Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ------>ZmHOX2a(1)                                                          <---------ALFIN1                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                       <---------ALFIN1                                                      <------NtERF2                                                      --------->ATERF1(1)                                                      --------->DEAR4(2)                                                     ------>NtERF2                                                    --------->ANAC58                                                    --------->ANAC58                                                   <-------MYC2                                                   ------->MYC2           <---------At4g35610                     <-------MYC3        ---------->DOF2   --------->ANAC58        --------->ANAC58     --------->TOE1(3)    --------->ANAC58        --------->ANAC58     --------->TOE2(3)    --------->ANAC46        --------->ANAC46              <-------GAMYB  ------>MYB46(1)       <---------ALFIN1      <---------ALFIN1                 --------->MYB52(2)  ------>MYB83       --------->ZAT14  --------->LBD16<---------ATERF1(1)       --------->MYB55(2)   <  -------->P         <---------ZAT18  <---------TOE1(2)--------->DEAR3(1)      <-----------RAV1(1) <- <---------ALFIN1    --------->ZAT18 --------->LBD16--------->ANAC46         <---------MYB52(1)    -- -->MYB46(3)  ------>NtERF2         <---------LBD16------->MYC3        <---------ARR14(2)          -- -->RAV1(1)--------->At4g35610 <---------ALFIN1------->GAMYB  ------>ZmHOX2a(1)<---------MYB46(3) <--   tcccaacccttaaagctgccaagttcacacgcccctctcccgcgttcaacacacgcgcctcctcctctaaacagttcccgtttgttgttgttgttgttgt  17277700         <---------ANAC46                                                                          <-         <---------ANAC58                                                                         <--         <---------ANAC58                                                                      <-----     <---------ANAC58                                                                         -------     <---------ANAC58                                                                        --------     <---------ANAC46                                                                       <--------  <---------WOX13(1)                                               <---------ANAC58         <-------- ---------ICU4                                                     <---------ANAC46        <---------LBD16 --------YAB1                                          <------ZmHOX2a(1)                ---------->DOF2 ---->ZmHOX2a(1)                            <---------KAN4(2)      <---------ANAC58  --------->LBD16 ------->ICU4                             <------ZmHOX2a(1)   <---------ICU4         <---------At4g35610 -------MYB59                            ----------->GT1----------->GT1             --------->ANAC46   cctaattgcttgcttgagagacatagcgatgagactggagaagaggaataaactgaaggagtaaacatggcttgatactagcctctccgctaatgcggga  17277800                                                                                 --------->MYB59                                                                               <---------MYB52(1)                                                                      <---------------AGL15                                                                      --------------->AGL15                        <---------AtMYB61                            ----------------->AG                     <---------ARR14(2)                              ----------------->AGL1                    <------NtERF2<---------HSFB2a(2)                 <-----------------AGL2                   --------->LBD16                       ---------->DOF2      <-------GAMYB ---------DOF2    <---------ANAC46                    --------->LBD16<-----------------AGL1 -------DAG2      <---------DEAR3(1)      <---------At4g35610        <-----------------AG<------ZmHOX2a(1) ----PCF2        <---------LBD16 <---------LBD16     <---------LBD16 <-----------------AGL3 ---->HVH21      --------->At4g35610   <---------At4g35610--------->DAG2     <---------MYB46(3) ->LBD16       <---------DEAR3(1)--------->HSFB2a(2)<---------LBD16  ----------------->AGL2        -- -ANAC58   <-------TEIL --------->ALFIN1  --------->At4g35610        ----------------->AGL3---------- -ANAC58  --------->CCA1(2) <---------MYB46(3)  <------ZmHOX2a(1)  <-----------GT1    <------NtERF2--   ccttttgcagagatacatcggcggagatggtggttctcggaggctgatgaggaaaccgggaaagtgatgtttccacttgtggttaggccgaggaaaagag  17277900                                             <---------bZIP60(2)                                             <---------TGA1a                                             --------->TGA1a                  --------->LBD16                                             <---------ANAC46                --------->DEAR3(1)                               <---------RAP2.6(3)                          --------->ATERF1(1)                              <---------ANAC58                              <---------LBD16                              <---------ANAC46                              <------NtERF2                              <---------ANAC58          --------->ZAT14    ------>NtERF2                            ------>NtERF2    --------->O2                  <---------ATERF1(1)                      <---------DOF5.7(2)    <---------ANAC58             <---------DEAR3(1)   <-----                     <-------TEIL            <---------ANAC55(1)          --------->DEAR3(1)  ------>NtERF2                    --------->DOF5.7(2)      <---------ANAC58            <------NtERF2        -------                   --------->TOE1(3)      <---------MYB52(1)             --------->ATERF1(1) --------                 <---------TOE2(3)        ----------->HVH21             <-----------HVH21 --------->ANAC46                 <---------TOE1(3)        ----------->TGA1            --------->ATERF1(1) <---------DEAR3(1)                --------->MYB52(1)       <-----------HVH21         <------ZmHOX2a(1)      --------->O2 ------->ANAC58 <---------DOF5.7(2)     <---------ANAC58<---------ZAT14 <---------ATERF1(1)<---------ATERF1(1) >DOF2  ----------->GT1 --------->ANAC46<---------ANAC58<---------ZAT18<---------DEAR3(1)<---------LBD16 ------->ANAC58 <-----------GT1------>NtERF2 <---------O2      <---------ANAC46<------NtERF2---------   caagcgagaagagtgaattaacgttcacgatgccgtctatagccgtgacgtggattagtgtagttgggaggagtcgtcgccggagaaattccacggcgcc  17278000                                                   <---------WOX13(1)                                   --------->HSFB2a(2)     <---------WOX13(1)    ---------->DOF2       --------->ATHB12 -NtERF2                 <---------YAB1         <---------YAB1 ---->RAV1(1)          --------->YAB1         --------->YAB1                                      <-- ->DEAR3(1)    <---------ARR14(2)  <---------HSFB2a(2)                         <---------------AGL15 >RAP2.3(1)    --------->ARR14(2)  ------>ZmHOX2a(1)                  ----------->GT1   ---------->DOF2   attggagattgccatcaaatctgaatcgttatagctcctagacaacaattttgattgagagagatagaaatttagtaattcatatttagagaaagtttag  17278100                                                                           <------ZmHOX2a(1)                                                                 --------->ANAC55(2)                                                                 <---------ANAC55(2)                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                 <---------TGA1a                                                                 --------->TGA1a                                                                 <---------O2                                                                 <---------bZIP60(2)                                                                 --------->O2                                                                 <---------bZIP60(1)                                                                 --------->TGA2(1)                                                                 --------->bZIP60(1)                                                                 <---------TGA2(1)                                                                ----------->STF1                                                               <---------TGA2(2)                  ---                                                              ----------->TGA1                    ---                                                              ----------->HVH21                   ---                                                             <-----------HVH21                   <---                                                            --------->ANAC55(2)                  ----                                                            <---------ANAC58                ---------                                                            <---------ANAC55(2)             ---------                --------->HSFB2a(2)                     <------------CBF--------->LBD16     <--------                <---------ANAC46                       <---------ICU4   --------->HSFB2a(2) ---------                <---------HSFB2a(2)       <---------ANAC58  <---------ANAC46              <----------               <---------LBD16            <---------ANAC58  <---------ANAC58           ----------->HVH21 --------DOF2*TSS--------->LBD16          <---------ANAC46  <---------ANAC55(1)     --------->MYB52(1)   cttttagttgtcagttttccggagactgtgggaaaatgtgagtagcgtagaagctaagtattgcgtgacgtctccgaggaagaaaacgacggacaggtaa  17278200       <---------ANAC55(2)   <------ZmHOX2a(1) ------>ATHB12 ------>YAB1                         <---------------AGL15                                         -- ----->HAHB4                         --------------->AGL15                                       <--- ------YAB1                  <---------DAG2                                                      ---- ----->ICU4       --------->ANAC58   <----------DOF2              <---------ANAC46              ----- >ANAC58          --------->ANAC58   ================================================================ >ANAC58      --------->ANAC58     ---------->ID1                <------NtERF2                <------ -ANAC55(2)   --------->ANAC58    <-----------GT1           --------->ANAC55(2)            <--------- >ANAC55(2) ------->TEIL   ------->TEIL                    <-------TEIL                  ---------->ID1 -RAV1(2)--------->DOF5.7(2)--------->HSFB2a(1)<----------DOF2 <---------DEAR3(1)<---------AHL20(2)--   tgataggaaacgtgaaccgcaaggtatcgaaccttttttcttttttgggcttttgtatcgatacgtcgtcgtagaggtcatatttttttttgtcttttac  17278300    --------->ZAT6  ----------->RAV1(1)                                                                           <---- --------->MYB46(3)                                                                            <----- ---->MYB46(1)                                                                                 <----- ------MYB59                                                                                   ------ ----->MYB46(3)                    --------->YAB1                                             ------- ---->ANAC46             <---------AHL20(2)                                 ----------->GT1   <------ ======================MADS_MADS   --------->ATHB12          <---------ARR11(3)   --------->GLK1(2)<- -----GT1           <---------AHL20(2)                 ----------->GT1  --------->ARR11(3)    ------- -DOF2 --------------->AGL15      <---------YAB1  --------->YAB1      <---------AHL20(2)     -------- ---->MYB83        --------->AHL20(2)     <----------DOF2    --------->ARR11(3)   --------->ARR11(3)   ccaacaacactaattagagaattttatataatctctatgattagcttttctataattttgtaaaatcttcatataatcttgtaaaatctgtctaaatata  17278400                      <---------AHL20(2)                    <---------YAB1 -----ICU4        --------->AHL20(2) ----AHL20(2)     <---------AHL20(2) ----YAB1         --------->ATHB51                    <-----------HVH21 --->AHL20(2)     <---------ICU4                 --------->ZAT14 -->AHL20(1)     --------->ICU4                  <---------ZAT14 ---AHL20(1)   --------->YAB1                --------->bZIP60(1)           <-----------GT1 ----------GT1<---------AHL20(2)         <---------WOX13(1)               ----------->HVH21 -->AHL20(2)  --------->AHL20(2)       <---------MYB46(3)         ---------->DOF2 ->YAB1   <---------YAB1<-----------GT1--------->ATHB12       <----------DOF2      ------>ZmHOX2a(1)   attacaaactttgtcattaattatttttatctcttagagggtgattgacatcgcactgtcaagactttaaaagcatttgacagtccttacagcatttttt  17278500                                                    <---------AHL20(2)            <---------MYB52(1)                    <---------RVE1(1)                          <-------           <-------GAMYB                         --------->ARR11(3)                   --------->ANAC58          ----------->GT1                        <---------GLK1(2)                    --------->ANAC58     --------->YAB1                      ---------->DOF2  <-----------GT1           ---------->DOF2   catacaatcagactgttatttgtttttgctcttatacagtcttaaaagtcagatttttttttactctctgtaacttcatttttatctaaagccatgtaat  17278600  Previous    Next  AGI:  At3g46890.1    Description:  similar to MEE60 (maternal effect embryo arrest 60) [Arabidopsis thaliana] (TAIR:AT5G05950.1); similar to unknown [Populus trichocarpa] (GB:ABK93673.1) Range:  from: 17277326    to: 17278113    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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