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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                            --------->LBD16
                                                                         <------ZmHOX2a(2)
      <---------WOX13(1)                                                --------->ARR14(2)         <
    --------->ATHB12                                  --------->ALFIN1  <---------ARR14(2)         -
-------->ARR11(3)                              <---------YAB1          =============================HOX2a_HOX2a
---------ARR11(3)             <-------TEIL  <---------YAB1             <------ZmHOX2a(1)          <-
--------GT1       <---------MYB46(3)  --------->MYB46(3)     <---------RVE1(1)     ----------->GT1--
-->YAB1 <-----------GT1<---------AtLEC2 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ---------->DOF2     --
-AHL20(2)         <-----------RAV1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------>ZmHOX2a(2)  <------ZmHOX2a(2)
 
aacatcttgatttactcgagattgttgcattgattcattcaaccaatttgattataggtgtgtgatattttgaaggatccgaaaaacagaaaatagatca  15612500
                                                         ------->TEIL
                                                     <---------------AtSPL3
                                                     --------------->AtSPL8
                                                     <---------------AtSPL8
             <---------LBD16                      --------->AHL20(2)
            --------->MYB52(1)                  ------>ZmHOX2a(1)
       --------->AHL20(2)                      <---------------AGL15
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------------->AGL15
---------ARR14(2)                              --------->TOE2(3)
-------->ARR14(2)                              --------->TOE1(3)                         <----------DOF2
--------GLK1(1)        --------->AHL20(2)--------->AHL20(2)                            --------->At4g35610
------->RVE1(1)        --------->YAB1    <---------AHL20(2)                            <---------At4g35610
------->GLK1(1)--------->LBD16          --------->AHL20(2)                    --------->CCA1(2) <---
 
aatatccgaattaaaaaccgggtcaataaaaaaaacaatccgattaaattccttaaaatgtacttaaaaattgttaagtagatagaagggagctttcaat  15612600
                                                                              <-----------GT1
                                                                         <---------AHL20(2)
                                               --------->ANAC58         <---------AHL20(2)
             <---------TOE2(3)                 <---------ANAC55(2)      --------->AHL20(2)
             <---------YAB1                    --------->ANAC58     --------->AHL20(2)
         <----------DOF2                       --------->ANAC55(2)  <---------AHL20(2)       <------
         <---------DAG2                --------->ANAC46    --------->AtMYB61--------->AHL20(2)<-----
------ARR11(3)             --------->ANAC46    ----------->GT1----------->RAV1(1)            -------
 
ttcttctatccactttaacattgttcttctacacaaatgtctactcaagaacgtaacaaaaaccacaacaaaaaattaaataaacattttcatcaagatc  15612700
                                                       ------------>CBF
                                                       <---------ATHB12
                                                      ------>MYB46(1)
                                                      ------>MYB83
                                                    ------->GAMYB
                                                    --------->AtMYB61
                                                    <---------MYB59
         --------->LBD16                          --------->ANAC58                            ------
       <---------LBD16               <---------YAB1--------->MYB46(3)              ------>ZmHOX2a(1)
      --------->MYB52(1)    <---------LBD16       --------->ANAC58                --------->TOE1(3)
---ARR11(3)            --------->TOE1(3)      --------->ANAC46                    --------->TOE2(3)-
-ZmHOX2a(2)            --------->TOE2(3)      --------->ANAC58        <------------CBF       -------
-->ARR11(3)     <---------ZAT6--------->LBD16 --------->ANAC58       --------->ATHB12   ------------
 
atcaacacaaaccggattagagataaccttaaccgggtttattttagactcgcaaccaaacaatctctctacttattggggttttccttaagacaatgac  15612800
                                                                          --------->GLK1(2)
                      ------------>CBF                         --------->LBD16
                     --------->TOE2(3)                         --------------->AGL15
                    --------->YAB1                    *TSS     ----------------->AGL1
                    <---------ICU4             --------------------->WRI1--------->GLK1(1)
                   <---------YAB1        <---------ARR14(2)    <---------------AGL15
 <-----------GT1 <---------ICU4          --------->ARR14(2)   ----------------->AGL2
------>CBF       --------->YAB1         <------------------------ANAC81  <---------GLK1(1)
-------->YAB1   <---------ATHB12        <---------MYB52(1)    <-----------------AG
-->YAB1       --------->WOX13(1)        <---------CCA1(2)<---------GLK1(1)<---------ARR14(2)
>CBF        ------------>CBF<-----------GT1    <----------DOF2<-----------------AGL1     <---------GLK1(1)
 
aattataccctcttcatcaatcatcatcaattttcgtcttcccgtttcttctttgtttgaatttcccccaaattgggaatccaaaaccctagaaatctcc  15612900
                                                              --------->ANAC58
                                                              --------->ANAC58
                                                            ---------->DOF2
                                                        <------ZmHOX2a(2)
                                                       --------->ARR14(2)
                                                       <---------ARR14(2)
                                                      <---------ARR14(1)
                                                   --------->At4g35610               ------>MYB83  -
                               ---------->DOF2     <---------At4g35610             <---------MYB59--
               ----------->RAV1(2)                --------->MYB52(1)          <---------HSFB2a(2) --
               --------->At4g35610              --------->MYB46(3)            --------->HSFB2a(2) --
               <---------At4g35610            --------->ARR14(2)    <---------ALFIN1 ------>MYB46(1)
    --------->GLK1(1)       <-----------HVH21 <---------ARR14(2)    ----------->RAV1(1)     --------
 
atgagagaattcttctccatctgaatccaaatgtcaaagctaatgaccagaaccagcggatcatcaagccccaacacgattccagaccaaatcgaatcac  15613000
                       --------->ANAC58
                       <----------ID1
                       --------->ANAC58
                    --------->DEAR3(1)
                   <-----------RAV1(2)
                 <---------ANAC46            <---------ANAC58
              ----------->HVH21              <---------ANAC58         ---------->DOF2
         --------->ARR14(2)         --------->ZAT18                   --------->MYB52(1)
         <---------ARR11(3)        ------>ZmHOX2a(2)               <---------At4g35610
--------->DOF2----------->TGA1    <------ZmHOX2a(2)        <-------TEIL
---->MYB46(1)<-----------HVH21   <---------ARR14(2)       --------->CCA1(2)
------>P <---------ARR14(2)      <-----------ARR10       <---------ARR14(2)      <---------ANAC46
---->MYB83 ------>ZmHOX2a(2)     --------->ARR14(2)      --------->ARR14(2)      <---------REM1(1)
->MYB46(3)<------ZmHOX2a(2) --------->MYB52(1)    --------->CCA1(2)--------->At4g35610----------->GT1
 
caacaagctcaagatcggtgacgcagacgacaaacggatcgcaccaattcgtgatacaaggatacagtttagctaaaggaattggtgtagggaaacacat  15613100
                                                    --------->RAP2.6(3)
                                                   --------->MYB52(1)
                                                  ----------->HVH21                <---------ANAC58
                                                  ----------->TGA1                 <---------ANAC58
                                                ----------->RAV1(2)                <---------ANAC55(2)
             <---------LBD16        <---------ARR14(2)                             <---------ANAC55(1)
      <---------ICU4                <---------ARR11(3)                ----------------------->TaNAC69(2)
     --------->ICU4       <---------YAB1      -------->P         --------->LBD16   --------->ANAC55(2)
     <---------YAB1<------ZmHOX2a(1)--------->ARR14(2) --------->At5g28300       <-----------GT1
----------->GT1--------->LBD16      --------->ARR11(3)----------->GT1<------ZmHOX2a(1)
 
agcaagtgataatttctccgtaggaggttatcaatggactatcttcgtctaccctgacggtaaaaatccagaggataactcttcttacgtctctgtgttc  15613200
                                                                               ----------->GT1
                                                                              <---------TOE1(3)
                                                                              <---------TOE2(3)
                                                                          --------->YAB1
                                 <---------DAG2                         --------->ANAC58
                             --------->ZAT18                      --------->DAG2
               <---------ZAT14   <----------DOF2                 ---------->DOF2  <-------TEIL
             <---------------AtSPL3     <---------At4g35610 XXXXXXXXXXXXXXXXXXXX>MIR3440B-3P   <----
      <---------ANAC58       <---------ZAT18           <---------------AGL15  --------->DAG2 <------
      <---------ANAC58    ---------->DOF2 <----------DOF2---------->DOF2--------->ANAC58     -------
 
atcgttttggctagtgaatgtactgaagttagagcgctttttgagctttctcttgttgatcaaagtggtaaagggaagcataaggttcatagccatttta  15613300
         <---------AtMYB61                                                               <---------AHL20(2)
    --------->ANAC55(2)                                                 <---------ARR14(2)
 <---------ZAT18                                      <---------ANAC58  <---------ARR11(3)
--------->DOF5.7(2)             <-------TEIL          <---------ANAC58  --------->ARR11(3)
-------GT1        ------>ZmHOX2a(1)   <------ZmHOX2a(1)   ---------->DOF2                <---------YAB1
---AHL20(2)  <---------MYB46(3) --------->ZAT14       <---------ANAC46  --------->ARR14(2)
-->AHL20(2) <---------AtMYB61   <---------ZAT14 <---------SPL7  <----------DOF2    <---------ANAC46<
 
atcgttcacttgatggtggtccttatacgcttaagtacagaggaagtatgtggtatggcttgaaagtcttttcagtatcttcaatggcatatattattgt  15613400
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AGI:  At3g43700.1   
Description:  ATBPM6 (BTB-POZ AND MATH DOMAIN 6); protein binding. similar to ATBPM5 (BTB-POZ AND MATH DOMAIN 5), protein binding [Arabidopsis thaliana] (TAIR:AT5G21010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67414.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210); contains InterPro domain TRAF-type (InterPro:IPR013322); contains InterPro domain BTB/POZ; (InterPro:IPR013069)
Range:  from: 15612855    to: 15614875    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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