Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              <------                                                                                             --------                  <---------ICU4                                                             <-------                  --------->YAB1                                                            ---------            --------->CCA1(2)                                                          ------>ZmHOX2a(2)         ----------->ARR10                                                            <------ZmHOX2a(2)       <---------At4g35610                               <---------ICU4              --------->ARR11(3) --AHL20(2)<---------ARR14(2)                            <---------GLK1(2)           <---------ARR11(3) -AHL20(2) <---------ARR11(3)                         --------->YAB1        ---------->ID1 <---------YAB1 >AHL20(2) --------->ARR11(3)                   --------->ANAC58  --------->TOE2(3)  --------->AGP1 -AHL20(1) --------->ARR14(2)                   --------->ANAC58 --------->REM1(1)   <---------AGP1   tgaatactcagaagatttgatcatgaactactgaaacaacgtttttggccaagaaataagaatttctacatcaaatttgtccatatagatcttatgatca  15717600                                              --------->ANAC58                                      <---------DAG2         <---------ANAC55(1)                                 --------->WRKY12------->TEIL<---------ANAC58                             <-------TEIL     --------->ANAC46 ----ICU4                    --------->SPL7   --------->ANAC58                                      - ---YAB1                  <---------ANAC58   <---------LBD16 <---------ANAC46                      -- ->ARR11(3)               <---------ANAC58   --------->LBD16 <---------ANAC58                      -- --ARR11(3)              <---------------AtSPL8----------->HVH21                             <------- >YAB1               <----------DOF2  <----------DOF2----------->GT1                ------>ZmHOX2a(1)   ttttcacaaacaaggtttcaatgcttttgggtacgttgaactttttccacggacgttgtaataccgtgtgaagttttattcatgtcctcttgttttttcc  15717700                           ---------->DOF2                        ------>MYB83                                                          -------                        ------>MYB46(1)                                                     ---------                        --------->AtLEC2                                                    ---------                      ------->GAMYB                     <---------WOX13(1)                  <--------                     --------->MYB46(3)              <---------AHL20(2)           <----------DOF2              <---------ANAC55(2)                    --------->AHL20(2)          <-----------------AGL3              --------->ANAC55(2)                    --------->AHL20(1)          <---------DAG2              <---------ANAC55(1)                   <---------AHL20(2)       <---------ATHB12 ------>ZmHOX2a(2)              <---------ANAC46                 ------>ZmHOX2a(2)             --------->MYB46(3)     < ------>GAMYB <---------ANAC58   <------ZmHOX2a(1)  --------->AHL20(2)     --------->WOX13(1)<------ZmHOX2a(2) ------->ANAC58    <-----------GT1           --------->ARR11(3)        --------->GLK1(2)    <-------- ------->ANAC58 <---------------------WRI1   <---------ARR11(3)      --------->HSFC1(2)    <------ZmHOX2a(1) ----GT1      <---------ANAC58   =====================HOX2a_HOX2a    --------->HSFB2a(1) <---------TOE2(3)   aacgaaatactaagttacgtctaaccatccaaagaggaacaatgtatgatctaaattaattgaaaattcgaagaatccaatcacctttttttaggatctt  15717800        ----------->GT1      ---------->DOF2 ---->GT1                                                                           <-----------GT1 >ARR11(3)                                                                  --------->TOE2(3) >ARR14(2)              ----------->GT1                                     --------->TOE1(3) -ARR11(3)          --------->ANAC46                ------->TEIL            <---------MYB59  -------- ---------ICU4      --------->ANAC58          ------->TEIL      --------->ICU4   --------->TOE2(3) -ARR14(2)          --------->ANAC58----------->HVH21           <---------YAB1   --------->TOE1(3)  -   aaaaattagaaagaaaaaaaacaagacagaaaaaactagtgaccgatggatgtgaatctctaagtcaagattagtaaacctaaacttaaccttctacgaa  15717900                                       ---------->DOF2                                   --------->AHL20(2)                             --------->LBD16      --------->YAB1         ------>NtERF2     <---------YAB1         --------->ANAC58          --------->ALFIN1                            ---   ==================================================================================================   <---------------AGL15    --------->ANAC46  ----------->TBP                                     ---   --------------->AGL15    --------->ANAC58--------->CCA1(2)              ------------>CBF<--------- ->ANAC46                 --------->SPL7   --------->ARR11(3)    ----------->GT1 *TSS    <-----------GT1 -------->GLK1(2)       <-----------HVH21  <---------ARR11(3) ----------->GT1   --------->AHL20(2)---   aaattctattataagttcccactaatcgtcccgccattttaaaaagatataaaaccgtggggagaagtagaaataaaaacaataaaacaattaacaaaac  15718000          --------->DAG2         ---------->DOF2      <----------ID1    --------->MYB52(1) ------>ANAC58                <---------MYB52(1) ======MADS_MADS           ---------->ID1                                                  <-------TEIL ------>ANAC58            <-----------GT1                                                 --------->GLK1(2) ------AGL15   --------->ANAC58                                                      ---------->DOF2< -------->GT1  --------->ANAC58                       --------->TOE2(3)      ----------->GT1      <--   aagaaaaaacgaaaagcatgcaattgtttttcgttttttgttgaaacaaaaaacaaacttaacttcaccaaaaaaactacagaaaaaaaaagattcagtt  15718100                                                                             <---------YAB1                                                                           --------->AHL20(2)                                                                           --------->YAB1                                                                          <---------YAB1             <---------ALFIN1                                    <---------ICU4                     -         ---------->ID1                 <---------YAB1  <----------DOF2   --------->ICU4           --     <----------DOF2                    <---------AHL20(2)       --------->YAB1         <------ZmHOX2a(1) ----------DOF2                        --------->AHL20(2)       --------->ICU4---------->DOF2     --- ----------------------ANAC81 --------->ALFIN1    --------->YAB1<---------ATHB12<---------TOE2(3)<---   tccttttctttgtctccacttcttatataagagttgggcatttttattacaaacataacttttgaaatcatggctaattataaaggaagaggaaatgtta  15718200  --------->ANAC55(2)  --------->ANAC46                        <---------ANAC46  <---------ANAC55(2)                     <---------ANAC58                              --------->ARR14(2) <---------LBD16               --------->YAB1                                           <---------ARR14(2) -------->CCA1(2)           <---------bZIP60(1)              --------->YAB1            ------>MYB46(1) ------->ARR11(1)           --------->bZIP60(1)<-----------HVH21                  <-----------GT1 ------>YAB1     <---------ANAC58         <---------ANAC58<----------DOF2      <----------DOF2 ------YAB1      <---------ANAC58    <---------ICU4  --------->YAB1    ---------->DOF2 ------>MYB83   tgatacggagcatgttattgggtctctatggcatcataaacattgtgtgtgtcaatggtactttcataaactacaaagatgctttaaccaaatccctcat  15718300                                                                     <---------ETT(2)                   --------->AtLEC2              --------->AtLEC2   <---------HSFB2a(2)                   --------->ANAC58            <---------AtLEC2 --------->ZAT14                   --------->ANAC58            <---------ANAC46 --------->At4g35610                <------ZmHOX2a(2)    -------->HAHB4             <---------At4g35610                ========================HOX2a_HOX2a      ----------->HVH21               --------->ARR11(3)    --------->YAB1    <---------At4g35610                         <-               <---------ARR11(3)   <---------YAB1     ----------->GT1                             <-           ---------->DOF2       ------>ZmHOX2a(1)     --------->At4g35610                         --   cttcttggaggctcaaagatcaggcaaactccctcctaataatagggttccatggagaggtgactctgctctcgacgatggcaaactcgtaaatgtaagt  15718400                                                                                               ------                                                     --------->ARR11(3)          --------->ZAT18-----                                                 ---------->DOF2    <---------ANAC55(2)      <-------                         --------->YAB1   ----------->GT1           <---------YAB1        --------->HSFB2a(2) --------TOE1(3) <---------YAB1          <---------TOE2(3)       --------->ICU4  <---------ZAT18<---- --------TOE2(3) --------->ICU4          <---------TOE1(3)    --------->ICU4 <---------AtMYB61<------ ------->MYB59  <---------TOE2(3)  <---------GLK1(2) <---------ARR11(3)------->TEIL       <---------HSFB2a(2)   ttaggttatattacaaataatgtttattcataaatcagattttaaggttacaaaagataatgagataattatgtatgtataggtggacttgtctggaggg  15718500  Previous    Next  AGI:  At3g43860.1    Description:  ATGH9A4 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A4); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 16 precursor [Arabidopsis Thaliana] (GB:Q8VYG3;GB:Q9LZG2); similar to ATGH9B13 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B13), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT4G02290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82881.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43895.1); contains InterPro domain Six-hairpin glycosidase-like; (InterPro:IPR008928); contains InterPro domain Six-hairpin glycosidase; (InterPro:IPR012341); contains InterPro domain Range:  from: 15717981    to: 15720776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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