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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                           ----------->GT1
                                                                        <---------ARR14(2)
                                                                ------>ZmHOX2a(2)
                                             --------->YAB1    <------ZmHOX2a(2)
                                         <---------MYB52(1)    --------->CCA1(2)
                                    ------------>MYB.PH3(1)   <---------ARR14(2)                 ===
            ------>ZmHOX2a(2)  ------>ZmHOX2a(2)              --------->ARR14(2)      --------->ANAC58
          <---------ARR11(3)  <---------At4g35610             --------->ARR11(3)      --------->ANAC58
          --------->ARR11(3)  --------->At4g35610             <---------ARR11(3)      --------->ANAC46
       <------ZmHOX2a(2)     <---------AGP1 <---------YAB1    --------->AGP1 <---------MYB52(1)  ---
 <-----------GT1             <---------ARR14(2)               <-----------ARR10   --------->ARR11(3)
----------DOF2               --------->ARR14(2)    --------->TOE1(2)    --------->ARR14(2) <--------
 
cgattttccgatcgatcttacctctgattttggatctgaaaactgttatgaaaacttgggaacgagatctactcagaaccgttaagaactcgccaaactc  11787500
             --------->MYB52(1)
            --------->ARR14(2)
            <---------ARR14(2)
        <---------ANAC46
      --------->MYB52(1)
     ----------->HVH21
     ----------->TGA1
    xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
    <-----------HVH21
   <---------TGA1a
   <---------ANAC58
   <---------bZIP60(2)
   --------->TGA1a
   --------->O2
   --------->ANAC55(2)
   <---------ANAC58             <---------ALFIN1
   <---------O2    <------ZmHOX2a(2)                                         <---------ATHB51
==========================HOX2a_HOX2a                           --------->ANAC46
--->ZmHOX2a(1)   <xxxxxxxxxxxxxxxxsmallRNA(i)      <----------DOF2           <---------ATHB12------>ZmHOX2a(2)
-ALFIN1<-----------------------TaNAC69(2)   <-----------GT1XXXXXXXXXXXXXXXXXXXX>MIR403   <---------YAB1
 
cttcggacgtgacgggaaacggatcaccaattccaccacttgaattgtttccttctttcacatattcacacaaaaacccaatagttgaagttatgatcca  11787600
                                                                        --------->LBD16            -
                                                                      <---------LBD16            ---
                                                                    <---------ARR14(2)          ----
                                                                    --------->GLK1(2)          -----
                                                                ------>MYB83                   =====
                                                                ------>MYB46(1)                -----
                                                                --------->MYB52(1)             -----
                                                               --------->MYB55(1)            -------
                                                              <---------MYB46(2)       <---------bZIP60(1)
                                                          ------>ZmHOX2a(1)            --------->ANAC58
                                                         <---------ANAC58              --------->bZIP60(1)
                                                         <---------ANAC58 <---------DEAR3(1)--------
                                                  <------MYB83<---------MYB59  --------->MYB52(1)===
                                                  <------MYB46(1) --------->MYB46(3)   --------->ANAC58
                                              --------->YAB1 <---------ANAC55(2)    ----------->TGA1
                                             <---------YAB1  --------->ANAC55(2)------->TEIL<-------
                               <---------ZAT14--------->ATHB12<---------MYB111(1)   ----------->HVH21
 
tgaattcaattgctaagtgaaacaatttcagtagtatagttcataactatgataggttttccttacctaacaatccggcgatgaacggtgacgaaaccaa  11787700
                               <---------At4g35610
                               --------->At4g35610
                             <---------WRKY12
                            --------->DOF5.7(2)
                           <-----------HVH21
                          <---------O2
                          >>>>>>>>>>HY5
                          --------->O2
                          <---------ANAC46
                          <---------TGA2(1)
                          --------->bZIP60(1)
                          <---------bZIP60(1)
                          <---------bZIP60(2)
                          <---------ANAC55(2)
                          --------->TGA2(1)
                          --------->TGA1a                    <---------ANAC58
-------->ANAC46           <---------TGA1a                    <---------ANAC46
---->GAMYB               <-----------STF1                  <---------MYB46(3)
----->MYB46(3)          <---------TGA2(2)               <---------ICU4
--->P<---------ZAT18   ----------->HVH21               --------->ICU4                      <--------
====================================MYC_MYB            <---------YAB1                   ----------->HVH21
->MYB83                ----------->TGA1              --------->YAB1                     --------->ALFIN1
->MYB46(1)            <-----------HVH21             <---------YAB1                  <------ZmHOX2a(1)
-->AtMYB61           <---------O2   ------>NtERF2 --------->YAB1                  --------->ANAC58
->MYB46(3)           --------->O2   --------->LBD16 --------->ICU4                --------->ANAC58
====================================MYC_MYB    --------->YAB1<---------ANAC58     <---------TOE2(3)
--MYB52(2)      --------->AtMYB61 <---------LBD16--------->ICU4                 --------->CCA1(2)
 
ccacgtagaacacttacgaccacaacgtgacgtcaactccggcgttacaacgatgatgatgatggctgggattgagatgtgagataaggaagtgatggtg  11787800
                 --------->ZAT2
                 --------->At4g35610
      <---------ANAC58
      <---------TGA1a   --------->REM1(2)
      <---------O2     --------->ALFIN1          --------->YAB1
      --------->TGA1a--------->ALFIN1           <---------YAB1                               <------
      --------->O2   <---------ANAC46         --------->YAB1                               <--------
      <---------ANAC55(2)          --------->CCA1(2)       <----------CDC5                 <--------
      --------->ANAC55(2)         --------->ARR11(3)     --------->ANAC58                 <-------GAMYB
      <---------ANAC58--------->REM1(2) <-------TEIL     --------->ANAC58                <---------MYB46(3)
-AtMYB61        --------->GLK1(2) <---------ARR11(3)   <---------ALFIN1            --------->ALFIN1
 
atgaagaagacgtgagaagaagctgtgtggagagggagatatatacatattatcatacacacgcttagggtttttctattagagaagttgggctgttatt  11787900
                     ------------>CBF        --------->ARR14(2)
               <------MYB83                  --------->GLK1(2)
 <------NtERF2 <------MYB46(1)               <---------ARR14(2)   <----------DOF2                <--
------CBF      <---------ANAC58       ---------->DOF2      ------------>CBF                  <------
-YAB1          <---------ANAC58  <---------------AGL15--------->LBD16                      ---------
-MYB52(1)     --------->MYB59    <---------ALFIN1    <------NtERF2<---------DAG2    <-----------GT1
 
gggcctcattagagagttgggtctcacaattctctcccacttaaagagaattcgtccccgagttcaatactttttgttcgactatattttccattcatac  11788000
                                                  <------ZmHOX2a(1)
                                                <---------TOE2(3)
                                               --------->YAB1                    <----------DOF2
                                              <---------ATHB12                  <---------ANAC58
                                          ------------>CBF                      <---------ANAC58
                                       <---------GLK1(1)                  <---------YAB1
   ---------->DOF2                     --------->GLK1(1)               --------->AHL20(2)  ---------
--------DOF2                          --------->ARR14(2)   ---------->ID1 <---------AHL20(2)
---CCA1(2)                            ---------->TaMYB80 <-----------RAV1(1)<------------CBF  ------
>YAB1                             <---------TOE2(3)    <----------DOF2 <---------AHL20(2) ----------
 
ctttagaaaagttttgtttatttcaaacacagtttttaagggatatccaataaggatgctttgttgctctgaatttttttattgctttagacatggtaaa  11788100
                                                        <---------ANAC46
                                                        <---------ANAC58
                                                    ------->MYC3
                                                    <-------MYC3
                                                    <-------PIF4
                                                    ------->PIF4
                                                    <-------MYC2
                                                    ------->PIF5
                                                    ------->MYC2              --------->AHL20(2)
                                                    ------->MYC4              <---------AHL20(2)
                                                    <-------PIF5             <---------AHL20(2)
       <---------YAB1                            <---------ANAC58            --------->YAB1
------------>CBF                                 <---------ANAC46        --------->ICU4
>At5g28300            <---------ZAT6             <---------ANAC58 <-----------HVH21    ------>ZmHOX2a(1)
----->ARR10<-------TEIL ------------>CBF  <----------DOF2<---------RAP2.6(3) --------->AHL20(2)
->GT1--------->YAB1   ----------->HVH21   <---------DAG2<---------ANAC58--------->At5g28300 <-------
 
attctcaattacgatacattttctagtgacaatgtctcttcgaaactttatggcatgtgccgttttaagcgtcgcagtaattaaaatttcctgatttttt  11788200
                                                           --------->YAB1
                                                          <---------YAB1
                                                     --------->AHL20(2)
                                 <---------AHL20(1)  <---------AHL20(2)
                                 --------->AHL20(1) <---------YAB1
                                 <---------ARR11(3) --------->ICU4                             -----
                             --------->YAB1       <---------ICU4                  --------->ATERF1(1)
       ----------->GT1  <---------AHL20(1)       <---------YAB1                 --------->ALFIN1
      --------->DAG2    <---------ARR11(3)       --------->ICU4            ---------->DOF2 <--------
     ---------->DOF2    --------->AHL20(1)     --------->YAB1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
--AHL20(2)          --------->YAB1            <---------YAB1       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
 
ttttaaaaaaaagttaatctatatcaaaatattcaaaatatttcttcatatgataattaatatgataactaaaactctcaaaggtgtctcccaaaatcat  11788300
          xxxxxxxxxxxxxxxx>smallRNA(i)                   ------->TEIL
   <-----------HVH21                                <---------ANAC58
  ------->GAMYB       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      <---------ANAC46
--------->At4g35610 <---------ANAC46                <---------ANAC58            <---------ANAC58
<---------At4g35610 <---------ANAC58              <-----------GT1               <---------ANAC58
---->At4g35610      <---------ANAC58           <---------ICU4   <---------TOE2(3)    <xxxxxxxxxxxxxx
-ARR11(3)----------->RAV1(2)            --------->ZAT18 <---------CCA1(2)  <---------AtLEC2  <------
 
ctcaactgtctcgcctgaatattgtgtgtattgtttccaagtgtgaacaatttttacttgaatcttcgaggttgtcttgaatggcttgatagtattgagg  11788400
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AGI:  At3g30160.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G35320.1)
Range:  from: 11786129    to: 11787856    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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