Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->AHL20(1)                                              <---------AHL20(2)                                              <---------AHL20(1)                                              --------->AHL20(2)                                             --------->AHL20(2)                                   --------->AHL20(1) ---------HSFB2a(2)                <---------AHL20(1) ---------HSFC1(1)              <---------AHL20(2)                                                  < -------->HSFB2a(2)             <---------AHL20(1)                                   --------->AHL20(2) ----->ARR11(3)                 --------->AHL20(2)                         --------->ANAC58        <- ------ARR14(2)    <---------DAG2  --------->AHL20(2)                      --------->ANAC58        <- -----CCA1(2)      <----------DOF2 <---------AHL20(2)                 <-----------ARR10            -- ---GT1    --------->TOE2(3)    --------->AHL20(1)         --------->YAB1  --------->ANAC46    <-----   atctagaagacaacatcaaaactttttgatgcaataaaatattagaaataaattcaaacaagaataaatgcgaatttaagccaaaaaaaaaatactagga  10566600                                                                                            ---------                                                                                            <--------                                                                                           --------->YAB1                                                                                   <---------AHL20(1)                                                                  <---------AHL20(1)   <---------AHL20(2)                                                                  <---------ARR11(3)--------->AHL20(2)                                                                  --------->ARR11(3)<---------AHL20(2)                                                             <---------WOX13(1)    <---------AHL20(2)         ---------->DOF2                                  <---------YAB1        <---------ICU4        <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                --------->AHL20(2)   <---------AHL20(2)     <-----------GT1                   <---------YAB1     <---------AHL20(2)   <---------ATHB12     < ---------YAB1  <---------ANAC58     --------->YAB1    <---------AHL20(1)      <---------ATHB51     - --------AHL20(2)           <---------AHL20(1)        --------->AHL20(2)       --------->ICU4      <- --------AHL20(1)           --------->ARR11(3)    --------->AHL20(2)           --------->AHL20(2)---- ------->AHL20(1)      --------->AHL20(2)         <---------AHL20(2)  <-------TEIL --------->AHL20(2) -ZmHOX2a(1)    <---------ANAC58     --------->AHL20(2)--------->AHL20(1)--------->AtLEC2 <---------YAB1   ttatatttcaccaaagtttcttacatataatatatacaattataaatatcaaataaatatataattgatatattcatacaaataattaatttatgatatt  10566700                                                        <---------AHL20(2)                                                     <---------AHL20(1)                                        <---------AHL20(2)                                        --------->ARR11(3)                                        --------->AHL20(2)                                        <---------ARR11(3)                                        <---------AHL20(1)                                        --------->AHL20(1)     <---------ANAC46                                       --------->AHL20(2)--------->ATHB12      <---------ANAC55(2)    --------->ATHB12                 --------->AHL20(2) <---------YAB1         --------->ANAC46 >ARR11(3)                         --------->AHL20(2)--------->AHL20(1)        --------->ANAC58 -ARR11(3)                 <---------ARR14(2)        <---------AHL20(2)      <-----------GT1 ---------ICU4             --------->ARR11(3)        --------->AHL20(2) <---------YAB1 -------->ATHB12           <---------GLK1(2)        --------->YAB1 <---------ZAT6 --------YAB1              --------->ARR14(2)  --------->YAB1  <---------ANAC58--------->ANAC58 ----->YAB1               <------ZmHOX2a(1)<---------AHL20(2)  <---------ANAC58--------->ANAC55(2)   gatcattgatgggattaaacgattaataggattttcaaaaaatatattatcgtattatattattgacttgtgttatgttttacgcaagtttcaacttgaa  10566800                                                                                         <---------TOE1(3)                                                                                         <---------TOE2(3)                                                                               --------->AHL20(2)            <---------AHL20(2)                                                 <---------AHL20(2)          <---------YAB1                                                      <---------AHL20(2)       --------->AHL20(1)                                             ------->TEIL   <------------CBF       <---------AHL20(2)                                     --------->ARR11(3)   <---------AHL20(2)       <---------AHL20(1)                                 <------ZmHOX2a(1)--------->AHL20(2)      <-       --------->AHL20(2)                               <---------TOE2(3)  <---------AHL20(2)  <-----   <---------AHL20(2)                        --------->DAG2   <---------AHL20(1)   --------->AHL20(2)  --------->AHL20(2)       <-----------GT1  ---------->DOF2   <---------ARR11(3)  --------->AHL20(2)   acgatataatttattattttgtagaggtattactgtatacaacttataaagttgattttaggaatatatatgtatatttatttatttaattgaggttata  10566900                                                                    --------->ICU4                                                                    <---------ATHB12                                                              ------>MYB83                                                              ------>MYB46(1)                                                              --------->MYB52(1)                                      --------->AHL20(2)    <---------MYB59                           <---------TOE2(2)        <------ZmHOX2a(2)                           <---------TOE1(2)       --------->ARR11(3)                          ------>ZmHOX2a(1)        <---------ARR11(3)<---------ICU4                          =================================HOX2a_HOX2a--------->WOX13(1)             <---------ALFIN1         ----------->TBP       <---------MYB46(2) --------REM1(1)<---------TOE2(2)   --------->HSFB2a(2)   -------->P<---------YAB1 ----YAB1  ----------->RAV1(1)      <---------HSFB2a(2)<---------MYB52(2) *TSS                     --   gttgtaacttagccaacacaggtttctcctatgttcttctataaatacttgtagatcactaacctaactaatcattcaaacttcaactctcgctaatact  10567000           <---------ARR14(2)           --------->ARR14(2)                       <----------DOF2           <---------ARR11(3)                  <-----------GT1           --------->ARR11(3)                <-----------GT1          --------->CCA1(1)           ----------->GT1          --------->RVE1(1)          --------->HSFB2a(2)                                           <-  --------->At4g35610    <---------YAB1<---------MYB52(1)                          <---------AHL20(2) -------->DOF2 ------>ZmHOX2a(1)     <---------HSFB2a(2)                <---------YAB1    <-------TEIL   tgaaagctcaaaatatcctcttgtattctgatcaaatttctggtaattttctctcttttaatctctaactcattttgattcttatatatatgttcatatt  10567100                                            <-----------GT1                                        <---------ICU4                                       <---------YAB1                          ------->TEIL                                    <---------YAB1                    --------->ANAC46          <----                                  --------->YAB1                      --------->ANAC58      ---------                               <---------AHL20(2)                     --------->ANAC58  <-----------GT1                              --------->AHL20(2)                  <-----------GT1     <-----------GT1                        <-----------GT1--------->ICU4         --------->AHL20(2)    <---------AHL20(2)                   <---------MYB52(1)--------->YAB1    <---------ANAC46 --------->AHL20(2)  <-------- --------YAB1    --------->ETT(1)<---------YAB1<----------DOF2<---------AHL20(2)  <---------AHL20(2)   tctgatttttagccaattgtcggtattttctatttattatcataattttctttttcttcgtgaattttttacaagtaaatgtatattttttctctgttct  10567200                                                               --------->ZAT2                                                    <---------------AGL15                                                    --------------->AGL15    <---------AHL20(2)                            <-----------------AG  --------->ARR14(2)   --------->AHL20(2)           ---------->DOF2  --------->AHL20(1)     <---------ARR14(2)  <---------YAB1       --------->AHL20(2)        --------->ARR11(3)     ------->TEIL --------->AHL20(2)    <---------AHL20(1)        <---------ARR11(3)    <---------CCA1(2) -----YAB1             <---------AHL20(2)       --------->RVE1(1)  <---------ANAC46 >ZAT14            --------->YAB1   <---------GLK1(2)          <---------ZAT2             <---------CCA1(2) -ZAT14           <---------ATHB12--------->ICU4--------->CCA1(1) <---------DEAR3(1)    ------>ZmHOX2a(1)   gaatattatataagtgactaatcaaaaaatttagaaaagattgtttcgaaatatcttatttgggaagctcggtgtatccaaaactctgtcctaaatctct  10567300                                                                                        <---------ANAC58                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                              --------->ANAC58     --                                                            --------->ARR11(3)--------->ANAC58   ----                   ---------->ID1                         <---------ARR14(2)  <---------ALFIN1   <---                  <-----------GT1<---------YAB1           --------->ARR14(2)<---------ALFIN1   ------             <---------AHL20(2) <---------ARR11(3)        --------->GLK1(2)<------NtERF2<---------ANAC58    <---------AHL20(2)          --------->ARR11(3) ---------->DOF2       --------->ANAC46      <-----   ctacatttttttgatttttttttcgttttagtaatatcatcgatggtgctatccaaagagaatatgttgaaatactcggcacaccttcgtgcttacaatt  10567400                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --           --------->AtMYB61                                                                       <-    --------->ALFIN1                                                                               --   <-------MYC3                                                                                    --   <-------MYC2                                             <---------ARR14(2)                    <--   ------->MYC2              <----------DOF2           --------->TOE2(3)                          <--   ------->MYC3 --------->LBD16                        --------->TOE1(3)               -------------- ------->LBD16 --------->HSFB2a(2)      <---------At4g35610 --------->ARR14(2)         <------------- ------------->AGL1      <---------ARR14(2)   --------->At4g35610                      -------------- ------LBD16   <---------HSFB2a(2)      --------->At4g35610<---------CCA1(2)       <---------At4g35610 --->ARR14(2)------>MYB46(1) ------>ZmHOX2a(1)<---------At4g35610         <-----------HVH21      <--- ----ARR14(2)------>MYB83--------->ARR14(2) <-----------RAV1(2)<---------YAB1      --------->At4g35610   ccgcatgtggagaccatccagaactcaaatcctttgattctgagcttcagcagaaaacctcaaatctgataaactcgttcacctctgatgccaaaactgg  10567500  Previous    Next  AGI:  At3g28300.1    Description:  AT14A. Identical to UPF0496 protein At3g28290/At3g28300 [Arabidopsis Thaliana] (GB:Q9XF11;GB:Q56XE6;GB:Q8GXJ7); similar to AT14A [Arabidopsis thaliana] (TAIR:AT3G28290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22906.1); contains InterPro domain Protein of unknown function DUF677 (InterPro:IPR007749) Range:  from: 10566974    to: 10568837    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version