Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------AHL20(1)                                                                                <---------AHL20(2)                                                                                --------->AHL20(1)                                                                                --------->AHL20(2)                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                        --------->AHL20(2)                                   ----------->RAV1(1)              --------->AHL20(2)                                  <xxxxxxxxxxxxxxxxsmallRNA(s)      <---------AHL20(2)                            --------->At4g35610     <---------AHL20(2)  <---------AHL20(2)                            <---------At4g35610  <---------ARR14(2)<---------AHL20(2)                   --------->MYB52(1)--------->ANAC46              --------->AHL20(2)          --------->YAB1<---------ARR14(2)       --------->ARR14(2)<---------AHL20(1)       <xxxxxxxx       <----------DOF2  --------->ARR14(2)   <-------TEIL      <---------AHL20(2)     --------->ALFIN1   ctctattgtctttgatgatgcgaacgggtctgcatacccacataatgttcgtatttgatttagttttaatttttttaattaataaaatgtggggacattg  17343600            <---------------AGL15         ------>MYB46(1)         ------>MYB83         -------->P      ------->GAMYB    ------>MYB46(1)    -------->P    ------>MYB83 ---------->DOF2                ---------->DOF2       --------->ATHB12   <---------ALFIN1                   >>>>>>>>>CBP60g              <---------ANAC58  --------->AtMYB61                <---------ARR11(3)              <---------ANAC58      <----------DOF2  <---------ALFIN1               --------->ANAC58               <---------WOX13(1)      --------->ARR14(2)  --------->MYB46(3)             --------->ANAC58             --------->ATHB12<----------DOF2       < --------->MYB46(3)  ---------->DOF2  >>>>>>>>>SARD1 ---------->DOF2<---------WOX13(1)  <---------ARR14(2) xxxxxxxxxxxxxxxsmallRNA(le3) <-------TEIL ---------->DOF2   <---------YAB1 ---------->ID1      <----   tcccccaaccctaccaaaaaaaagaaagaagatgcaagaaatttggaaagaaaagaaaagagtatgattgagtgatttgtcttttaggccgattttgggc  17343700                                                                                     <---------ALFIN1                                                                                  ----------->HVH21                                               ------->MYC3                      <-----------HVH21                                               <-------MYC3                     --------->bZIP60(2)                                               <-------MYC2                   <---------ANAC58                                               ------->MYC2                   <---------ANAC46                                               ------->MYC4                   <---------ANAC58                                               <-------MYC4                --------->ANAC58                                               ------->PIF5                --------->ANAC58                                               <-------PIF5                --------->ANAC46                                              <---------O2                --------->SPL7                                              <---------TGA1a           <---------SPL7                                              --------->O2             <---------ANAC58                                              --------->TGA1a          <---------ANAC46                                              --------->ANAC46         --------->ANAC55(2)                                    <---------AHL20(2)                 <---------ANAC55(2)             <-----------GT1        --------->YAB1                     <---------ANAC58           <---------ATHB12         --------->AHL20(2)              <---------ARR14(2)             --     ------>NtERF2     --------->AHL20(2)     --------->ANAC55(2)   --------->ARR14(2)             <- ----------DOF2       <---------AHL20(2)    <------------OsbHLH66   ------------------>SPL14       -- -------------AGL1   --------->YAB1<---------ATHB12  ------>ZmHOX2a(1)--------------->AtSPL3       <-   ctctttcggcccaataaactctatattaattcttccaattatatgtccacgtgtcctcttgcaccattcggttccgtacgccgtgtcacacttgattact  17343800                               <---------MYB52(1)                           ------>ZmHOX2a(1)                         --------->SPL7                           --------->MYB52(1)                       <-----------HVH21                        --------->MYB46(3)                      ------->GAMYB                     <---------YAB1<-----------HVH21                      --------->DEAR3(1)               --------->ARR11(3)                     --------->MYB46(3)                <---------ARR11(3)       <---------At4g35610--------------------->WRI1   <---------AHL20(1) <----------DOF2     <------------AtMYB77             --------->RVE1(1)                         ----- ------->At4g35610  <---------At5g28300           <---------AHL20(2) ------->GAMYB              ----- --------At4g35610 --------->MYB52(1)             --------->AHL20(2)--------->MYB46(3)         ------ ------->ZAT2      <-----------GT1   --------->ETT(2) --------->CCA1(1)  ------------>CBF    -------- --------ZAT2 --------->ICU4  <-------GAMYB      --------->YAB1 ------>ZmHOX2a(2)        --------->GLK1(1)   cagctttgccgatgagataattaaccgtcctccgttgtatcgacggtcgaattttaatatctttgatccaacggtcacaattcgaagtcgtatttcccag  17343900              --------->YAB1                                                      <---------ICU4         <---------YAB1                                  --------->LBD16         --------->ICU4 --------->YAB1                                <----------DOF2                   <---------YAB1 ---->At4g35610                            <-----------GT1                     <---------ICU4 ---->ZAT2--------->ATHB12        <---------AHL20(2)     ------------>CBF      --------->YAB1 --->ANAC46<------------CBF       --------->AHL20(2)<---------GLK1(1)         --------->ICU4       -- ------------->WRI1         <------ZmHOX2a(2) --------->TOE2(3)       *TSS    <---------ATHB51     <-   caaacatcgtcttcattgaaaattagacagatcgatataaatgtgttacctttgatttccccaatttctagggtttcgaaataatgactactacattcga  17344000                     --------->ARR14(2)                  --------->ANAC46                  --------->ANAC58                                      --------->ARR11(3)                  --------->ANAC58                                      <---------GLK1(2)             --------->ARR14(2)                                         <---------ARR11(3)             --------->GLK1(2)                                       <---------HSFB2a(2)     --------             <---------ARR14(2)                                      --------->HSFB2a(2)<---------REM1(1)        ------->GAMYB<---------ARR14(2)                         <---------HSFC1(2)    <-------GAMYB       --------->MYB46(3)                                       <---------HSFB2a(1)  --------->MYB52(2)      --------->ANAC58                                          --------->HSFC1(2)   <---------MYB46(3)      --------->ANAC58--------->GLK1(1)                      ---------->DOF2         ------>ZmHOX2a(2)  --------->HSFB2a(2)<---------GLK1(2)                     --------->ANAC46         <------ZmHOX2a(2) ------->ARR14(2)--------->LBD16                          --------->HSFB2a(2)     ------->GAMYB --------ARR14(2)<---------LBD16  <---------REM1(1)       <---------HSFB2a(2)    --------->MYB46(3)   atttctgcaaccaagaatccacggatttgcaacttgttgtagtagtaatagtctattgtactcgaaagcttcgagatttttcaacgatcgttgtagggtt  17344100                                               <---------At4g35610                                               <---------ZAT14                                               --------->At4g35610                      ---------->ID1           --------->ZAT14                  --------->ANAC46                  <---------MYB52(1)        ------>ZmHOX2a(1)       --------->ZAT14          --------             --------->GLK1(2)       --------->ANAC58               <---------ZAT14  ----------->GT1             --------->ARR14(2)      --------->ANAC58              --------->ALFIN1 --------->DAG2       <---------ARR14(2)            --------->ANAC46          <---------At5g28300---------->DOF2       --------->GLK1(2)           --------->YAB1             <-----------GT1   --------->ANAC58       --------->ARR14(2)         <---------ATHB12         --------->ANAC58     <---------ANAC55(2) --->GT1     <---------ARR14(2) --------->WOX13(1)         --------->ANAC58     --------->ANAC58   tatcgccaaaatccgaatcggtttgtctccaattcaatcacgcttcctctgcagaagaaacaagttacagtgttgagaaatcacgaaaggtttaatcttt  17344200                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                             <-------                                                                                             --------                                                                                       <-----------HVH21             ---------->DOF2                                                 <------ZmHOX2a(1) <-----           --------->ANAC58                                               <------ZmHOX2a(1)  <------- ->ATHB12  --------->ANAC58 --------->MYB52(2)       --------->YAB1>>>>>>>ZML2   ---------->DOF2  <--   gggatgggttttcaagaaagaagagtagattagttgtgaattgtcaagaagatgatcagaacgagagttctagtgaggaggaagaaagcagtcagagtac  17344300                                                   ---------->DOF2                                                  <---------WRKY45                                                  <---------WRKY12                                                  <---------WRKY38(1)                                                 --------->WRKY18(1)                                               <---------MYB46(3) ----->NtERF2                                 <---------AtMYB61                  --------->YAB1 -------->LBD16                             <---------ANAC46                    <---------ATHB12 --------DEAR3(1)                          <---------AtMYB61               <------NtERF2 --ZAT18                                 --------->ALFIN1                  <---------At4g35610 ->ZAT14                              --------->DAG2                  --------->ALFIN1 ----ZAT14       ---------->DOF2    --------->CCA1(2)                --------->At4g35610 --ZAT14  <------NtERF2     ---------->DOF2--------->ALFIN1--------->ANAC58--------->ANAC58 -------LBD16  <------ZmHOX2a(1)   --------->ARR11(3)      --------->ANAC58--------->ANAC58   tccggcgaagtcggagaggaaaagagagaagaaagaagataaggtgtggtggtcaaagggcaagaaatggcagtggcagccaataatccaagcgcaaggg  17344400                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                     <---------ANAC58                                       ------>ZmHOX2a(2)                     <---------ANAC58                                     <---------ARR14(2)                     <---------ANAC46                                     --------->ARR14(2)          <---------REM1(1)                        ----------->HVH21  <---------LBD16          <---------MYB46(3)                    <---------ANAC46     ----------->RAV1(2)          <-----------RAV1(1)                   <---------ANAC58 <----------DOF2------>NtERF2     <--       <-----------RAV1(1)     <---------YAB1   <---------ANAC58--------->TOE2(3)           <--------   attggagttttgttgttgcaattgagtgttgttatgtttgtgatgcgattgcttcgacctggtatacctttacctggatcggagcctcgaattcagacga  17344500  Previous    Next  AGI:  At3g47060.1    Description:  FTSH7 (FtsH protease 7); ATP-dependent peptidase/ ATPase/ metallopeptidase. similar to FTSH9 (FtsH protease 9), ATP-dependent peptidase/ ATPase/ metallopeptidase [Arabidopsis thaliana] (TAIR:AT5G58870.1); similar to hypothetical protein OsJ_007487 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24004.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21504.1); similar to hypothetical protein OsI_008136 [Oryza sativa (indica cultivar-group)] (GB:EAY86903.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain Peptidas Range:  from: 17343970    to: 17347951    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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