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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                         --------->ZAT6
                   ----------->RAV1(1)                                 --------->YAB1
                  ------->GAMYB                                        -------->HAHB4
                -------->P                                            <---------YAB1
                --------->ANAC58             --------->TOE2(3)      <---------ICU4
                --------->ANAC58             --------->TOE1(3)      --------->YAB1
                --------->ANAC46         --------->REM1(1)         <---------YAB1        <---------YAB1
----YAB1 <---------YAB1                ------>ZmHOX2a(1)           --------->ICU4     <---------YAB1
-->KAN4(2)    --------->MYB46(3)<---------GLK1(2)                --------->YAB1     --------->YAB1
 
cttggtcttgttatcaaacaacccacatagctcaagaatttcctacaaccttacaattcaaaatcagataataataatactatgcaatcttcattataca  15686700
                                                   <------ZmHOX2a(1)
                                                 --------->ANAC55(2)
                                                 <---------TOE2(3)
                                                <XXXXXXXXXXXXXXXXXXXXXMIR864-3P
                                            --------->ANAC58    --------->ATHB12
                  --------->At5g28300       --------->ANAC58    --------->ATHB51       --------->O2
                 ----------->GT1        --------->ANAC58       --------->ICU4          --------->TGA1a
       --------->YAB1                   --------->ANAC58       <---------YAB1          =============
      <---------YAB1              ---------->DOF2<---------TOE1(3)                ------>ZmHOX2a(1)
 
tctaaaattttcataacaaggggtaaaacataaaactaaaagcactcacgttaaggaattgttgacattattgagtcaaataatcctccaacgtctcttc  15686800
                                   --------->AHL20(2)
                                <--------HAHB4
                                <---------ICU4
                                -------->ATHB1
                                --------->ATHB51
                               --------->ICU4
                       ---------->DOF2
                     --------->LBD16
                    --------->ANAC58
                    --------->ANAC46                                                    <---------YAB1
                    --------->ANAC58<---------AHL20(2)                                  --------->AHL20(2)
                 ------>NtERF2 <---------ATHB51                               <---------YAB1 -------
                --------->DEAR3(1)<---------YAB1                             <---------AHL20(2)
                <---------ALFIN1--------->YAB1                --------->DAG2 --------->AHL20(2)  xxx
             --------->ANAC46  <---------YAB1                ---------->DOF2--------->AHL20(2) XXXXX
==================================bZIP_DOF         <-----------GT1----------->GT1       <---------AHL20(2)
 
gttctcttccaattcatcgccacccgtaaagacaattattatatagttagtgatttactaatccaaaagttgttaaaaattaaaatagaatataaatgaa  15686900
                                                          <---------AHL20(2)
                                                          <---------ICU4
                                                          -------->HAHB4
                                                       <---------ICU4
                                                       --------->ATHB51
                                                       <--------HAHB4
                                                       -------->HAHB4
                                                       <--------ATHB1
                                                       --------->YAB1
                                                      --------->AHL20(2)
                                                      --------->ICU4
                                                      <---------ATHB51
                    --------->AHL20(2)                <---------YAB1                          <-----
                   --------->AHL20(2)            --------->YAB1                              <------
               --------->AHL20(2)                --------->TOE2(3)                           <------
            <------ZmHOX2a(1)                 --------->KAN4(2)                              <------
            ----------->GT1                  <---------HSFB2a(1)      --------->ICU4         -------
           ----------->GT1           <---------HSFB2a(2) --------->ICU4   <---------AHL20(2)--------
-->YAB1 ---------->DOF2     --------->DAG2   --------->HSFB2a(1) ----------->GT1            --------
xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    --------->HSFB2a(2) <---------YAB1   --------->AHL20(2)<-------
XXXXXXXXXXXXXXX>MIR161.1  ---------->DOF2  <------ZmHOX2a(1)   ---------->DOF2    <---------YAB1
 
aatgactacatgaaaggataaaataaaaaaaaaggtagttttggaaggacattcttaataattattcaaagtaaaaattaaaaatacgataatgtgtcgt  15687000
                                                                                      --------->YAB1
                                                                                   <---------ICU4
                                                                                   --------->YAB1
                                                                                <---------ICU4
                                                                                --------->YAB1
                                                                               --------->ICU4
                                                                               <---------YAB1
                          ----------->GT1                                    <---------ICU4
----SPL7              ---------->DOF2                                        --------->YAB1
---ANAC58           --------->AHL20(2)                                    --------->YAB1 --------->YAB1
---ANAC58 <---------AHL20(2)    --------->YAB1--------->AHL20(2)         <---------AHL20(2)
---ANAC46--------->AHL20(2)--------->ZAT18----------->GT1           --------->At5g28300  --------->TOE2(3)
---->GT1 <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       ----------->GT1--------->ICU4
------->AtSPL3      <---------AHL20(2)  ----------->GT1       --------->DAG2<---------YAB1     -----
------->AtSPL8  <---------AHL20(2)  ---------->DOF2 <---------YAB1----------->GT1 <---------YAB1
--------AtSPL8  --------->AHL20(2) --------->AHL20(2)        ---------->DOF2--------->ICU4     <----
 
acaaaatagaaatttttttttaattaaaagtgcaaaaataaaagagagaaaaaatatgaaaacaaaaagagggtaaataataataataataatcttattt  15687100
                                                                                             <------
                                                                                             -------
                                                                                             <------
                                                                                           ---------
                                                                                         <----------
                                                                                     <-----------TBP
                                                                                     --------->AHL20(2)
                                                                                     <---------AHL20(2)
                                                                                   <---------AHL20(2)
                                                                                   --------->AHL20(2)
                                     ------------>CBF                            --------->AHL20(2)
                                 ------>MYB46(1)                                 <-----------TBP
                                 ------>MYB83                           <---------MYB59  <---------AHL20(2)
                                 --------->MYB52(1)                    --------->ANAC58<---------AHL20(2)
                               <---------MYB111(1)                     --------->ANAC55(2) <--------
                         <---------------AtSPL3                        --------->ANAC58<-----------TBP
                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               --------->ANAC55(1) <--------
                 <---------TOE2(3)*TSS                                 <---------ANAC55(2) <--------
            --------->YAB1     <---------MYB111(2)                     --------->ANAC46--------->AHL20(2)
            <--------HAHB4     <---------MYB46(2)                <------------CBF<---------AHL20(2)
           <---------YAB1--------------->AtSPL8           <---------AtLEC2     <-----------TBP
---->AHL20(2)   <-----------GT1<---------MYB59       <---------ICU4   ------->TEIL <-----------TBP
-----AHL20(2) <---------YAB1 ------->TEIL           --------->ICU4<---------------AtSPL3 --------->AHL20(2)
 
tattctatatttctattattaacgagacaatgtacctaactacaatgtctaactaatttttacatggacattgtacgtaactatatatatatatatatat  15687200
---AHL20(2)
-->AHL20(2)    <---------ANAC58
-----TBP------->GAMYB
>AHL20(2)      <---------ANAC58        --------->GLK1(2)                                        ----
-TBP --------->MYB52(1) <------------CBF                                           ------>ZmHOX2a(1)
-AHL20(2)  <------------CBF        --------->YAB1          <------ZmHOX2a(1)   <---------ZAT18<-----
-------AGL15   <---------ANAC46----------->GT1    <---------ARR14(2)      <---------ZAT14     <-----
---TBP--------->At4g35610   ----------->TGA1      --------->ARR14(2) ----------->HVH21     <--------
 
atagaaaacaactgaattgcgagaaaacattgtgacgaaaataatctttcgcaaatttgctaggaatttgctatgaccgtagtgtccttcgcaaaatcct  15687300
                        ------->TEIL
                     --------->ANAC58
     <---------ANAC58--------->ANAC55(1)
     <---------ANAC58<<<<<<<<<<AtMYC2
     <---------ANAC46--------->ANAC58
----->AtLEC2         --------->ANAC55(2)                                                          <-
----ANAC58           <---------ANAC55(2)            <----------DOF2                           ------
----ANAC58           ----------->GT1               <---------ANAC58                       <---------TOE2(3)
-ARR11(3)          <---------ALFIN1                <---------ANAC58                     <---------AHL20(2)
 
tgcaatttgcgagtacttagcgacacgtatatttctctagcaaaatttgcgatggctttactacttgctgatgaattagatgggcatgtttttaatgaat  15687400
                                                         --------->ANAC58
                                                         --------->ANAC58
                                                     ------>ZmHOX2a(2)        --------->YAB1
                                                   <---------ARR11(3)        <-------TEIL
                                              --------->AHL20(1)         <---------ARR14(2)
----------GT1                  <---------GLK1(1)   --------->ARR11(3)    --------->ARR14(2)
->TEIL                  --------->ATHB12     --------->AHL20(2)    <---------TOE2(3)
 
ataacaacttatttgataagtgagaattcattgtaaatccctagcaaaatatatgatctcgagcaagtctaaggcaaatattcatagcacttccctagca  15687500
               --------->AHL20(2)
           <---------ANAC46
     --------->AHL20(2)
     <---------AHL20(2)                                                --------->ARR11(3)
     --------->ATHB12      --------->TOE1(2)                           --------->GLK1(2)
     --------->ATHB51      --------->TOE2(2)                           <---------ARR11(3)
    <---------AHL20(2)    --------->ANAC58                          --------->AHL20(2)
    <---------AHL20(1)    --------->ANAC58                   --------->ANAC46                     --
    --------->AHL20(2)    --------->ANAC46  --------->YAB1<-------TEIL--------->RVE1(1)       ------
 
aaaacaaattatttgcctataaatatcaaacgtaagaaaaccatacatcataactcaaacatacacaaaaaaaaaatctacttacaaaaaaaaacagttt  15687600
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AGI:  At3g43826.1   
Description:  pseudogene, hypothetical protein
Range:  from: 15686380    to: 15687135    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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