Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              ---------->DOF2                                                                       --------->TOE2(3)                                                                       <---------------AGL15                                                                       --------->TOE1(3)                                           <---------AHL20(2)          --------------->AGL15           --------->DAG2                  --------->AHL20(2)    <-----------GT1       --------->YAB1           --------->ANAC58             --------->AHL20(1)   ===============================HOX2a_HOX2a                <---------AHL20(2)   <------ZmHOX2a(1)            --------->ANAC58             --------->AHL20(2)    <XXXXXXXXXXXXXXXXX -->ANAC46---------->DOF2  ------>ZmHOX2a(2)                --------->AHL20(2)  <----------ID1    ---   aagtaggaatcaaaaagctctaaaattgatccaaacccaattgattttattacaaaaaccaattttattacaaccttaaaaagagacaaaacttggattc  11981700                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                           --------->CCA1(2)                          <---------ARR11(3)                          --------->AGP1                          <---------AGP1                          --------->ARR11(3)                                          --------->ARR14(2)                         --------->RVE1(1)                                            <---------GLK1(2)                <------ZmHOX2a(1)                                                     <---------ARR14(2)                ===================HOX2a_HOX2a                            -------->ZAP1   <----------      <----------ID1  ---------->DOF2                                   <---------WRKY18(1)--------->ATHB12 XXXMIR773B     ==================HOX2a_HOX2a               ------>ZmHOX2a(2)--------->LBD16 <------- ------>ANAC55(2)   --------->YAB1                      <---------YAB1 ----------->HVH21  <---------YAB1   aagtgattaagacaagtaggaatcaaaagatctaaaattgattcaaaaccaattgattttgatcgaaattggtttgacccagaaaatggattctgattga  11981800                                                                                            <------ZmHOX2a(1)                                                                                           <------MYB83                                                                                           ----------                                                                                  <---------GLK1(2)                                                             <---------MYB59      --------->ARR14(2)                                                           --------->ARR11(3)     <---------ARR14(2)                                                           <---------ARR11(3)     --------->ARR11(3)                                                       ---------->DOF2            <---------ARR11(3)          <-----------GT1                            --------->YAB1     ===========================HOX2a_HOX2a -----AGL15                                      ==============================HOX2a_HOX2a <------MYB46(1) --WOX13(1)       <---------YAB1                 <------ZmHOX2a(1)      ------>ZmHOX2a(2)<--------P   agaaatgaaatttgactgttttgattcagaacttacacgattagacaagtaggaatcaaaagacctaaaattgatcgaaacccagattttggtaggagaa  11981900     <------MYB83     <---------ANAC58     <------MYB46(1)                                        <---------ZAT14     <---------ANAC58                              <---------YAB1    <---------MYB46(3)                       --------->AHL20(2)                             ---------    --------->MYB111(1)                     <---------AHL20(1)                      <-----------GT1    --------->MYB55(2)                      <---------ARR11(3)                     <---------AHL20(2)    --------->MYB46(2)                      --------->ARR11(3)                 <---------RVE1(1)    --------->MYB111(2)                 <------ZmHOX2a(1)  --------->ALFIN1   <---------ARR11(3)    <---------AtMYB61                  ----------->GT1  --------->DAG2        --------->ARR11(3)    --------->MYB52(2)                --------->MYB59---------->DOF2          <---------GLK1(2) ->GT1                   <---------TOE2(3)  --------->AHL20(1)              ----------->ARR10   aatggtttggtgctagaatcagacaccaaggtagaagaattaggaaaatatttatgaaagagtggagagattagagagaagatttttaatcttctaaaga  11982000                                                                                        --------->ANAC58                                                                                        --------->ANAC58                                                                                        --------->ANAC46                                                                                       --------->SPL7                                                                                    <---------ANAC58                                                                              <---------YAB1     ----                        <---------At4g35610                                ----------------------->TaNAC69(2)                        --------->At4g35610                    ----------->HVH21    <---------ANAC58*TSS                --------->ARR11(3)                             ----------->TGA1    <---------------AtSPL3              --------->ICU4   ----------->GT1               <---------At4g35610   <---------------AtSPL8 ->DOF2 <------ZmHOX2a(1) <---------REM1(1)  <------NtERF2   --------->At4g35610   --------------->AtSPL8   agaaatttgaggagaaatgattttggagatgaagggaaattataggcctcacgattttggttttgctgacgatggaaattgtgattgtgtacgacactat  11982100                                                    <---------LBD16                                                 <---------ARR14(2)                                                 ------->TEIL                                                 --------->ARR14(2)                                                <---------CCA1(2)                                          <---------ANAC58                                 ----------                                          <---------ANAC46                               <-----------                                          <---------ANAC55(1)      <---------AHL20(2)  --------->AHL20(2)                                          --------->ANAC55(2)     --------->AHL20(2)   <---------AHL20(2)                                          <---------ANAC55(2)     <---------AHL20(2)   --------->AHL20(1)                                       <---------SPL7   ---------->DOF2               --------->AHL20(2)                          <------------CBF<---------ANAC58--------->DAG2              <---------AHL20(2)                         --------->ATHB12<-------TEIL--------->LBD16              --------->AHL20(2)    <XXXXXXXXXXXXXXXXXXXMIR866-3P    <---------------AtSPL3----------->GT1        <---------AHL20(2) ----->YAB1      <---------YAB1      <---------TOE2(3) <------ZmHOX2a(1)         --------->AHL20(2) <   aatcttttaaaaatggattttgtttgtttattggataatgaggtacgtgtgtatccaggaaaggtgaattaaatgagattagattaaattaaattgtcaa  11982200                                            <---------WOX13(1)                                          --------->ATHB12                                   --------->ALFIN1                           --------->ARR11(3)                                 --------->ARR14(2)                     <---------AHL20(2)  --------->ICU4                       <---------ARR14(2)                     --------->AHL20(2)  <---------YAB1                       <---------GLK1(2) <---------At5g28300--------->AHL20(2) <---------At4g35610                    --------->ARR11(3) ->GT1       --------->WRKY38(1)   <---------DEAR3(1)                      <---------TOE2(3)        < -CBF     <---------YAB1   <---------ARR11(3)                    --------->ANAC46        ----------->GT1 -----------GT1>>>>>>>>>WRKY6------>ZmHOX2a(2)              <-----------ARR10<------ZmHOX2a(1) <-----   atttactgtattatgttgactatttatttgatcttaggtggtgctgattggattttggagaaaatcgacgcagtgtttaggattttctgaattgtatata  11982300                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                           ----------->GT1          <-----------GT1      ---------->DOF2         <---------ICU4              <---------TOE2(3)    ----------->GT1   <---  <---------ANAC58            --------->YAB1           <---------AHL20(2)    <---------WOX13(1) -----  <---------ANAC58           --------->ICU4  <---------ARR11(3)           <---------AHL20(2)   <----- ---------YAB1  <---------AHL20(2)           --------->ARR11(3)         --------->ANAC55(2) --------- ----AHL20(2)  --------->AHL20(2)        ---------->DOF2---------->DOF2 <---------ANAC55(2) ---------   atatgcttgaaagtttataaaatagaagagaattatggtctcaaaaagatactatatataaaggtaaaaacattatgtaattggtttaactaaacatatg  11982400       <---------AHL20(2)       <---------AHL20(1)       --------->AHL20(2)  <---------AHL20(2)  --------->AHL20(2)                                     <-----------GT1  <---------AHL20(1)                                 --------->ATHB12 -------CCA1(1)                                     <---------YAB1 -------RVE1(1)                                     --------->ICU4 ----->ARR11(3)                                   <---------AtLEC2 <---------------AGL15 ------ARR11(3)                                   <---------ANAC58 --------------->AGL15           -- ---->YAB1                                   <-----------RAV1(1)  <-----------------AGL2       ------ ----YAB1                              <---------AHL20(2)--------->MYB52(1)              --------->TOE2(3) >TOE1(2)                              <-----------GT1 <---------WOX13(1)               ----------->GT1 >TOE2(2)                      ----------->GT1    <---------ANAC58<-----------------AGL3<---------ANAC55(2)   atattttattttattttgtatgttatgtagtattggtaaatttacttatgttgcatgattaacagttttctaattctggtttcttaaaaaacgtaaattg  11982500                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                               <---------CCA1(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                    <---------ANAC46                       --------->ATHB12                                                    --------->ANAC55(2)                   <---------AHL20(2)                                                    <---------ANAC55(2)    <---------AHL20(2)                                                    <---------ANAC58      --------->AHL20(2)   <-----        --------->AHL20(2)       --------->YAB1     <---------ANAC58      <---------AHL20(2)  -------  <----------ID1      <---------ANAC55(2)           ----------->GT1 ----------->GT1   <---------YAB1  ----------->GT1     --------->ANAC58         <---------------AtSPL3     --------->AHL20(1)  ------- -------->DOF2        --------->ANAC58         <---------------AtSPL8     <---------AHL20(1) <------- ----->GT1          --------->CCA1(2)   ----------->GT1      <---------ANAC46       --------->YAB1   taaaaggaaaaaatatagtttgatacgcgaacttataaaaactggttatttagtacgtgaatttcgtatattgtaatttaatataagtataattcattga  11982600  Previous    Next  AGI:  At3g30390.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT5G38820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49239.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 11979316    to: 11982100    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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