Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->ANAC58               --------->ANAC58       <---------ETT(1)                                                                            <-       ------->GAMYB                                                                               --      --------->DEAR3(2)                                                                      -------      <------------AtMYB77                                                                    -------      --------->MYB46(3)                                                                      -------    --------->ARR14(2)                                                                      <--------    --------->MYB52(1)                                                                      ---------    <---------ARR14(2)                                                        ------>ZmHOX2a(1)<-----  --------->At5g28300                         <---------ALFIN1         --------->ARR14(2)   <-------- ------NtERF2  --------->ANAC46             ------>ZmHOX2a(1)          <---------ARR14(2)   --------- ---->NtERF2 <---------ALFIN1      <----------DOF2                  ================================= -------ALFIN1------->GAMYB       <---------DAG2  <----------DOF2   ------->GAMYB   ------->TEIL ---- --DOF2--------->DREB2C(2)     --------->ANAC46  <---------DAG2    --------->MYB46(3)     <---------ALFIN1   gcaccgtaaccgacaacaccccattctccatactcgcctttacttcctccacctttgcattctctggcaaccgaaacctcctcatgaacttcccacttga  16995400                <-------MYC3   <---------ALFIN1 --------At4g35610  <-----------GT1 ------->At4g35610<-----------HVH21 -->WRKY38(1)   ------->MYC3 -->WRKY12     <---------O2                                                                  -------- ---->HVH21    --------->O2                                                                  <------- -TGA1a      <---------ANAC46                                                              <--------- >TGA1a--------->ANAC46                                    --------->At4g35610            --------->AtMYB61 ----WRKY18(1) --------->TGA1a                           <---------CCA1(2)          --------->AtMYB61 -O2 <---------ALFIN1                                   <----------DOF2             ------->GAMYB >O2<---------REM1(2)                              <---------At5g28300              ================= =MYC_MYB   <------NtERF2                        ----------->HVH21                 --------->MYB46(3) ---->ZAP1 ------>NtERF2                       ------>ZmHOX2a(1)       <-----------GT1 <---------ALFIN1   ccgctccacacggtgccatgtgtcactcttctcttcattctcactgctcctctcaccgcttatctgaagtatgttaccatcttcaacctccaccttcacc  16995500                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  ---                        ------>NtERF2                                                             <--                        <------NtERF2                                                        ------>ZmHOX2a(1)                      --------->SPL7                                                     <-------PIF5                    <-------PIF5                                                         ------->PIF5                    ------->PIF5                                                        --------->ANAC58                    <---------SPL7                                                      --------->TGA1a                   --------->TGA1a                                                      <---------O2                   <---------TGA1a                                                      =============                   --------->bZIP60(2)       <---------At4g35610                        --------->O2                   --------->ANAC58          --------->At4g35610      <---------ANAC58  <---------TGA1a                   --------->ANAC58        <-----------RAV1(2)   <----------DOF2        --------->ANAC58                   =================================bZIP_DOF     <---------DAG2         --------->bZIP60(2)                  <-------TEIL     ------->MYC2              <---------ZAT18        <-----------HVH21                 <------------OsbHLH66   <----------DOF2     --------->ZAT14        ------>NtERF2<--- ->REM1(1)     --------->ANAC58    <-------MYC2  --------->ATERF1(1)  <---------ANAC58<---------ALFIN1 --ALFIN1      --------->ANAC58    ------->MYC3 <XXXXXXXXXXXXXXXXXXXXMIR319A/B   <---------At4g35610< --HVH21     <-----------RAV1(2)   <-------MYC3--------->ALFIN1  =================================bZIP_DOF ============================MYC_MYB     <-----------HVH21   <---------ZAT14     --------->At4g35610-   tcttccttcttaagcccaggcacgtccgccttgaacacatgcgcttcaggtgtctccctccagtccactttagcgtttgtgaacgctgccacgtccttgg  16995600     <---------MYB52(1)   <---------ANAC46   <---------ANAC58   <---------ANAC58  <-------TEIL                            ------>ZmHOX2a(2) -----MYB83                              <------ZmHOX2a(2) ------->ZAT2                           --------->ARR14(2) ------->At4g35610         --------->ARR14(2) --------ZAT2              --------->GLK1(2) --------At4g35610   <------NtERF2      <---------ARR14(2) -----MYB46(1) <---------LBD16 ==================HOX2a_HOX2a ------>MYB111(1) --------->SPL7  <---------SPL7 -------MYB46(3) ------>NtERF2 =================HOX2a_HOX2a                 --------->MYB52(2)      - ====================MYC_MYB  --------->TOE2(2)                             <---------MYB46(3)      - --------RAV1(2)--------->LBD16------>ZmHOX2a(1)       <---------ZAT6     <---------MYB52(1)   ------ -------PIF5  <---------LBD16 --------->TOE1(2)      ----------->GT1     <-------MYC3         ------- ------>PIF5-------->P     <---------ARR14(2)  --------->SPL7            ------->MYC3------>NtERF2 <-   caggtgcgtttgtcaacccgggcgtcaagaatccttcgaacggatcccatacgtctagtgaaaatgggtcgaacacgtttgttcttcggcctccaaaaaa  16995700                                                                                              <------                                                                                              <------                                                                                              <------                                                                                             <------NtERF2 -------->ANAC58                                                                           <---------DEAR3(1) -------->ANAC58                                                                         <-------GAMYB --->DAG2                                               <---------HSFB2a(2)             <---------ANAC58 --->DOF2                               <---------MYB52(1) <<<<<<<ZML2                  <---------ANAC58 --------LBD16                 <---------MYB52(1)       --------->HSFB2a(2)            <-------TEIL <   gctcggaactagagacatcgtttcgcttactctgtttgctctgttttgttttgttttgctagaactctcttcgaatgcaaacacttatgtgcgttggcgt  16995800                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------               <---------YAB1                                                      <---------MYB52(1)     ----------->GT1                                               <---------TOE2(3)   <----------DOF2 ---ANAC58   --------->YAB1                                        <---------TOE1(3)<---------ARR11(1) ---ANAC58   -------->HAHB4                             <---------ANAC58         <---------ANAC58   < ---ANAC46  --------->ICU4  <------ZmHOX2a(1)           <---------ANAC58         <---------ANAC58   = ---------AHL20(2)        *TSS          ---------->DOF2 <---------ANAC46     <----------DOF2<--------   atttatagggagaaatgatggtagagaagaggataagagatagaaagctctgcaagtttcttgaaatttcaggtttcttctttccgtttctttataacgt  16995900                                      --------->HSFB2a(2)                                  <---------ANAC46                                  <---------ANAC58                                  <---------ANAC58                                 <------NtERF2                                                  -----                             <---------At4g35610                                                -----                             --------->At4g35610                                                -----                             <---------TGA1a                                                 <-------                             --------->TGA1a                                                 --------                             <---------O2                                                    <------- -->ANAC55(2)                --------->O2                                                <--------P ---ANAC55(2)                <---------ZAT2<---------HSFB2a(1)                           --------->ALFIN1 ---ANAC55(1)                --------->ZAT2--------->HSFB2a(1)                         <---------ANAC46 ---ANAC58            <---------GLK1(1)    <---------HSFC1(2)                       --------->ALFIN1 ---ANAC46            --------->GLK1(1)    --------->HSFC1(2)    --------->ANAC58 <------MYB46(1) ---bZIP60(2)        <---------GLK1(2)<---------HSFB2a(2)        --------->ANAC58 <---------ANAC46 ---ANAC58      =======================MYC_MYB            <-------GAMYB           <------MYB83<------ ----------DOF2 -------->P   =====================================MYC_MYB        --------->MYB46(2) ======================================bZIP_DOF          <---------MYB46(3)      --------->MYB111(1) ---GT1  --------->ALFIN1  <-----------RAV1(2)          <---------YAB1--------->AtLEC2<------NtERF2   gtctttcaagagtgtcgctaccagatttctcaggtggcttcaagaagcttctatgttgatggttgagacgacatgcagttcattaggtggggtagtgaac  16996000                                                               --------->ALFIN1                                                              ------->MYC3                                                              <-------MYC3                                                              <-------MYC2                                                              ------->MYC2                                                             <---------ANAC58                                                             <---------O2                                                             --------->TGA1a                                                             --------->O2                                                             <---------ANAC46                                                             --------->ANAC55(2)                                                             <---------ANAC55(1)                                                             <---------ANAC55(2)      <---------MYB52(1)                                     <---------TGA1a    <---------ANAC58                                    --------->WOX13(1)    <---------ANAC58                                   --------->AHL20(2) ---->ANAC46                                           <---------AHL20(2) ---->ANAC58                <---------MYB52(1)        <---------ATHB12 ---->ANAC58                --------->DOF5.7(2)  --------->AtLEC2      --------->YAB1 --WRKY38(1)               --------->TOE2(3)     --------->ANAC58 ----------->GT1              ------ ->ZAT14              ------->TEIL               --------->ANAC58 <---------ANAC46   <----------DOF2 --ZAT18       <---------At5g28300          <-----------GT1  ===================================bZIP_DOF ---DOF5.7(2) <-----------GT1               --------->ANAC46 <---------ANAC58  <---------ANAC55(2)   gccatgccgtttcattttaccatggacttcgttaatgggccttaatacaccatgcaattaatcacgtgttgtataatgaacacttatcttttgttgataa  16996100                                                           <------MYB46(1)                                                          <---------AtMYB61                                                         <--------P                                                       <-----------RAV1(1)                                                     <------MYB46(1)                                                     <------MYB83            --------->AtLEC2                        <---------AtMYB61          --------->YAB1                         <---------MYB46(3)                               <--          <---------ICU4                         <-----------RAV1(1)                              ---         <---------ATHB12                       <---------WOX13(1)                               <---    --------->TOE2(3)                          >>>>>>>>>ARR2                                     <---    --------->YAB1                            --------->ATHB12        --------->ZAT6             ---- --->AHL20(2)     --------->ANAC46           <---------YAB1<------MYB83                          ----   attcaatcttaatcatgcatcagcaactattcttcattatctaaattttgattgttggtgttggtccctgtaagactagagttctcttctcacaaacaaa  16996200                                                                --------->ANAC58                                                                --------->ANAC55(2)   <---------TOE2(3)           --------->ATHB12                 --------->ANAC46 -------ICU4          <-----------GT1                           <---------ANAC55(2) ----->ATHB1       ----------->GT1                              --------->ANAC58                    - ------ATHB51     --------->DAG2          <-----------GT1      <---------LBD16                   ---- ------AHL20(2)  ---------->DOF2   <---------AHL20(2)      ----------->HVH21                <-------- ----->ICU4   <---------ATHB12<---------YAB1             <---------At4g35610              ----------- ----->AHL20(2)--------->YAB1<----------DOF2             --------->At4g35610 <---------MYB46(3)<-----   ttattaagttatagcaatgaaaagttacactctttattgaattttaaccaagaagtcgaagatgacacgggatttttagtggtttgatgaacaagttatt  16996300  Previous    Next  AGI:  At3g46230.1    Description:  ATHSP17.4 (Arabidopsis thaliana heat shock protein 17.4). Identical to 17.4 kDa class I heat shock protein (HSP17.4) [Arabidopsis Thaliana] (GB:P19036;GB:Q540N8;GB:Q94EJ5;GB:Q9LX72); similar to 17.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156) [Arabidopsis thaliana] (TAIR:AT1G53540.1); similar to low molecular weight heat-shock protein [Brassica rapa] (GB:AAB72109.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 16995103    to: 16995826    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version