Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------AHL20(2)                             <---------ANAC46                                       <---------ZAT18     <---------YAB1<---------DAG2    <---------ICU4                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)     <---------AHL20(2)  <---------ANAC58                   ----------->GT1         --------->ZAT18   --------->TOE2(3)     <---------ANAC58    --------->AHL20(2)     <-----------HVH21    --------->TOE2(3)   <----------DOF2 <----------DOF2  <---------ATHB12      ---------->DOF2       <------NtERF2   caaaactttaattgcaaaaaacttttttcttgtgtctaataaatccattaaacacatccccaaagttaaatgtcaatggggcagagtgcaaccttgttta  15942700                                                                                               <xxxxx                                                                                           <---------                                                                                           ==========                                                                                           <---------DAG2                                                                                           <---------                                                          <---------AHL20(2)             <---------TOE1(2)                                                          --------->ATHB51           <---------HSFB2a(2)             <---------AHL20(2)                           --------->AHL20(2)         --------->HSFB2a(2)             --------->AHL20(2)                           <--------ATHB1             --------------->AtSPL8            --------->ICU4                                <---------ICU4      <---------AHL20(1)  <--            <---------YAB1                               --------->ICU4       --------->AHL20(2) <---          <---------ICU4                                 <---------YAB1       <---------AHL20(2)-----       --------->ANAC55(2)    <-----------RAV1(1)      --------->YAB1 <---------ANAC58--------->TOE1(1)     <---------AHL20(2)--------->ANAC55(2)   <---------ANAC58         <---------ANAC58--------->TOE2(1)     <-----------GT1   <---------ANAC55(2)   <---------ANAC58   <----------DOF2      --------------->AtSPL3   ctcttatttacataattaatagcttaagtaacatgttggacaatttcgcttgctccataataatttctttttccttgcattttatttctcgtactttata  15942800                                  --------->ANAC58                                  --------->ANAC46 xxxxxxxxxxxxxxxxxxsmallRNA(i2)   --------->ANAC58 ------AGL15                    --------->AtMYB61           <---------ANAC46 =========================================================MADS_MADS                      ---------->DOF2 -DOF2                          ----------->RAV1(1)      --------->ALFIN1        ----------->GT1 -------YAB1       <---------TOE1(1)                   <-----------RAV1(1)  ----------->TBP ------TOE2(3)     <---------TOE2(1)      --------------->AGL15             --------->AHL20(2)      - ---->YAB1       <-----------------AGL1   <---------------AGL15             <---------AHL20(2)  <----   atgttagacaaactctttggtccgatgtggaaaaccacacaagacttaatttagtaaatgtggggtttaccaaaacatataaatagttaaacaaagtaga  15942900                                                          --------------->AGL15                                                          <---------------AGL15                                                         ----------------->AGL3                                         <---------AtLEC2----------------->AGL2                     -                               <------------CBF  <----------DOF2          --------->ICU4            < ---------->GT1       ---------->DOF2    <---------ANAC58<-----------------AGL2        ---------->ID1 --------CBF     ---------->DOF2         <---------ANAC58<-----------------AGL3   <----------DOF2  --   ttgggttattagtttgggttaaagaaaagcttgaattggttttgcatgttcctttgcattctaaatatagttagtcatgtttttcttttgtcacatttat  15943000              --------->YAB1             <---------YAB1                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           --------->YAB1                           <---------DAG2          <---------AHL20(2)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->AHL20(2)            --------->YAB1        <---------YAB1       ---------->DOF2   ----------->GT1                     <---------YAB1    --------->TOE2(3)       --------->ANAC46  <---------TOE2(3)            --------------->AtSPL8<----------DOF2            <xxxxxxxxxxxxxxxxsmallRNA(i) ----->ZmHOX2a(1)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------------>CBF  --------->ANAC58 ---------MYB52(1)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<----------DOF2      --------->ANAC46 ------->TOE2(3) ---------->DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->ANAC58------   tccttaggttaatttataataaaggaggtatttcatgtactatcattccttctccctttcctttacaattagttgaaaaacacacaaaagtcgctcaaca  15943100                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                       --------->HSFB2a(2)                               --------->TOE2(3)                   --------->LBD16 <----------DOF2 <-                             <---------ATHB12                     <---------HSFB2a(2)<---------ANAC46                            ------>MYB83                   <-----------GT1 ----------->ARR10  xxxxxxx                            ------>MYB46(1)            <---------YAB1  --------->At4g35610<---------ARR14(2)                          <---------MYB46(2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <------- --->MYB46(3)             <---------MYB59           <---------ATHB12   <---------At4g35610--------->TCP20   acttgtgtaacaagagcaaaatggattaccaaacattagagattgaagacccaaatgatgttaacattcccgatgctgagaactgctttgtggaaccagg  15943200                                    --------->TOE2(3)                                    --------->YAB1                              --------->ANAC58                              --------->ANAC46                              --------->ANAC58                             <---------ZAT18    --------->ZAT18          --------->SPL7                                                         <    ------>NtERF2            --------->ZAT18                                                       <- <---------At4g35610       --------->ZAT14                                                         -- --------->At4g35610       --------->ARR14(2)                                                    <--- -----MYB83             <---------ANAC58                                                         <xxx ----->ALFIN1           <---------ANAC46                                                        ----- -----P    --------->ZAT14 <---------ARR14(2)                 <---------ANAC58               <------- -----MYB46(1)      ------>ZmHOX2a(1)                         <---------ANAC58               -------- xxxxxxxxx>smallRNA(i)  <---------ANAC58  <-----------GT1     <---------ANAC46              <-------- ----RAV1(2)<-----------GT1--------->REM1(2)    <---------ETT(2)                        <---------ATHB12   ttgggctgccctgttcaccctcctagccgtgtacgctatcttattttccatcgacaatttgttttcttgtaaggccaacttctcaatccaatctatatcc  15943300         ------>ZmHOX2a(1)      ------>NtERF2     <---------ALFIN1     --------->DEAR3(1)   <---------ATERF1(1)   ------>NtERF2             ------>ZmHOX2a(2)  --------->DEAR3(1)         ----------->GT1                                                    <----  --------->ANAC46         --------->ARR14(2)                                                  xxxxxx <---------LBD16           <---------ARR14(2)                                            <---------ANAC58 ---------ATERF1(1)     --------->ALFIN1                                                 <---------ANAC55(1) --------ARR14(2)     --------->ALFIN1                                                   --------->ANAC55(2) ------->ARR14(2)     <---------ANAC46                                                   <---------ANAC58 --------HVH21    xxxxxxxxxxxxxxxx>smallRNA(i)                                           <---------ANAC55(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    <---------ARR14(2) ---->ANAC46  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)        <----------DOF2              --------->ARR14(2) --ARR14(2)  xxxxxxxxxxxxxxxx>smallRNA(s)             ------>MYB46(1)           ------->TEIL <xxxxxxx ->ARR14(2) --------->At4g35610      <---------AHL20(2)  <---------DAG2        <xxxxxxxxxxxxxxxxxxxxx -CCA1(2)===========================HOX2a_HOX2a       ------>MYB83           <---------YAB1 <--------   gtctccgcctcctcttctgaatcggtgtggatcgtatatttcattgtgaagaaacctagctttatgtgttctatctcttatgaacgcgaatacgtgtcag  15943400                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                        <---------LBD16                                                                  <---------ARR14(2)                                                               --------->ANAC58                                                               --------->ANAC58                    <-                                                               --------->ANAC46                    --        <---------ZAT18                                     <---------REM1(2)                      <-        --------->ZAT18                        --------->HSFB2a(1)--------->ARR14(2)  <---------At4g35610  --------->YAB1                              ------>MYB83 <----------DOF2            <---------ZAT2  --------->TOE2(3)          <---------DOF5.7(2)  <<<<<<<<<<<<<<<<<LFY<-----------GT1 --------->At4g35610 <---------ATHB12 ----------------------->TaNAC69(2)      <---------ANAC58            ----------->RAV1(2) -----At4g35610---------->DOF2                ------>MYB46(1)  --------->ANAC55(2)    --------->ZAT2 xxxxxxxxxxxxxxxx>smallRNA(si3)             --------->AtMYB61 <---------LBD16         <------NtERF2-- xxxxxxxxxxxxxxxxsmallRNA(se3)             --------->MYB46(3)--------->MYB52(1)     <---------RAP2.6(2) xxsmallRNA(fl3)--------->DAG2        --------->ZAT6      <---------ANAC58--------->LBD16       <---- ---HVH21 <---------------AGL15--------->ANAC46<---------HSFB2a(1)<---------GLK1(2)<---------LBD16<--   ccaatcttagtcccctaaaaagtgccattgtaaacgtctctcactaccaacgttccaatggcttcacggatttttccgtggttttcgcggctgagactga  15943500           --------->MYB46(3)          <<<<<<<<<<<<<<<<<LFY          ------>MYB83          ------>MYB46(1)         <---------At4g35610         --------->ANAC58         --------->At4g35610         --------->ANAC58--------->TOE2(3)        --------->MYB46(3)<---------MYB52(1)      <---------YAB1                              -------      XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P        --------->YAB1                                 -------- --------ARR11(3)       ----------->GT1       --------->TOE2(3)                              <------- ------->ARR11(3)  --------->ANAC58          <<<<<<<<<ARR1                           ------>NtERF2 --------ARR14(2)  --------->ANAC58          <<<<<<<<<ARR2                           --------->LBD16 ------->ARR14(2)  --------->ANAC46    <---------ETT(2)                            <---------LBD16 -----TOE2(3)--------->MYB52(1) <-----------RAV1(2)                               <---------At5g28300 ----ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-----------GT1 --------->YAB1<---------ANAC46   ggatattggaccagccaatggaagcaacgttatttcaggtgtctacaatcttaatattacacttctcatgaagcataaacaaattgccgcgaacaacaaa  15943600  Previous    Next  AGI:  At3g44230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22160.1) Range:  from: 15943121    to: 15943735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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