           <------NtERF2<----------DOF2           <---------ATERF1(1)                           <------NtERF2          --------->RAP2.3(2)                            --------->LBD16          --------->RAP2.3(3)                           <---------DEAR3(1)          --------->ATERF1(2)                          <---------ANAC46          <---------ATERF1(2)                          <---------LBD16          --------->DEAR3(1)                        --------->ALFIN1         <---------RAP2.6(2)                   --------->MYB52(1)         --------->ATERF1(1)            --------->ARR14(2)         --------->RAP2.3(1)            <---------ARR14(2)<------NtERF2         --------->ORA47(2)          <---------ANAC58 <------NtERF2         --------->DEAR4(2)          <---------ANAC46------>NtERF2        <---------ATERF1(1)   <---------ANAC58 <---------ALFIN1   <----------DOF2   ------>MYB46(1) <---------ANAC58<---------MYB46(3)             >>>>>>>>>>>>>>>>>LFY ----->ZmHOX2a(1)------->TEIL <---------ANAC58----------->HVH21    <-----------------------TaNAC69(2)   tcctcctttgggccgcctgaacctccctttgtgcttgtggcgtaaaccctcacggtggccggagcaaatgacataagaagcgaagaaaccattgttgtta  17348500                                                                                        <-------GAMYB                                                                                        <---------ANAC46                                                                                       <---------MYB46(3)                                                                                       --------->MYB52(2)                                                                                       <------MYB46(1)                                                                                       <------MYB83                                <---------ANAC58                                       --------->MYB55(2)                                <---------ANAC46             <---------MYB46(3)       <---------AtMYB61                                <---------ANAC58  <---------ANAC58                    --------->MYB111(1)                            <---------MYB52(1)    <---------ANAC46                   <--------P                     <----------DOF2   ------->TEIL <-----------RAV1(1)       <-----------GT1                  <-----------GT1 <---------ANAC46<---------ANAC58         --------->YAB1    ------->TEIL   tctctctctcttctctggtttttctttatcggtagtgtgtgtatgtgtgtcttcgtgtggcatttgttacgaagggattataacgaggttggttgaatct  17348600                                                           <-----------HVH21                                                  <----------DOF2                       <---------ARR11(3)     <----------DOF2          <---------AHL20(2)                ------>ZmHOX2a(1)   <---------MYB52(1)--------->ANAC58<---------ANAC58  ---------->ID1                         <------ <---------MYB46(3)  --------->ANAC58<---------ANAC58 <-----------GT1    <----------DOF2 <-------TEIL   gagccgttggatttttttggcacaagctctccacaagtgtcttatcctctttcttttttcccttcacacatttttctttgaatcacttggatacattttt  17348700                     --------->ARR11(3)                     <---------ARR11(3)                    <---------CCA1(2)                  --------->CCA1(2)                  *TSS                    --------->KAN4(2)    ----------->GT1                 --------->ARR11(3)     ------->TEIL          --------->ANAC46    <---------AHL20(2)       ------------>CBF         <---------ARR11(3)                  ----------- ---AHL20(2)    <<<<<<<<<RAP2.2   <---------AHL20(2)  --------->ARR11(3)           ---------->DOF2   tttggtttaattgtttttagatatatcttggcacaatttatgtatattcttctcaagttcttaaacggaaatttgcacagagagtcaaagtcttcaattt  17348800                                                                                                    <                                                                                                    -                                                                                                 <---                                                                                                <----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                             <-------                                                                                             <-------GAMYB               <-----------HVH21                                                             <-------          <---------AHL20(2)                                                                 <-------          --------->AHL20(2)                                                                ---------         --------->AHL20(2)                                                                 <--------         --------->AHL20(1)                                                                 <------MYB46(1)         <---------AHL20(2)                --------->CCA1(2)                                <------MYB83     <---------YAB1                  --------->LBD16                      ------>ZmHOX2a(2) ---------     <---------AHL20(2)            <---------LBD16       <---------AHL20(2)       ----------->HVH21--   --------->YAB1                ------->TEIL  --------->ANAC58         --------->ARR11(3) <---------AtMYB61 ->CBF   <---------AHL20(1)   <---------YAB1   --------->ANAC58         <---------ARR11(3)<--------P<   cagatttataatttatttgtcaaatgaaatgtatgaatgcggaagagacacgacttgattttttttaagtgtgtgatcttgtccctgaccatgttggttg  17348900   --------->ZAT2   --------->At4g35610   <---------At4g35610                                         ------>NtERF2 ---------ZAT2                                             ========================bZIP_DOF -------->At4g35610                                        <---------TGA1a ------MYB52(1)                                            ========================bZIP_DOF ---GAMYB                                                  --------->TGA1a --->MYB55(2)                                              <---------O2 --->MYB111(2)                                             --------->O2 <----------DOF2 --->MYB111(1)                                            <------NtERF2 --------------->AGL15 ----MYB46(3)                                            ------>NtERF2  <---------------AGL15 --ANAC58                                               ----------->HVH21 --ANAC58                                               --------->DEAR3(1) --ANAC46                                      <---------MYB52(1)      <-----------------AGL2 >MYB55(2)                                  ============================================MADS_MADS -MYB46(3)                                  <-----------------AGL2     <-----------------AGL3 >MYB52(2)                                  <-----------------AGL3  <---------CCA1(2) ----------->HVH21 ------->MYB52(2)--------->GLK1(2)   --------->TOE2(3) --------->DEAR3(2)           ----------->GT1 ---------At4g35610               <-----------GT1      --------->ATERF1(1)  ---------->DOF2        --   ttagctgctgcaacttgagactctgatcaaaactaaaaaccttttttctgttattgggccgacgaggcccatttctttaaaaggaactgtgacaagatgg  17349000                      ------>ZmHOX2a(1)               <---------ZAT18       ----------->RAV1(1)               <---------ZAT14      --------->ANAC46               --------->ZAT14      --------->bZIP60(2)        ----------->GT1               --------->ZAT18    <---------ALFIN1  ------->TEIL  <-----------GT1      --------->ARR11(3)          ----------->RAV1(1)        ---------->DOF2         <-----------GT1  ---------->DOF2    --------->TOE1(2)--------->ZAT14<---------ZAT2       --------->AHL20(2)   <----- ------->CCA1(2)     --------->TOE2(2)<---------ZAT14--------->ZAT2     <---------ARR11(3)     ------   gatataaagctctagagtagactcctacgagtagcgccacaacactgatgaacgaagctcgaagaaagttacaagataaattccattaaacgattcaaat  17349100                                                                                                  <--                                                                                                  ---                                                                    ------->MYC3                  ---                                                              ------>ZmHOX2a(2)            ----------                                                            --------->ARR14(2)          --------->TOE2(2)        <---------YAB1                                <---------ZAT6<-------MYC3       <---------HSFB2a(1)     --------->ICU4                         <---------ANAC58<---------ARR14(2)        --------->GLK1(2) --------->ZAT18     --------->ANAC58       <---------ANAC58<---------ARR11(3)        --------->ARR14(2) <---------ZAT18     --------->ANAC58       <---------ANAC46--------->ARR11(3)        <---------ARR14(2) ----ARR14(2)      ---------->DOF2        <---------YAB1    <---------AGP1           <---------GLK1(2) --->ARR14(2) <-----------GT1          <---------YAB1 <-----------RAV1(1) <---------YAB1--------->TOE1(2)   atgcgcacttattatttcaccaaaagcaatgctcagtgtttattattcgtgtaatagtgttggatctacacatgttcttattcgatggaatctgcgaccg  17349200  Previous    Next  AGI:  At3g47070.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95428.1) Range:  from: 17348050    to: 17348718    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g47080.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT2G29670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21490.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 17349091    to: 17351381    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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