Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <------NtERF2                                                                      <---------DEAR3(2)                                                                      ------>NtERF2                                                                     <---------DEAR3(1)                                                                    --------->ATERF1(1)                                                                    --------->DDF1                                                                   <---------ATERF1(1)                                                                   <-----------HVH21                                                <---------WOX13(1)<---------TGA1a                                              --------->ATHB12    --------->TGA1a                  --                                     <---------At5g28300        <------ZmHOX2a(1)                  --             --------->MYB52(1)     <-----------GT1    <---------MYB46(3)                   <------ZmHOX2a(1) ----------->GT1             ----------->GT1 <---------YAB1--------->ATHB12          ------->TEIL  <-   actatgtaaaacaaataacagagagaacaagaagttatttaccatttctgattggatttgttgataggacgtcggccctgataaatggatgtgaggaccg  15009800                                                                                          <---------ARR14(2)                                                                                          --------->ARR11(1)                                                                                          --------->ARR11(3)                                                                                          --------->ARR14(2)                                                                                          <---------ARR11(3)                                                                                        --------->LBD16                                                                                       --------------                                                                                       <-------------                                                                                      <--------------                                                                                      <--------------                                                                                      ---------------                                                                                      <--------------                                                                                      ---------------                  <---------ANAC58                                                    <---------LBD16                  <---------ANAC58                                         --------->ANAC46               --------->TOE1(2)                                           --------->ANAC58        <-----------HVH21                                     <---------ARR14(2)      <-------------- --------------->AGL2                                         --------->ARR14(2)      --------------- --------------->AGL1            <-----------HVH21  <---------ANAC58       --------->ANAC58 ----------------AGL1  <---------ANAC46             <---------ANAC58       <---------ALFIN1--------->CCA1(2)   agcccattacggtcagacatgcgagccttggaatatgtcagactctttgcaattgcttcttcagtatcccagtatgcacacatcgtttcccagatatggg  15009900       ===============HOX2a_HOX2a       ------>ZmHOX2a(2)       =================================HOX2a_HOX2a    --------->YAB1   <---------ATHB12 ->AGL15                                         <---------ARR11(1) --AGL15                                         --------->ARR11(3) ---AGL2                                         <---------ARR11(3)                                 - ---AGL3                                        <---------CCA1(2)                         <---------ZAT14 -->AGL2                                      --------->YAB1             <---------ARR11(3)         = ---AG<-----------------AGL1                  <---------ICU4             --------->ARR11(3)         = -->AGL1        --------->ZAT18              <---------ATHB12           <---------CCA1(2) --------->ZAT14 ---AGL1        <---------ZAT18  ----------->HVH21               ----------->HVH21 <---------------AtSPL8 -->AGL3       <------ZmHOX2a(1) ------>ZmHOX2a(1)             <----------DOF2     <---------------AtSPL3   aatcaatgatccatttaggacactcttgactagtcctcacagtgctaatcatatctttcatccgtctttgacatatatcttcaaaatagtactgaactgt  15010000              ------>ZmHOX2a(2)             <------ZmHOX2a(2)            <---------ARR11(3)            --------->ARR14(2)                                         --------->At4g35610            <---------ARR14(2)                                     --------->MYB52(1)           <------ZmHOX2a(1)   --------->HSFB2a(2)            <---------YAB1       ---------->DOF2<---------ANAC46                       --------->ARR11(3) ----->ZmHOX2a(1)  <---------ATHB12            --------->ICU4<---------ARR11(3) ====================HOX2a_HOX2a        ---------->DOF2    ----------->GT1       <---------AHL20(2) ===================HOX2a_HOX2a<---------HSFB2a(2)<---------YAB1   <-----------GT1             ------   tcctgtaatcaaaggatcccaatggtgtattttctacaaatacaaagacatgatgttagtgaagataattaacagctaaacatttaagtgaatgcaagag  15010100                                          <-----------------------TaNAC69(2)                                        <------ZmHOX2a(2)                             <----------DOF2          ----------->HVH21                          --------->ARR11(3)        <---------ANAC55(2)                          --------->GLK1(2)<---------ANAC46                     ---------->DOF2   --------->ARR14(2)                  <---------HSFB2a(2)  <---------ARR14(2) ----->GT1--------->LBD16 <---------ARR11(3)--------->LBD16 --------->At4g35610   aaaaaactataccgcaaactcgagaaagtatctttctcgtcgatcccgtggaacacatgaccagctatagaagacaccatcaaatttgtttgtccatact  15010200                       *TSS                                                                     -----                  --------->TOE2(3)                  ----------->HVH21           --------->ANAC46                -------->P                --------->TOE1(2)                 <-------TEIL        <----                ------->TEIL <-----------HVH21---------->DOF2         <------ZmHOX2a(2)   <---------ALFIN1   ctagtaatctttcgaatcaacctcgaagatgtgtcacgagtaaacctgcaaagacatgacaagaatacacagatcaaatgcataagacactcacacattt  15010300                                                <---------ANAC58                                                <---------ANAC58                                            <---------WOX13(1)                                          --------->ATHB51                                          <---------ICU4              --------->ZAT14             --------->ATHB12              <---------ZAT14            <---------YAB1                         <------ZmHOX2a(2)         ------------>CBF                --------->ICU4                        <---------ARR11(3)       <------ZmHOX2a(2)               --------->YAB1                          --------->ARR11(3)      --------->ARR11(3)              <------ZmHOX2a(2)            --------->ANAC58           -------      <---------ARR11(3)             --------->ARR11(3)            --------->ANAC58<---------YAB1 ---->AHL20(2)--------->ZAT18        <---------ARR11(3)  --------->YAB1--------->ANAC58       ------- -----AHL20(2)<---------ZAT18   --------->TOE2(3)     --------->ANAC46 --------->ANAC58       -------   aaactagagatcacaatgcactaacacattaaaaccatagatcataattggcttacacatcataaccagacgcatgctagagatcacaatagactcacac  15010400                         --------->ZAT6                    --------->ANAC55(2)                    <---------ANAC55(2)                    --------->ANAC46                      --------->At4g35610   --------->ANAC46 --------->ANAC55(1)                   <---------At4g35610 -->ANAC46        --------->ZAT6                    <-----------GT1 -->ANAC58      <-----------GT1     --------->ZAT14<---------YAB1--------->ANAC46--------->ZAT6 -->ANAC58 <---------TOE2(3)    --------->ANAC46<---------YAB1   --------->bZIP60(2)            -----   aacttacacaactaagtttaacacttaacattacacaatacactcggactcttattactaagcagacacatcacaatacacttacactcttatcacttac  15010500             <---------ANAC55(2)             --------->ANAC55(1)       XXXXXXXXXXXXXXXXXXXX>MIR4240    <---------TOE2(3)                                                                     <----------   ---------->DOF2--------->ZAT6                                        --------->ANAC46 --------->bZIP60(2) <---------MYB52(2)      --------->ANAC46                       ------>MYB83             --------->ANAC46 ---->ANAC46 --------->ANAC55(2)--------->ANAC46                ------>MYB46(1)<xxxxxxxxxxxxxxxxxxxxx   acaactaaagtagacacttaacattacacattacacaatacactaacacacttacaaaactaaaccaaacacttacacaactaaactagacacttcacat  15010600                                                                                          <---------TOE2(3) -HVH21    --------->LBD16                               --------->ANAC46    <---------ICU4 xxsmallRNA(le3)            --------->ZAT6  --------->ANAC46 --------->ZAT14<---------ATHB12---------   ctaaactagataccgcaaactaatacacttacactaatacacttacacaatacacttacacaatacactcggactctaatcaatacattgttaagaaaga  15010700  Previous    Next  AGI:  At3g42930.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 1.0e-43 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 15008995    to: 15010223    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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