Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <---------YAB1                                                                   <---------YAB1                                                            <---------HSFB2a(2)                                                            --------->HSFB2a(2)                                                           ------>ZmHOX2a(2)       --------->AHL20(2)                                                          <------ZmHOX2a(2)        <---------AHL20(2)                                                         --------->ARR11(3)     ------>MYB46(1)                                                         --------->ARR14(2)     ------>MYB83                                                         <---------ARR14(2)   --------->TOE2(3)     <       ----------->GT1                  <-----------GT1  <---------ARR11(3)   <---------MYB59     <--    --------->YAB1               >>>>>>>>>>>>>>>>>LFY   <------ZmHOX2a(1)  <-----------GT1  ---------   tcagaatcatagtaaatcacagagaaacaactagattccaatgtacgattccaatgtaggatctagaatatgatgaataacctaattaaacaagattcca  15677000                                                                     --------->ANAC58                                                                     --------->ANAC58                                                            ------>ZmHOX2a(1)                                                          <---------HSFC1(2)                                                          --------->HSFC1(2)                                                        <---------ARR14(2)                                                        <---------GLK1(2)                 --------->YAB1                         <---------ARR11(3)                 <---------ICU4          --------->GLK1(2)------>ZmHOX2a(2)        --------->TOE2(3)               <---------GLK1(2)<------ZmHOX2a(2)      <-----------ARR10   ---------->TaMYB80            --------->ARR14(2)      <---------ARR11(3)  <---------KAN4(2)             --------->ARR11(3)        ------->GAMYB ----------ID1  --------->ICU4   --------->MYB52(1)  <---------HSFB2a(2)          --------->TOE1(3) -------ICU4    <---------ATHB12 ---------->DOF2     --------->HSFB2a(2)          --------->TOE2(3) >GLK1(2)--------------------->WRI1   ----------->ARR10 --------->AGP1          -------->P   taactacaaatcttagtaatcatcaacgaatatactaaaggagattctacatattctagatccttctatagaagcaaaaatcaaccctaaacactctgga  15677100                                                                          --------->CCA1(2)                                                                   --------->ZAT14                                                                   --------->ZAT18    --------->LBD16                               ------>ZmHOX2a(2)           --------->ANAC58          --------->DEAR3(1)                              <------ZmHOX2a(2)            --------->ANAC46      <------ZmHOX2a(2)                             <---------ARR11(3)            --------->ANAC58     <-----------HVH21                             --------->ARR11(3)          --------->MYB52(1)<-------TEIL      --------                    --------->YAB1           <---------ANAC55(2)   <---------ZAT14 <---------At5g28300   gatgtgagcaagactgaacgaatcaaaacgagatcgttcttcaaatcacatgaaacaataaacgaaatgtgcagagattcacgatcaccgcgaagaaatc  15677200                                   >>>>>>>>>TBF1                         ------>ZmHOX2a(2)                        --------->CCA1(2)                       <---------ARR11(3)                       --------->ARR14(2)                       <---------ARR14(2)         >>>>>>>>>TBF1                                  <---                       --------->ARR11(3)      >>>>>>>>>TBF1                                     <---                       --------->AGP1 >>>>>>>>>TBF1  >>>>>>>>>TBF1                               <---                       <---------AGP1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  <--------                      <---------GLK1(1)     >>>>>>>>>TBF1                                   ---------        <----------ID1--------->GLK1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->ARR14(2)      --------->MYB52(1)<------ZmHOX2a(2)>>>>>>>>>TBF1                           <---------ARR14(2) ->GLK1(1)       ---------->DOF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <----------DOF2 ---------->DOF2   taaaaaaaaaacgacaagagaaagagatctgagagaagaagaagaagaagaagaagaagaagagaccatctccgtctttgtcgaataggctaaaagcttc  15677300                       <---------MYB52(1)                      <-----------HVH21            ------>ZmHOX2a(2)           --------->CCA1(2)           <------ZmHOX2a(2)          <---------ARR11(3)          --------->ARR11(3)      ------>NtERF2          --------->AGP1          --------->LBD16          <---------AGP1  --------->At4g35610          --------->ARR14(2)     --------->ANAC58          <---------ARR14(2)     --------->ANAC58                <---------HSFB2a(2)         <---------GLK1(1)<---------At4g35610                    --------->HSFB2a(2)               --         --------->GLK1(1)<---------ZAT2                       --------->HSFB2a(2)                ---        ----------->ARR10--------->MYB52(2)    ---------->ID1  <---------HSFB2a(2)                <--    <---------LBD16  <---------MYB46(3)   <------------------------ANAC81                        <--- ------ANAC58    <---------WRKY12--------->ANAC46        <---------ARR14(2)               <---------ANAC58 ------ANAC58    <---------WRKY38(1)    <---------AHL20(2)--------->GLK1(1)               <---------ANAC58 ------ANAC46  <-----------HVH21------>ZmHOX2a(2)        --------->ARR14(2)             <-----------GT1 -HSFC1(2)--------->ARR14(3)  --------->ARR14(2)         <---------GLK1(2)              <---------AHL20(2) >HSFC1(2)<---------ARR14(3)  <---------ARR14(2)     <---------LBD16                <---------RVE1(1)   cttgaactcggagatctggtcatcggttagctgatccgccattttttttgtcttcttcggattttctcgagaaaatttttgctgtgatattttcttgttt  15677400                                                             --------->ZAT2                                                             --------->At4g35610                                                            --------->ANAC58                                                            --------->ANAC46         ---------->DOF2                                    --------->ANAC58        <---------REM1(1)   --------->KAN4(2)        <------ZmHOX2a(2)   ---------->DOF2         <---------KAN4(1)        --------->ARR11(3)         <---------RVE1(1) ------->LBD16 <---------ANAC58              <---------AHL20(2)    ----------->GT1         <--------- ------>HSFB2a(2)          --------->HSFB2a(1) *TSS <---------ARR11(3)       ----------->GT1<-------- -------HSFB2a(2)----------->HVH21          --------->AHL20(2)   <-----------RAV1(2)    <------------CBF ------LBD16   <---------ANAC58        <----------DOF2------>ZmHOX2a(2)     <---------TOE2(3)      <-   ctggagaaagttgaagcgcgtgagagtgaatgttccttctcctttataaaatgagatctcaccagctacaggtaaaatgaggtatttttgaattgacgat  15677500                                                       ==============================================                                                       --------------->AGL15                                                       <---------------AGL15                                                      <-----------------AGL2                        --------->AHL20(2)          --------->GLK1(2) --GT1 ------>ZmHOX2a(1)<---------AHL20(2)     <---------TOE2(3) -TOE2(3)            <----------DOF2     <---------AHL20(2)                     <---------TOE1(3) ----------GT1 <----------DOF2           --------->AHL20(2)                     <---------TOE2(3)  <-   tttgccctcctaaacgtctttctcttttaatttctcagaccaaaaaattaagaaattctagttttgggagaaatttgttttttaggtttgcaacttagtt  15677600        <---------TOE2(3)                                                                     -------  --------------->AGL15                                                                   <---------TOE1(3)  <---------------AGL15                            <---------At4g35610                    <---------TOE2(3) <-----------------AGL1                       <----------DOF2                          <---------YAB1 <-----------------AGL3               <------ZmHOX2a(2)                             <---------YAB1 <-----------------AGL2              <---------ARR11(3)                           -------->ATHB1 =================MADS_MADS          --------->ARR11(3)                           --------->ATHB51 ----------GT1         <---------MYB111(1)  ------->TEIL                         <---------YAB1   tttactattttaggctaatctactaactacttatgtccagatcatgaactttctgctaatagttttgaatttgatatttttgtattattgttatggtatc  15677700                     ----------->RAV1(2)             <---------ANAC46                <---------REM1(1)              --------->ATHB12         --------->ARR11(3)            --------->GLK1(1) --------->ANAC58         <---------AHL20(1)            <---------GLK1(1) --------->ANAC58         --------->AHL20(1) <---------YAB1XXXXXXXXXXXXXXXXXXXX>MIR849<---------AHL20(2)   <---------YAB1  <-----------GT1   --------->YAB1  <---------REM1(1)   <-------TEIL -->ARR11(3)   <---------TOE2(3) >>>>>>>>>EIN3<---------ATHB12      --------->AHL20(2)          <----   ttggtatgatatatattgatgtaacctgatattatacattgatatccaaacattggtgtaggcaatttgataaaattcattttctatttgctaagtttat  15677800                                                                                       <-----------RAV1(1)                                                                                   <xxxxxxxxxxxxxxxxx                                                                                  ------->TEIL                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <-----------GT1    --------              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       xxxxxxxxxxxxxxxx>smallRNA(s)  ----------->GT1      --------->AHL20(2)                               xxxxxxxxxxxxxxxx>smallRNA(s) <---------TOE2(3)  ------>MYB46(1)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------TOE1(3)  ------>MYB83      <---------TOE2(3)           <-----------GT1 --------->PCF2 <xxx -----YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   tttagggtaatattagataaccaaataaaacatacaaattaagaaactagtagagagaaagttttttgttacaaaataaccatggacccatgttgtcgga  15677900  Previous    Next  AGI:  At3g43810.1    Description:  CAM7 (CALMODULIN 7); calcium ion binding. Identical to Calmodulin-7 (CAM7) [Arabidopsis Thaliana] (GB:P59220); similar to CAM3 (CALMODULIN 3), calcium ion binding [Arabidopsis thaliana] (TAIR:AT3G56800.1); similar to CAM5 (CALMODULIN 5), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.3); similar to CAM5 (CALMODULIN 5), calcium ion binding [Arabidopsis thaliana] (TAIR:AT2G27030.1); similar to calmodulin 4 [Daucus carota] (GB:AAQ63461.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 15675358    to: 15677447    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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