Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <------NtERF2             --------->ALFIN1             <---------RAP2.6(2)            --------->ATERF1(1)           <---------bZIP60(2)                                --------->GLK1(1)                  ----          --------->ALFIN1                     <---------At4g35610            <------ZmHOX2a(1) -----      <------ZmHOX2a(1)<---------TOE2(3)       --------->At4g35610<---------ANAC58             ------ -->HVH21 <---------AtMYB61     --------->GLK1(2)             <---------GLK1(1)              <------- >RAV1(2)<------ZmHOX2a(1)     <---------GLK1(2)  ---------->DOF2 <---------ANAC58           <------ZmHOX2a(1)   caggcataggaggaggtggccgattaatgttcaaattctgcatattagcagctaaagaattggggtttccttgtgaaccaggaacaaaattcggaggacc  16030800                                                   --------->RAP2.3(3)                                                 --------->At4g35610                                                 --------->ZAT2                      <------MYB46(1)            <---------At4g35610                      <------MYB83       <------NtERF2          <---------YAB1            ------>ZmHOX2a(1)               ---------->DOF2             ----- ------->RAV1(1)     --------->MYB59--------->HSFB2a(2)   <---------ANAC58     --------->MYB46(3)  -- ---->AtMYB61   <---------YAB1      <---------HSFB2a(2)   <---------ANAC58 <------ZmHOX2a(2) -------- --->MYB46(3)<---------WOX13(1)    <---------LBD16--------->ATERF1(1)     <---------ARR11(3) -------- --PCF5 <---------At4g35610       ----------->RAV1(2)   <---------YAB1    --------->ARR11(3) <-------   accagagttttgctgattgttattaggtctatatgctcctggaggcactggagcagccatgcttgtttaccaaagagatcaacaaatccaatttcacgaa  16030900                                       --------->YAB1                                       <---------ICU4                                      <---------ATHB12                                    --------->WOX13(1)                                --------->YAB1                               <---------YAB1                              --------->ARR11(3)                                   <---------MYB52(1)                              <---------ARR11(3)                                 ------->GAMYB        --------->TOE1(2)    --------->YAB1                                   <---------ARR14(2)      --------->ARR14(2)    <---------YAB1                                    --------->MYB52(1) -->TEIL--------->TOE2(2) --------->YAB1                                      --------->ARR14(2) ------->DOF5.7(2)        <---------ICU4                           <------ZmHOX2a(2) ->ANAC58               --------->ARR11(3)                 <----------ID1 ----------------->AGL1 ->ANAC58         ----------->GT1 <---------YAB1  <-------TEIL    --------->ARR11(3) --MYB52(2)--------->ANAC46 --------->ICU4   --------->MYB46(3)   <---------ARR11(3)      <------ZmHOX2a(2)   cgtttacaaatctacgaaaatcgaaaaatcatgatcatcaatcatcaacaaatgcatcaaaacaacaagatcaaattccataaccgtaagcgatcagtga  16031000                                                                                     ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                    --------->CCA1(2)                                                          ----------->HVH21        --------->AGP1                                                       ======================HOX2a_HOX2a                                                       ------>ZmHOX2a(2)           <---------ARR11(3)                                                       =============================HOX2a_HOX2a                                                      ==============================HOX2a_HOX2a                                                      <------ZmHOX2a(2)            --------->ARR14(2)                                                      =======================HOX2a_HOX2a                                                     --------->ARR14(2)            <---------AGP1                                                     <---------AGP1                --------->ARR11(3)                                                     <---------ARR14(2)            <---------ARR14(2)                                                    <---------CCA1(2)             <---------CCA1(2)                                                  --------->TOE2(1)              ----------->ARR10                                                  --------->TOE1(1)            <------ZmHOX2a(2)                                                 <---------LBD16             <------ZmHOX2a(1)                                                 =============HOX2a_HOX2a    ==============HOX2a_HOX2a                                                 ------>ZmHOX2a(1)           ===============HOX2a_HOX2a                                                 =====================================HOX2a_HOX2a                                                --------->TOE1(2)     <------ZmHOX2a(1)--------->At4g35610                                             --------->ARR14(2)       ======================HOX2a_HOX2a      ----------->GT1                        <---------ARR14(2)       =====================HOX2a_HOX2a   --------->GLK1(1)                         --------->GLK1(2)        ================HOX2a_HOX2a   tacagaaatcgaaaattgaagaaatcgaaatacctgtaaacgaagagaatcctcggatctgtgacaatgagaggaaataggatcagatctgatgaattcg  16031100                                                                                    <---------LBD16                                                                                   ----------->RAV1(2)                                                                                  --------->GLK1(2)                                                                                  ------->TEIL                                                   --------->ICU4              --------->ANAC46                                                   <---------YAB1              --------->ANAC58                                      --------->YAB1                           --------->ANAC58                         <------ZmHOX2a(2)    <------MYB46(1)               =========================                        --------->ARR11(3)    <------MYB83                  <------ZmHOX2a(2)           <---------TOE2(3)       --------->ARR14(2)                      <---------ARR11(3)           <---------TOE1(3)       <---------ARR14(2)                      --------->ARR11(3)     <--   aattgaaacgattaaggtttaagagagatcaagagagtaatcgcaatttggtgatgaataagagcaaatgcaacgaagatcacgaacctggagagtagaa  16031200                                                                                   <---------YAB1                                                                                   <---------AHL20(2)                                                                              <---------ANAC58                                                                              <---------ANAC58                                                                              <---------ANAC46                                                                            <---------ANAC46                                                                          <-----------HVH21          <----------DOF2                              <----------DOF2   <-----------RAV1(1)     ----     <---------ANAC58                       --------->CCA1(2)       --------->YAB1--------->AHL20(2)     <---------ANAC58                    *TSS      --------->ZAT18 <---------AHL20(2) <---------WOX13(1) ====HOX2a_HOX2a                  <------ZmHOX2a(1)<---------PCF2----------->TBP <----------DOF2 <--- ----ZmHOX2a(1)               <------ZmHOX2a(1)    <---------ZAT18--------->AHL20(2) <------------CBF   ggagattacgagctttgagtatcgatgagtgaggaaggagaagaagctatgagggccctttgaagctatataatactgtcgcgttttaattgaaactggt  16031300                                       --------->LBD16                                       ----------->GT1                                     <---------LBD16                                     ------>ZmHOX2a(2)                                    --------->CCA1(2)                                    --------->ARR14(1)            <---------MYB52(2)      <------ZmHOX2a(2)         <---------AtLEC2          --------->ARR11(3)     <-------GAMYB                 --------->ARR14(2)    <---------ANAC58               --------->ARR11(1)    <---------ANAC58             ----------->ARR10       --------->ANAC58    --------->MYB52(2)   --------->ANAC55(2) --------->YAB1         --------------->AGL15   <-------TEIL    --------->LBD16 --------->AGP1        --------->ANAC58   --------->ABI4(2)     <---------ANAC55(2)<---------YAB1          <----------DOF2 ----->MYB52(1)   --------->ANAC46 <---------AGP1       --------->SPL7    ----------->GT1 <---------MYB52(1) ------DOF5.7(2) --------->TOE1(2) <---------ARR14(2) <---------SPL7<---------DAG2     <---------LBD16   aacggtgcgttgcatcgaacccgagacacttgatatagatccggttataatagaaccggacgctcgtctacttttttggttaattttagtccggttctca  16031400                               --------->YAB1                      <---------MYB52(1)                    ----------->GT1                    <------MYB83 ---------->DOF2                    <------MYB46(1)                 ---------->DOF2                        >>>>>>>>>MYB98                   --------->MYB59      ----------->GT1                                   <----------           <----------DOF2    <---------YAB1     <---------ANAC55(2)                     <-----------GT1         <------MYB46(1)   <---------AHL20(2)--------->ARR11(3)                         --------->AHL20(2)         <------MYB83<-------GAMYB    ---------->DOF2     ---------->DOF2         --------->YAB1   tgttatttgttcggtttaagttcggttatataatgaaaaggaaagtatatcatgtaaagggaaagtatgacatagtctatccaattagaatttaacatat  16031500                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                 ====================                                                                                 <------ZmHOX2a(1)                                                                              --------->HSFC1(1)                                                                              <---------HSFB2a(2)                                                                              --------->HSFB2a(2)                                                                      <---------AHL20(2)                         --------->YAB1     --------->GLK1(2)     <---------AHL20(2) --------->AHL20(2)               <-----------GT1<---------------AGL15           <----------DOF2 <---------HSFC1(1) -GT1         <---------AHL20(2)     ----------->GT1     <------------------------ANAC81           --   catttctattttgtatttaacttgatttcataacaaaattagaaaaattctattctctctgttcctttttatttgattttctaggaaaaaaatttgcttc  16031600                 <---------ICU4                ------>ZmHOX2a(1)                            <----------DOF2          <----------DOF2                                <----------DOF2                         <---         ------>ZmHOX2a(2)                         --------->AHL20(2)                            ----         ==============HOX2a_HOX2a                 --------->YAB1                          --------->YAB1       --------->ARR11(3)                       ------>ZmHOX2a(1)                       <---------AHL20(2)       <---------ARR11(3)            <----------DOF2  --------->ARR11(3)               <---------AHL20(1)    <---------WOX13(1)              --------->TOE2(3) <---------ARR11(3)               --------->AHL20(1) ===============HOX2a_HOX2a       --------->ARR11(3) <---------CCA1(2)                 --------->AHL20(2) -------->DOF2 <---------MYB59    <---------ARR11(3)<---------AHL20(2)                 <---------AHL20(2)   aaaaagattgatcttttcctaatttctatgcataaatacctttatatttcctattatatctttctttattctttgtatttgttttcaaatttattagaat  16031700  Previous    Next  AGI:  At3g44340.1    Description:  CEF (CLONE EIGHTY-FOUR); transporter. Identical to Protein transport protein Sec24-like CEF (CEF) [Arabidopsis Thaliana] (GB:Q9M291); similar to sec23/sec24 transport protein-related [Arabidopsis thaliana] (TAIR:AT4G32640.1); similar to sec23/sec24 transport protein-related [Arabidopsis thaliana] (TAIR:AT4G32640.2); similar to Protein transport protein Sec24-like CEF, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA93724.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39034.1); similar to hypothetical protein OsJ_032573 [Oryza sativa (japonica cultivar-group)] (GB:EAZ18364.1); contains InterPro domain Sec23/ Range:  from: 16022608    to: 16031241    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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