Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         -------->P                       ------>MYB83                       ------>MYB46(1)                     --------->MYB46(3)          --------->YAB1                     --------->HSFB2a(1)                --------->ANAC58                 <---------ICU4                --------->ANAC58                --------->ANAC58           ------>ZmHOX2a(1)                   --------->ANAC58    --            --------->ANAC58         <----------DOF2--------->YAB1    --------->At4g35610      <-----  --------->ATHB12   <---------MYB111(1)  --------->TOE2(3)    --------->MYB46(3)   <---------HSFB2a(1) ----P      --------->ANAC58     <---------CCA1(2) <---------YAB1     <---------At4g35610 ------>ZmHOX2a(1)   agactaattggaacaagtaagcaccaactagacttatctcttttcctaaaatcatcatactaagaaccacttagctaaatccagcaatgttcctatgaag  16375000                                               --------->YAB1                       ---------->DOF2         --------->AHL20(2)            ------>MYB83 --------->ANAC58   --------->YAB1            ------>MYB46(1)          ---------->DOF2         <---------DAG2          <---------MYB111(1)     <------ZmHOX2a(2)          <---------------AGL15          <---------MYB59--------->ANAC58--------->YAB1   <---------CCA1(2)                   -------          <---------MYB46(2)     ------------------------>ANAC81                             -------- -------->DOF2 --------->TOE1(2)<------ZmHOX2a(1) ---------->DOF2                         --------->MYB46(3) -----ID1 --------->AtMYB61 ---------->DOF2 ----------->GT1  --------->TOE2(3)   --------->ANAC46   acaaaggagataccaaacccaagaagaaagcaaaggatcaaaagaataataaaaaagcttataccttatgaagatggaacttcacatcatcaacaacaac  16375100         ----------->HVH21                                      --------->GLK1(2)       <---------ANAC55(2)                                      <---------ARR14(2)       --------->ANAC55(2)     --------->TOE2(3)                --------->ARR14(2)     <-----------GT1           --------->TOE1(3)                <---------ARR11(3)  --------->bZIP60(1)       <---------ARR14(2)                  --------->ARR11(3)  <---------bZIP60(1)  --------->AtLEC2                        <---------GLK1(2)  <---------TGA2(1)  <---------ANAC58                       <------ZmHOX2a(1)  --------->TGA2(1)  <---------ANAC46                     <---------TOE2(3)  <---------bZIP60(2) ---->RAV1(1)        <---------ANAC58                     <---------TOE1(3)  <---------ANAC58       - ->MYB46(3)       ------>ZmHOX2a(1)                   <----------DOF2        <---------ANAC58      --   agtgatatcacttgacagtcctgtcttgcaaaacctgaaaattccaattccagtctctttaaggagaatctttgaaatgacttggcaagtgaagaattga  16375200                               <---------DDF1                              >>>>>>>>>>DREB1B                              >>>>>>>>>>DREB1C                              ------->GAMYB                              >>>>>>>>>>DREB2A                              >>>>>>>>>>DREB1A                              >>>>>>>>>>AtTINY2                              --------->At1g77200                              --------->DREB2C(2)                             --------->DEAR3(2)                            --------->MYB52(1)                         <---------At4g35610                 <---------ARR11(3)                 --------->ARR11(3) --------->YAB1           <----------DOF2  -------->P  --------->At4g35610    --------->At4g35610      --------->At4g35610  <---------At4g35610    --------->ZAT2           <---------At4g35610                  ----------->GT1 -------->DAG2 <---------TOE2(3) --------->bZIP60(1)                                  --------------- -------->DOF2 <---------TOE1(3) <---------bZIP60(1)------->GAMYB              --------->At4g35610   ataaagctgcaaactttaaggtctctgagctaccgacatcataaaactggacaactgaatgaagtttggacagaacccatgaactgaaattgtataaaac  16375300                                                                                            ---------                                                                                            ---------                                                                                          <---------bZIP60(2)                                                                                          <---------ANAC58                                                                                       ----------->HVH21                                                                                      <-----------HVH21          --------->ANAC46                                                           ----------->GT1          --------->AtLEC2                                                           --------->At4g35610          --------->ANAC58                    <---------ATHB12                       <---------ANAC55(2)          --------->ANAC58                   ------>MYB83                          <-----------RAV1(2)       <-------TEIL                          ------>MYB46(1)                     ----------->RAV1(1) --------->ANAC81      ---------->DOF2  <-----------GT1                    <----------DOF2<---------ANAC58   aaacacacatacatgcaaatagtgagaaagagagagaggtttgtaccaatcgttcccttctctgtgaaactcagagactttagcaacaggtgacatgcct  16375400                                                                                                   --                                                                                                   --                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                               ------                                                                 ----------->GT1               ------       ---------->DOF2                    <------------CBF      --------->ANAC58      <---------AHL20(2)  ----------->GT1                       <---------YAB1          --------->ANAC58     --------->AHL20(2) >ANAC58     ------------>CBF         --------->YAB1       ----------->HVH21  ---------->DOF2  ------ >ANAC58     <---------MYB59      <---------YAB1   <-----------HVH21    --------->AHL20(2)    ------>ZmHOX2a(1)   cagagagagaaaagacccaattccactcacagaaatatgatcaaaattgaaactttcacatctcacaaggaaaattaaaacaaagaatttaaaatcctac  16375500 ---->MYB46(1) ---->MYB83          <---------AHL20(2) ------MYB111(1)     <---------AHL20(1) ------MYB59         --------->AHL20(2) ----->MYB46(3)      --------->AHL20(1)                   --------->ANAC58 ----->AtMYB61    --------->YAB1              --------->TOE2(3) ------MYB46(2)  --------->ICU4               --------->TOE1(3)                       >>>>>>>>>TBF1 ------MYB111(2) <---------YAB1               <----------DOF2                      >>>>>>>>>TBF1 >MYB46(1)     --------->YAB1        <----------ID1       --------->ANAC58      >>>>>>>>>TBF1 -->P         <---------YAB1         ----------->GT1     --------->DAG2      >>>>>>>>>TBF1        <-- >MYB83   ----------->GT1         ---------->DOF2       ---------->DOF2   >>>>>>>>>TBF1    ----------   caaacccatagagagtataataataaaatggaagagaaaaggagaaaactttaaaacaaaaagcaaattctaagaagaagaagaagaagaagaaacaatt  16375600                                                                                         <----------DOF2                                          --------->ANAC58                       <---------ANAC46                                          --------->ANAC58                     <---------ANAC46                                     --------->ANAC58                          <---------ANAC58                                     --------->ANAC58                          <---------ANAC58                                     --------->bZIP60(2)                     <---------ANAC46                                     <---------bZIP60(1)                     <---------ANAC58                 ---------->DOF2     --------->TGA1a                         <---------ANAC58               --------->YAB1        <---------O2                           --------->ALFIN1      <---------ICU4    <---------ANAC55(2)                                 <---------AtMYB61     <---------YAB1     --------->ANAC55(2)                                --------->ZAT14     <-----   --------->YAB1==============================bZIP_DOF                    <---------ZAT14     ------ -------YAB1  <---------ATHB12       --------->O2--------->MYB52(1)------------>CBF   ------->TEIL -->CBF--------->WOX13(1)            <---------TGA1a          <-----------RAV1(1)--------->ALFIN1   tttattcatcattcaaatcaaaagtcacataagagagagacgtcaagaaaccaaggggtcgtttttgtgggcaatagtgtggtgtgtggacctttacagc  16375700          ---------->DOF2         ------->GAMYB        --------->MYB46(3)                --------->AHL20(2)       -------->P          --------->ANAC58      --------->WOX13(1)   --------->ANAC46                       --------->ZAT6                   <- ----At4g35610             --------->ANAC58                 <----------DOF2                <---------ANAC58 --->At4g35610      XXXXXXXXXXXXXXXXXXXX>MIR835-3P      <----------DOF2                    <---------ANAC58   taaaaaatcaaccaaagacagaagaaaacacacaaaaacgattttaaaatacaaaatactttcttttttcactaaaattgaaaacaaacaatttcttggt  16375800                                ----------->GT1                                <---------ZAT6                            ---------->DOF2                             <---------HSFB2a(2)                       --------->HSFB2a(2)                         <----------DOF2                               <---------HSFB2a(2)           ---------->DOF2   --------->HSFB2a(2)                     ------>ZmHOX2a(2)    <------MYB46(1)  <---------CCA1(1)                              <------ZmHOX2a(2)    <------MYB83     --------->GLK1(1)                    <---------YAB1--------->LBD16   --------->MYB111(1)--------->ARR11(3)                 --------->AHL20(1)   --------->MYB111(2)<---------ARR11(3)                 <---------AHL20(1)   --------->MYB46(2)<---------RVE1(1)                   <---------AHL20(2)    ---------->DOF2      -   <---------MYB46(3)<---------GLK1(1)          --------->DAG2     --------->ARR11(3)           <----   --------->MYB59   --------->CCA1(1)         ---------->DOF2     <---------ARR11(3)     ---------->ID1  <--------P         --------->RVE1(1)     =================================HOX2a_HOX2a  <-----------GT1  <---------MYB55(1)<---------ARR11(3)     ================================HOX2a_HOX2a -------------- --------AtMYB61    --------->ARR11(3)     <------ZmHOX2a(1)  <---------AHL20(2)   ----------->GT1<--   tttggtaggtactaaaagaatagatatctttctagagtgaattcaggacaaaagtggattatatttatagatcccagaaagaaaagggttttttccttct  16375900  Previous    Next  AGI:  At3g44820.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT1G30440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16706.1); similar to putative non-phototropic hypocotyl 3-like protein [Ipomoea trifida] (GB:AAS79592.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 16372851    to: 16375396    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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