Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ----------->GT1                                                               <---------ANAC46                                                               --------->RAP2.3(2)                                                               --------->RAP2.6(2)                                                              --------->RAP2.3(1)                                                              <------NtERF2                                                             ------>NtERF2                                                            --------->RAP2.6(2)                                                            --------->DEAR3(1)                                                            --------->RRTF1(2)                                                            --------->RRTF1(3)                                                            --------->DREB2C(2)                                                            --------->RAP2.3(3)                                                            --------->ATERF1(2)                                                            --------->RAP2.3(2)                                                            <---------DEAR3(1)                                                           --------->ERF1                                                           --------->RAP2.3(1)                                                           --------->ORA47(2)                                                           --------->DEAR4(2)                                                           --------->RRTF1(1)                                                           --------->ATERF1(1)                                                          <---------ATERF1(1)                                                          ------>NtERF2                                                          --------->ABI4(1)                                                         --------->ANAC46                                                         --------->DEAR3(1)                                                        --------->MYB46(3)                                                      <---------ALFIN1                                             <---------ANAC46--------->ABI4(1)                     ==                                             --------->ATERF1(2)           <---------ANAC46        --                                             <---------ATERF1(2)           <---------ANAC58        <-                 <---------TOE2(3)           <---------HSFB2a(2)--------->At5g28300                --            --------->ATHB12                 --------->HSFB2a(2)--------->LBD16               -------           <---------YAB1                   <---------LBD16--------->RAP2.6(1)    ===================           --------->ICU4         ------->TEIL      <-----------HVH21      <---------ANAC58  <-------         <---------ICU4           --------->SPL7   --------->YAB1    --------->DAG2     ------>ZmHOX2a(2)         -------->HAHB4         <---------SPL7--------->LBD16<---------ATERF1(1)  <-------GAMYB    <-        <---------YAB1          <---------ZAT18  --------->ANAC58   =================================        --------->ICU4         <---------ANAC58  --------->ANAC58   ---------->DOF2 --------->WRKY12< ->ALFIN1--------->YAB1        <---------ANAC58<------NtERF2------------------>SPL14--------->WRKY38(1)   gcaagtgaaaatgattattgaagttatcgctaagcgtacccatagtgccggaagcatcaccgccgccgtaaaaagtggcatgagcgttgatccaaggtcc  11014200                     <------NtERF2 --------->RAP2.6(2)                     ------>NtERF2 --------->DEAR3(1)                    --------->ANAC58                    --------->ANAC46------>NtERF2                    --------->ANAC58<---------RAP2.6(3)             <---------AtMYB61    --------->RAP2.3(1)         --------->LBD16 <---------O2         ------>NtERF2   --------->O2       <---------LBD16   --------->TGA1a     --------->DEAR3(1)  =========================================bZIP_DOF    --------->MYB46(3)   ----------->HVH21    --------->DEAR3(2)   --------->ANAC46 ----------->HVH21 --------->ZAT18--------->ATERF1(1) ====================MYC_MYB      --------->MYB46(3) ------->O2 =======================MYC_MYB --------O2 <--------P   <---------TGA1a          --------->ANAC58 ------->TGA1a<------MYB46(1)    --------->At4g35610           <------ZmHOX2a(1) -->PCF2--------->LBD16 ------>NtERF2            <---------------------WRI1 ========MYC_MYB   --------->SPL7<---------At4g35610    --------->DAG2 ----HVH21<------NtERF2<---------ALFIN1 ----------->HVH21  --------->TOE1(2) ---------->DOF2 --------TGA1a<------MYB83   <---------DEAR3(2)--------->DEAR3(1)--------->At4g35610 ========bZIP_DOF --------->ATERF1(1)<------NtERF2--------->ANAC58     --------->MYB46(3) -----------HVH21<---------SPL7  <---------ATERF1(1)   ---------->DOF2------->TEIL                  <   catgtgaccgccgggatggtgtccgccacgacggtagccgccctgaacgcagacggaaaaagctaggagatgaaccacgagaagcgagattactaaaact  11014300                                                                                                   <-                                                                                                   <-                                                                                                   <-                               ---------->DOF2                                                     <-         --------->ANAC58   --------->ANAC58                                                       <-         --------->ANAC58   --------->ANAC58                                                      <--         ----------->GT1    --------->AtLEC2    --------->MYB52(1)                                ---    <---------ANAC46 --------->YAB1            ---------->DOF2                                    --- ---------TOE1(2) --------->WOX13(1)  ----------->GT1                              <------ZmHOX2a(1)   cccatgttgtgaagcaaaaacaatcacaacatgcaaaggagagaaaaaacaaagggtgttttttttttgtcaaaatacagaatgaggagatgtgagaagt  11014400         ------->TEIL <---------ANAC46                                                                               <---- --------ANAC58                                                                             --------- --------ANAC46                                                                             --------- --------ANAC58                                                                    --------->YAB1 -----MYB46(1)                                            ---------->DOF2         <---------ATHB12 -----MYB83                                       <---------ARR14(2)            --------->WOX13(1) -------AtMYB61                                   --------->ARR14(2)         ------->TEIL   --------- ------>MYB46(2)               ----------->GT1   <------ZmHOX2a(1)        --------->ICU4    --------- ------>MYB111(2)   >>>>>>>>>TBF1         <------ZmHOX2a(1)           --------->At5g28300<-------TEIL   ttggtgtgatgaaactggagaagaagaagagagtggtataaataggaagaaggattcagacaaagttttagcggtaatgaatcaatcagggtccatgcaa  11014500                              --------->AHL20(2)                              <---------AHL20(1)                              <---------AHL20(2)                         <---------AHL20(2)                               --------->DAG2                         <---------AHL20(1)                              ---------->DOF2  --------->ATHB12       --------->AHL20(2)                   <---------------------WRI1 <---------YAB1         --------->YAB1                      --------->TOE1(2) <----------DOF2       <---------YAB1                       --------->TOE2(2)          --------->TOE2(3) -----At4g35610      <---------ICU4                         --------->DEAR3(1)         --------->YAB1 >ANAC58            --------->ICU4                         --------->MYB46(3)         ----------->GT1 >ANAC58        --------->ZAT14<---------AHL20(2)        --------->ARR14(2)     <------MYB83  <------ >ANAC46        <---------ZAT14--------->AHL20(2)        <---------ARR14(2)     <------MYB46(1) >AtLEC2   <---------ZAT14<---------YAB1   ----------->GT1 --------->DEAR3(2)   ----------->GT1*TSS   ctgcttattggtcttcactatacttattataatttaatttttgaagggtttaacatgtagaaccgacgaaaatcaaaaaggaaggtgaatgttaatatgt  11014600                                                                                     <---------YAB1                                                                                  --------->ARR11(3)                                                                    <---------AHL20(2)                                                               ----------->GT1    <---------ARR11(3)                                                         --------->ANAC58 <---------ANAC58                                                     --------->ANAC58     <---------ANAC58                                                     --------->ANAC58     --------->ANAC55(2)                   ----------->GT1               <-----------HVH21  --------->AHL20(2)         ---------->DOF2--------->ICU4       ---------->DOF2 <------------CBF<---------ARR14(2)------ ---ANAC55(2)    <------------CBF         --------->YAB1 --------->ANAC58 <---------ANAC55(2)  <-----   aagagttggaccaaagaaaaattgtcaaaatgagttggaatctatcgtaaaggtcactcaagaaattgaaataaatgcgtatcagatattagtggatgtg  11014700                           <-----------GT1                     <---------RVE1(1)                        --------->ARR14(2)                    <---------GLK1(2)<----------DOF2          <---------ARR14(2)                    --------->ARR11(3)                    <---------YAB1       ----------->GT1    <-----------GT1               <-----------GT1         --------->ATHB12 <---------ZAT6     <---------ARR11(3)   --------->AHL20(2)--------->YAB1      <---------YAB1 ----->HVH21  <---------YAB1     <----------DOF2        --------->YAB1         --------->ICU4 ----YAB1    --------->TOE2(3)  <---------DAG2  ---------->DOF2      ------>ZmHOX2a(1)   atagtgatactgtaacattatagatttttttccccctttctttttatatagaaagtatttatcatatactcctatggagacatgatttgcaatagcattt  11014800                                                                  --------->LBD16                                                                  ----------->GT1                                                                <---------LBD16                     <---------ANAC46                         <-----------GT1           <---------YAB1                                --------->AHL20(1)         --------->YAB1                                 --------->YAB1         <---------ICU4                                 --------->AHL20(2)        --------->GLK1(2)        --------->ICU4                                 <---------AHL20(2)        <---------GLK1(2)<--     --------->AHL20(2)                             <---------AHL20(2)    --------->DAG2       ------  --------->YAB1     <---------ANAC58               --------->AHL20(2)   ---------->DOF2       <----- <-------TEIL        <---------ANAC58              --------->AHL20(2) --------->YAB1           <-----   acattcataaattatgagggtttgagtgtttgagacagacaatatagagcttaataaataatattatccggataataaagttagaatctaaatgcaatat  11014900                           --------->AHL20(2)                           <---------AHL20(2)                          --------->AHL20(1)                          <---------AHL20(1)                          --------->AHL20(2)                          <---------AHL20(2)                    --------->ANAC58                    --------->ANAC46                    --------->ANAC58                 --------->ZAT18                 --------->ZAT14 -------AHL20(2) <---------ZAT14 --->AHL20(1)    <---------ZAT18                         ----------->GT1       --------------->AGL15 ----AHL20(1) <---------At5g28300            <---------AHL20(2)      <----------DOF2 ----ARR11(3)<-----------GT1                <---------YAB1     <----------DOF2--------->TOE2(3)   tttttggtccaagttttactgcacacaatttatttaagaagacatatttattgtatgtctggttacttttacttttgttttcttaatttgttagaaattg  11015000                                         <------MYB83                                         <------MYB46(1)                                  ------------>AtMYB77                                  --------->MYB52(1)                   --------->At4g35610 <---------MYB52(1)                <---------At4g35610    <--------P                                         <---------ZAT2                --------->At4g35610  <---------MYB46(3)                                   --------->At4g35610           <---------LBD16 ----------->GT1        --------->YAB1     --------->ATHB12     <---------At4g35610 ----------->RAV1(1)      --------->ALFIN1    <----------DOF2      <-----------HVH21   <-------TEIL   gagcaacattgtattcggagcagaagaagtggtgaagaacggttgggacttttcataaaactgtagatgtgtcattggacaaaaatgggtacagctgttt  11015100  Previous    Next  AGI:  At3g29030.1    Description:  ATEXPA5 (ARABIDOPSIS THALIANA EXPANSIN A5). Identical to Expansin-A5 precursor (EXPA5) [Arabidopsis Thaliana] (GB:Q38864); similar to ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15) [Arabidopsis thaliana] (TAIR:AT2G03090.1); similar to alpha-expansin [Cicer arietinum] (GB:CAC19183.2); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Expansin; (InterPro:IPR002963); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contains InterPr Range:  from: 11012545    to: 11014595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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