Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->YAB1       <---------ARR11(3)       <---------ARR14(2)                                   ------>ZmHOX2a(1)          <---------ANAC58       --------->GLK1(2)                          <---------ZAT18                      <---------ANAC58       --------->ARR14(2)                         <---------ZAT14                     --------->ALFIN1       <-----------ARR10                        <---------ZAT18                      --------->ZAT14      <---------ARR14(1)                        <---------At4g35610   --------->YAB1--------->ALFIN1      <---------GLK1(2)               <------ZmHOX2a(1)   <---------ZAT18 --------->At4g35610 -------TOE2(3)                   --------->LBD16 --------->ZAT18    ----------->HVH21<---------AtMYB61 ----->DOF2                     <---------LBD16 --------->At4g35610  <---------ATHB12<---------ZAT14   aaggaagagaatcttaagtactgggagagatgtctccggaggaatttttgagcacactagtcctcttcccaatgacagcataaccagtgtggtgctagtg  15847700                                                                                                  ---                                                                  <---------ZAT18                ----                                                                --------->ANAC46                 ----         ----------->GT1                            <---------ALFIN1       --------->ARR14(2)    ----        --------->MYB59                    --------->At4g35610 --------->LBD16  <---------At4g35610        <---------TOE2(3)                  <---------At4g35610<---------HSFB2a(2)  --------->At5g28300        <---------TOE1(3)                 ------->TEIL --------->DEAR3(1)  <---------ARR14(2)  <----- --------->GLK1(2)                     <---------REM1(1)      --------->HSFB2a(2) <---------MYB46(3)   aagaatttgtaaggtaattcaaactgcgaatttatgcatagatgtagctcagagacaccgcgttccagggcattacaaatccagcggttaacaacatcca  15847800                                                                                       --------->ANAC46                                                                                      <---------HSFB2a(2)                                                                                      ------>ZmHOX2a(1)                                                             --------->ANAC58         --------->HSFB2a(2)                                                             --------->ANAC58     --------->ARR14(2)                                                            --------->GLK1(1)     <---------ARR14(2)                                                        --------->ANAC58         --------->GLK1(1) --->NtERF2                <---------DAG2               --------->ANAC58         <---------GLK1(1) ----->ANAC46   <---------YAB1                          --------->ANAC46      --------->ANAC58 ----->ANAC58   <---------AHL20(2)          <----------DOF2---------->DOF2    --------->ANAC46      < ----->ANAC58   --------->AHL20(2)<---------ZAT6       <---------LBD16        --------->ANAC58    <-- ----ALFIN1<-------TEIL    <----------DOF2 <-----------------AGL3       ------>ZmHOX2a(1)      <-----   cgccaagtccaaatgcatataattctctactttttagtgagaacgtctttatatggccacggaaagccaatgtcctctctacgaaatcctcgaaactctt  15847900                                               <---------REM1(1)                          ------->GAMYB      <------ZmHOX2a(1)            --------->ANAC46      >>>>>>>GRF7        <------------MYB.PH3(1)                          --------->ANAC58   <-----------HVH21   <-----------GT1   ---------->DOF2          <---------GLK1(2) ---------AtLEC2    --------->YAB1 --------->LBD16              --------->ICU4 -------YAB1       <---------YAB1 --------->LBD16               <---------YAB1   --------->GLK1(2)  < -----DOF2  <---------ARR14(2)   <---------LBD16        <<<<<<<<<WRKY18   --------->ANAC58    <------   ttgaatgtcaggcctataccgatgataaccgtcttcccggtggaaaaggatgtagtcgtcaatgtcaagattatgcacgagagaatatagagtcttccac  15848000                                                                                               ------                                     <--------P                                                <-----                                <---------ANAC58                                             --------                                <---------ANAC58                                            ---------                         <---------ANAC58                                              ---------->DOF2                         <---------ANAC58          --------->ARR11(3)           --------->ANAC58 ----------DOF2          <---------ANAC46    <------ZmHOX2a(1)    <-------TEIL  --------->ANAC58    < ---ALFIN1    ----------->GT1   <---------ANAC46   <---------ARR11(3)    <------ZmHOX2a(1) <---------LBD16   ctctttgagagaagagaggttgaaactgcttgtttcgtggtaagggaggataagatttcgacaagaagttcatcaggaagacaatccattgaagccggat  15848100       --------------->AGL15       <---------------AGL15                      <---------ANAC58      ----------------->AGL3                      <---------ANAC58      ----------------->AGL2                      <-------GAMYB                           <------MYB83      ----------------->AGL1                     <---------MYB46(3)           --------->At4g35610 --->ARR14(2)                               <----------DOF2                   <---------GLK1(1)     < ----ARR14(2)                              <---------ANAC58          --------->YAB1       <------MYB46(1) ->LBD16          <---------HSFC1(2)       <---------ANAC58          <------ZmHOX2a(1)  <--------P  = >RAP2.6(2)       --------->HSFC1(2)<---------ZAT18              ---------->DOF2        ============= ---------At4g35610              <---------MYB46(3) <---------MYB46(3)        <---------At4g35610<---   tcaactgttccatatcaagaagcttcagttttgagttgttcacttgcttcttggttgttttctatgggaaaggataatggagctctctcggtagggattt  15848200                                 --------->ARR11(3)        <---------ANAC46         <---------ARR11(3)        <---------ANAC58 ------->MYC3        <---------ANAC58 <-------MYC3 <---------AHL20(2)                                            -  <---------YAB1        --------->TGA1a                                                            -- <-----------TBP        <---------O2 <---------AHL20(2)    <-----------GT1                  <-------- ----------DOF2         --------->O2 --------->AHL20(2)   --------->AHL20(2)       ----------->GT1 -- =================================bZIP_DOF         --------->AHL20(2)           --------->GLK1(2)  <- =================================MYC_MYB          <---------AHL20(2)         <---------AHL20(2) ---- --------GT1<---------AtMYB61  <---------YAB1     --------->AHL20(2)    <-----------HVH21  --------->AHL20(2)   aacttttatagcttgtggtcttagccatgtgtcatgatattaattttaaaaatttaaaaattaactatattcagtgtcatataatctgtaatattaaata  15848300                                                                                     <---------YAB1                                                                                    --------->AHL20(2)                                                                                    <-----------TBP                                                                        --------------->AtSPL8                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    <---------AHL20(2)                               <---------TOE2(3)                    --------->AHL20(2)    <---------AHL20(2) -------->CCA1(2)            <---------AHL20(2)                     --------->YAB1  <---------AHL20(2) ------->ARR11(1)        --------->AHL20(2)            <---------------AGL15      <---------YAB1 -AHL20(2)<-----------GT1<---------AHL20(2)--------->ZAT6     ----------->GT1 <----------DOF2 ------->ARR11(3)     <----------DOF2     <---------YAB1 <---------AHL20(2)   <---------DAG2 -------- --------ARR11(3)  <-----------GT1      --------->YAB1 --------------->AGL15------->TEIL --------->AHL20(2) ------->ARR10     <---------AHL20(2)   <---------ICU4--------->TOE2(3) <---------------AtSPL8      <   agatatgagatttaactaaatttacttttaattaagtttccatcatcactaacatttcttaaatttgtaattaaaatgtactttatttttataaaatcaa  15848400                                                                                      ---------------             ---------->DOF2                                                          <--------------     <------MYB83                                                                     <xxxxxxxxxxxxxx     <------MYB46(1)                                                                 ================    --------->MYB111(1)                 <---------AHL20(2)                           <xxxxxxxxxxxxxxx    --------->MYB46(2)             ------>ZmHOX2a(1)                                 ----------------    <---------------AtSPL8        --------->TOE2(3)                                  <---------------    <---------MYB46(3)         <---------ARR14(2)                           <----------DOF2    --------->MYB59            --------->ARR14(2)             ---------->DOF2      <xxxxxxxxxxxxxxxxx    --------------->AtSPL8     --------->ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->YAB1 ---->CBF <----------DOF2      <-----------GT1  <------ZmHOX2a(1) --------->ZAT6<---------YAB1   <xxx ---------ZAT6       <-----------GT1   --------->AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(i)----------------   tagtgtttggtactttaaagacttaaccatatatatcctcattttatataggagaattgacacaaatagcactaaaaactttattatcccaaaaatagca  15848500              <---------HSFB2a(2)              --------->HSFB2a(2)              <---------------AGL15                             --------->DAG2              --------------->AGL15                            ---------->DOF2  <----------DOF2 --------->YAB1                            --------->AHL20(2) >AGL15      ----------------->AGL3                     <---------AHL20(2) -AGL15      ----------------->AGL2                    --------->AHL20(2) xxxxxxxxsmallRNA(le3)          --------->AHL20(2) <---------AHL20(2) =============================MADS_MADS   ------>ZmHOX2a(1)--------->AHL20(2) xxxxxxxxsmallRNA(si3)         <---------AHL20(2)  --------->AHL20(2)          --------->ATHB12 ->AGL2      <-----------------AGL2  <-----------GT1   <---------AHL20(2)     <---------YAB1 --AGL3  <---------HSFC1(2)    --------->AHL20(2)  --------->AHL20(1)       --------->YAB1 xxxxxxsmallRNA(le3)      --------->AHL20(2)      --------->AHL20(2)       <---------YAB1           - xxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------AHL20(2)<---------AHL20(2)    <---------AHL20(2)     ------ ->AGL3  --------->HSFC1(2)<---------AHL20(2)  --------->AHL20(2)       <---------YAB1   --------->WOX13(1)   ccttcttttgaaacttccaaaaatagcataaaatttttttaatcctctataaattaattaaataaaaaagtttttttattatcatttgtatcaatccccc  15848600  Previous    Next  AGI:  At3g44080.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At3g44080 [Arabidopsis Thaliana] (GB:Q9LXQ4); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G44090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63569.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 15846619    to: 15848113    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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