Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 --------->RAP2.6(2)                                                               --------->RAP2.3(2)                                                               <---------ANAC46                                                               ----------->GT1                                                              --------->RAP2.3(1)                                                              <------NtERF2                                                             <---------ATERF1(1)                                                            --------->RRTF1(2)                                                            --------->RAP2.3(3)                                                            --------->ATERF1(2)                                                            ------------------>SPL14                                                            --------->DEAR3(1)                                                            --------->DREB2C(2)                                                            --------->RAP2.6(2)                                                            <---------DEAR3(1)                                                            --------->RRTF1(3)                                                           --------->RAP2.6(1)                                                           --------->ATERF1(1)                                                           --------->RRTF1(1)                                                           --------->DEAR4(2)                                                           --------->ERF1                                                           --------->RAP2.3(1)                                                          <---------ATERF1(1)                                                          ------>NtERF2                                                          --------->ABI4(1)                                                         --------->DEAR3(1)                                                         --------->ANAC46                                                        --------->MYB46(3)                                                      <---------ALFIN1                             <-                                             --------->ATERF1(2)           <---------ANAC46        --                                             <---------HSFB2a(2)           <---------ANAC58        --                                             <---------ANAC46--------->ABI4(1)        --------->GATA12                 <---------TOE2(3)           <---------ATERF1(2)--------->LBD16   <-------GAMYB    ==            --------->ATHB12                 --------->HSFB2a(2)--------->At5g28300   <---------GATA12           <---------YAB1                   <---------LBD16--------->ORA47(2)<---------KAN1        <-           --------->ICU4         --------->SPL7(1)  <---------KAN1  --------->DOF5.7(1)      -------         -------->HAHB4           ------->TEIL--------->LBD16------>NtERF2 <---------ANAC58  <-------         <---------ICU4           <---------ARR11(2)<-----------HVH21--------->DAG2 --------->WRKY38(1)         --------->YAB5         <---------ZAT18    --------->YAB1   --------->DOF5.7(1) ------>ZmHOX2a(2)        <---------YAB1          <---------SPL7(1)--------->ANAC58   =================================        --------->ICU4         <---------ANAC58  --------->ANAC58   ---------->DOF2 --------->WRKY12< ->ALFIN1--------->YAB1        <---------ANAC58<------NtERF2--------->RAP2.3(2)   ===================   gcaagtgaaaatgattattgaagttatcgctaagcgtacccatagtgccggaagcatcaccgccgccgtaaaaagtggcatgagcgttgatccaaggtcc  11014200                                   --------->RAP2.6(2)                     ------>NtERF2 --------->DEAR3(1)                     <------NtERF2--------->ATERF1(1)                    --------->ANAC58                    --------->ANAC58                    --------->ANAC46------>NtERF2             <---------AtMYB61   <---------At4g35610         --------->LBD16 --------->ANAC46         ------>NtERF2   ----------->HVH21       <---------LBD16   =========================================bZIP_DOF     --------->DEAR3(1)  --------->O2    --------->MYB46(3)   <---------O2    --------->DEAR3(2)   <---------TGA1a ----------->HVH21 --------->ZAT18--------->MYB46(3) --------TGA1a<------MYB83       <---------ATERF1(1)           <------ZmHOX2a(1) ------->O2 =======================MYC_MYB              --------->DAG2 ------->TGA1a<------MYB46(1)    --------->At4g35610    --------->DOF5.7(1) ====================MYC_MYB <---------DEAR3(2)   --------->ANAC58 --------O2 <--------P   --------->TGA1a         <---------------------WRI1 -->PCF2--------->LBD16 ------>NtERF2          --------->DEAR3(1)--------->At4g35610 ----HVH21<------NtERF2<---------ALFIN1 ----------->HVH21  --------->TOE1(2) ========bZIP_DOF  --------->SPL7(1)<---------RAP2.6(3)--------->DOF5.7(1)   ---------->DOF2 -----------HVH21 --------->ATERF1(1)<------NtERF2--------->ANAC58     --------->MYB46(3) ========MYC_MYB <---------SPL7(1)--------->RAP2.3(1)  ---------->DOF2------->TEIL                  <   catgtgaccgccgggatggtgtccgccacgacggtagccgccctgaacgcagacggaaaaagctaggagatgaaccacgagaagcgagattactaaaact  11014300                                                                                                   <-                                                                                                   <-                                                                                                   <-                                 --------->DOF5.7(1)                                               <-                               ---------->DOF2                                                     <-                     --------->YAB5                                                               ---         --------->ANAC58   --------->ANAC58                                                      ---         ----------->GT1    --------->ANAC58     --------->DOF5.7(1)                  --------->GATA12         --------->ANAC58   --------->AtLEC2    --------->MYB52(1)                    <---------GATA12    <---------ANAC46 --------->YAB1            ---------->DOF2                     <------ZmHOX2a(1) ---------TOE1(2) --------->WOX13(1)  ----------->GT1     --------->AHL12(2)   <---------KAN1     <--   cccatgttgtgaagcaaaaacaatcacaacatgcaaaggagagaaaaaacaaagggtgttttttttttgtcaaaatacagaatgaggagatgtgagaagt  11014400         ------->TEIL <---------ANAC46                                                                  --------->YAB1 --------ANAC58                                                                   <---------ATHB12 -----MYB46(1)                                                                  --------->WOX13(1) --------ANAC58                                                               <---------YAB5    <---- -----MYB83                                               ---------->DOF2    ------->TEIL   --------- --------ANAC46                                   <---------ARR14(2)       --------->YAB5   --------- ------>MYB46(2)                                  --------->ARR14(2)      --------->ICU4    --------- ------>MYB111(2)              ----------->GT1   <------ZmHOX2a(1)        <---------YAB5    --------- -------AtMYB61     >>>>>>>>>TBF1         <------ZmHOX2a(1)           --------->At5g28300<-------TEIL   ttggtgtgatgaaactggagaagaagaagagagtggtataaataggaagaaggattcagacaaagttttagcggtaatgaatcaatcagggtccatgcaa  11014500                                 --------->AHL12(2)                               <---------AHL12(1)                               <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL25(3)                               --------->AHL12(3)                               <---------AHL12(3)                               <---------AHL25(2)                               --------->AHL25(2)                               <---------AHL25(1)                               --------->AHL25(1)                              <---------AHL20(2)                              <---------AHL20(1)                              --------->AHL25(3)                              --------->AHL20(2)                              <---------AHL25(2)                              --------->AHL12(3)                              --------->AHL25(1)                              --------->AHL20(3)                              <---------AHL20(3)                              <---------AHL25(1)                              --------->AHL25(2)                             <---------AHL12(2)                             --------->AHL12(2)                            <---------WOX13(2)                            --------->WOX13(2)                          --------->AHL25(3)                         <---------AHL20(2)                               --------->DOF5.7(1)                         --------->AHL20(3)                               --------->DAG2                         --------->AHL25(2)                              ---------->DOF2                         <---------AHL20(1)                         --------->RVE1(2)                         <---------AHL20(3)                   <---------------------WRI1                         <---------AHL25(2)                 --------->TOE1(2)  --------->ATHB12       --------->AHL20(2)                 --------->DEAR3(1)         --------->YAB5 <----------DOF2        --------->YAB1                      --------->TOE2(2)          --------->TOE2(3) <---------YAB1        <---------YAB1                      --------->MYB46(3)          --------->YAB1 -----At4g35610      <---------ICU4                      --------->ARR14(2)           ----------->GT1 >ANAC46            --------->ICU4                       --------->ARR11(2)     ----------->GT1 >ANAC58        --------->ZAT14--------->AHL12(1)        <---------ARR14(2)     <------MYB83 >AtLEC2        <---------ZAT14--------->AHL25(3)        <---------ARR11(2)--------->DOF5.7(1)<------ >ANAC58   <---------ZAT14<---------YAB1   ----------->GT1 --------->DEAR3(2)   <------MYB46(1)*TSS   ctgcttattggtcttcactatacttattataatttaatttttgaagggtttaacatgtagaaccgacgaaaatcaaaaaggaaggtgaatgttaatatgt  11014600                                                                                   --------->KAN1                                                                                  <---------RVE1(2)                                                                                  <---------ARR11(3)                                                                             <---------ARR14(2)                                                                             --------->ARR11(2)                                                                             --------->RVE1(2)                                                                          <---------ANAC55(2)                                                                          <---------ANAC58                                                                    <---------AHL12(3)                                                                    <---------AHL25(1)                                                                    --------->AHL20(2)                                                               ----------->GT1    --------->ARR11(3)                                                         --------->ANAC58 --------->ANAC55(2)                                                 <-----------HVH21  <---------AHL20(2)           <---                   ----------->GT1             --------->DOF5.7(1)  --------->AHL25(1)         <-----                 <---------AHL12(2)          ---------->DOF2 <------------CBF<---------ARR11(2)------                 <------------CBF    <---------KAN1  --------->ANAC58 --------->KAN1 <---------YAB1         ---------->DOF2--------->ICU4    --------->YAB1 --------->ANAC58 <---------ANAC58  <-------- ---ANAC55(2)  --------->AHL12(1)   --------->GATA12 --------->ANAC58<---------AHL25(3)     ---------   aagagttggaccaaagaaaaattgtcaaaatgagttggaatctatcgtaaaggtcactcaagaaattgaaataaatgcgtatcagatattagtggatgtg  11014700                                 <---------DOF5.7(1)                                 <----------DOF2                                <---------DOF5.7(1)                           <-----------GT1                          <-----------GT1                       <---------AHL25(1)                       --------->AHL25(1)                       --------->AHL20(3)                       <---------AHL20(3)                      --------->AHL12(1)                             ------>ZmHOX2a(1)       ----------->GT1<---------AHL12(1)                      <---------ARR14(2)   <---------RVE1(2)  --------->AHL25(3)                      --------->ARR11(2) <---------ZAT6      <---------RVE1(1)                        --------->ARR14(2) <---------YAB5     <---------GLK1(2)                     <---------YAB5 ------RVE1(2)      <---------ARR11(3)                    <---------YAB1 ----YAB1           --------->ARR11(3)   --------->AHL20(2)--------->YAB1 ----->HVH21        <---------RVE1(2)<----------DOF2    <-----------GT1         --------->ATHB12 -GATA12      <---------YAB1    <---------DAG2  ---------->DOF2--------->KAN1  --------->ICU4 >GATA12     --------->TOE2(3) <---------DOF5.7(1)      --------->YAB1         <---------YAB1   atagtgatactgtaacattatagatttttttccccctttctttttatatagaaagtatttatcatatactcctatggagacatgatttgcaatagcattt  11014800                                                                  ----------->GT1                                                                  --------->LBD16                                                                <---------LBD16                                                              <-----------GT1                                                             --------->KAN1                                                           <---------AHL20(3)                                                           --------->AHL25(2)                                                           <---------AHL25(2)                                                           --------->AHL20(3)                                                         <---------AHL25(2)                                                         --------->AHL20(1)                                                         <---------AHL12(2)                                                         <---------AHL12(3)                                                         --------->AHL20(3)                                                         --------->AHL25(2)                                                         <---------AHL20(3)                                                        <---------AHL25(3)                                                        <---------AHL25(2)                                                        --------->AHL20(2)                                                        --------->AHL12(3)                      -----                                                        <---------AHL12(3)                      -----                                                        --------->AHL25(2)                      <----                                                        <---------AHL25(1)                      <----                                                        --------->AHL25(1)                      -----                     <---------ANAC46                   --------->YAB1                          <----           <---------YAB1                              <---------AHL20(2)                      ------         --------->YAB1                                --------->AHL12(1)                      ------         <---------ICU4                              --------->AHL12(2)                        ------        --------->ICU4                               <---------AHL12(2)           --------->RVE1(2)       --------->WOX13(2)                           <---------AHL20(2)            --------->GLK1(2)       <---------AHL12(2)                           <---------AHL25(3)           <---------GLK1(2)<--       <---------WOX13(2)                           --------->AHL20(2)    --------->DAG2       <-----      --------->AHL12(2)                           --------->AHL20(2)    ---------->DOF2       <-----     --------->AHL20(2)                           <---------WOX13(2)   <---------WOX13(2)      ------  --------->YAB1     <---------ANAC58             --------->AHL12(2)  --------->YAB1           <----- <-------TEIL        <---------ANAC58             --------->WOX13(2) <---------KAN1            <-----   acattcataaattatgagggtttgagtgtttgagacagacaatatagagcttaataaataatattatccggataataaagttagaatctaaatgcaatat  11014900                             <---------WOX13(2)                           --------->AHL12(1)                           <---------AHL12(1)                           --------->AHL20(2)                           --------->AHL12(3)                           <---------AHL25(3)                           <---------AHL20(2)                           <---------AHL12(3)                           <---------AHL25(1)                           --------->AHL25(1)                          <---------AHL20(1)                          --------->AHL20(1)                          --------->AHL20(2)                          <---------AHL25(1)                          <---------AHL20(2) ---->AHL12(3)            <---------AHL25(2) ---->AHL25(2)            --------->AHL25(2) -----AHL25(2)            --------->AHL25(1) -----AHL12(3)            --------->AHL25(3) ---->AHL12(2)            --------->AHL12(1) -----AHL12(2)            <---------AHL12(1) --->AHL20(3)       --------->ANAC46 --->AHL25(2)       --------->ANAC58 --->AHL12(1)       --------->ANAC58 -------AHL20(2) --------->ZAT14             <---------AHL20(2) ----AHL12(1)    <---------ZAT18            <---------YAB1                        <---------WOX13(2) ----AHL25(2)    <---------ZAT14            --------->AHL25(3)                    --------->WOX13(2) --->AHL20(1)    --------->ZAT18           --------->AHL12(2)        <----------DOF2 ----ARR11(3) <---------At5g28300          --------->AHL12(3)  <----------DOF2 --------------->AGL15 ----AHL20(1)<-----------GT1 --------->WOX13(2)          ----------->GT1      --------->TOE2(3)   tttttggtccaagttttactgcacacaatttatttaagaagacatatttattgtatgtctggttacttttacttttgttttcttaatttgttagaaattg  11015000                                         <------MYB83                                         <------MYB46(1)                   --------->At4g35610 <--------P                <---------At4g35610    <---------MYB52(1)                --------->At4g35610  <---------MYB46(3)              --------->ATHB12           <---------LBD16        ------------>AtMYB77              <---------YAB5        --------->At4g35610         --------->ARR11(2)       --------->MYB52(1)           --------->GATA12           <---------At4g35610         <---------ARR11(2)----------->GT1        --------->YAB1   <-----------HVH21      <---------ZAT2 ----------->RAV1(1)      --------->ALFIN1    <----------DOF2  <---------GATA12        <-------TEIL   gagcaacattgtattcggagcagaagaagtggtgaagaacggttgggacttttcataaaactgtagatgtgtcattggacaaaaatgggtacagctgttt  11015100  Previous    Next  AGI:  At3g29030.1    Description:  ATEXPA5 (ARABIDOPSIS THALIANA EXPANSIN A5). Identical to Expansin-A5 precursor (EXPA5) [Arabidopsis Thaliana] (GB:Q38864); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to alpha-expansin [Cicer arietinum] (GB:CAC19183.2); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contains InterPr Range:  from: 11012545    to: 11014595    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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