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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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1        10        20        30        40        50        60        70        80        90        100 
                          <---------ICU4                   <-------GAMYB
                         <---------YAB1                   <---------MYB46(3)
           <---------ARR11(3)    --------->ANAC46   <---------ANAC55(2)
           --------->ARR14(3) <---------ZAT18       --------->ANAC55(2)                    ---------
-----TEIL  --------->ARR11(3)--------->AtLEC2  --------------->AGL15            --------->YAB1
-----GLK1(2)            --------->TOE2(3)     <---------YAB1                  --------->ARR11(3)
---->ARR14(2)       --------->YAB1       <---------ICU4  <---------YAB1  --------->ZAT14   <--------
-----ARR14(2)      <---------ATHB12     <---------YAB1   <---------AtMYB61    <---------ARR11(3)----
 
ttcgttcaaaacaaggtctccaaacatcatcaatgcacaaaacatcattaccattaagtgatggttgagtttgaactgaactatcttcatacttccataa  10288600
              -------->ATHB1
              --------->ATHB12
              <--------ATHB1
              --------->YAB1
              <---------ICU4
              <------------ATHB5
              --------->ATHB51
             <---------YAB1                                                       --------->GLK1(1)
   ---------->DOF2                             --------->ZAT6          ---------->DOF2
>HSFB2a(2)   <---------ATHB12                <-----------GT1          --------->YAB1
-HSFB2a(2)   --------->ICU4<-----------GT1----------->GT1 --------->AHL20(2) ----------->GT1
----->ZAT6 --------->WOX13(1)    ---------->DOF2         <---------ATHB12 <---------ZAT2
 
gactaataaagaaacaatcattggaactattacccatatagcacatagtaacactctccaattaaaccagtaatcaaagctggtgaattccaaaacattc  10288700
                                                          --------->AGP1
                                                          --------->ARR14(2)
                                                          <---------ARR14(2)
                                                    <----------DOF2
                                                   ------>ZmHOX2a(2)
                                                  <---------RVE1(1)
                                                 <---------ARR14(2)
                                                 --------->ARR11(3)
                                                 <---------ARR11(3)
                                                 --------->ARR14(2)
                                                 <---------ARR11(1)
                                                <---------CCA1(2)
                                                <---------ARR14(1)
                                             <---------LBD16
                                           --------->KAN4(2)------>ZmHOX2a(2)
                    ---------->ID1         --------->ARR14(2) --------->LBD16       --------->LBD16
                <---------ANAC58           <---------ARR14(2)--------->ANAC46     <---------LBD16
              <-----------GT1             --------->KAN4(1)<------ZmHOX2a(2)     --------->MYB52(1)
        <---------AHL20(2)                <---------KAN4(1)--------->CCA1(2)    <---------ALFIN1
   <-------TEIL <---------ANAC58 ------>ZmHOX2a(2)<------ZmHOX2a(2)         <------ZmHOX2a(2)
 
tcaagattcattttttttttcttgttctcttgttgatccgtctgaatattcggatcttttagatccgaaactcaatgggatcaacaccggacttgaaaac  10288800
                            ---------->DOF2
                       ----------->GT1                               <---------YAB1
                <---------ZAT14                                      <---------TOE2(3)
                <---------At4g35610                                  <---------TOE1(3)
                --------->At4g35610                      --------->ARR11(3)
 <------ZmHOX2a(2)    <------ZmHOX2a(1)     <---------WOX13(1)  <---------ZAT6                     <
 ============================HOX2a_HOX2a  --------->ATHB12  <---------YAB1                         -
<---------ARR11(3) <---------At4g35610  <---------WOX13(1)--------->CCA1(2)                   <-----
--------->AGP1  --------->ZAT14   --------->At4g35610    <---------ARR11(3)      <----------DOF2  <-
 
ccagatcaaaaactgtctctgcagaggagttaaaagtagcttaattgatttacatatagagatattagtgttaagattaagtagctttgattcttgatac  10288900
                                                                                                  --
                                                                                                ----
    <---------YAB1             ------>ZmHOX2a(1)                                         --------->CCA1(2)
 <---------MYB52(1)         ---------->ID1                 ----------->GT1              <---------ARR11(3)
---------ANAC55(2)      <---------ANAC58          ----------->HVH21                     --------->ARR11(3)
-------->ANAC55(2)      <---------ANAC58      <---------ANAC46                        ----------->ARR10
----ICU4               --------->HSFC1(2)     <---------ANAC58                 <------MYB46(1) <----
--------TOE2(3)        <---------HSFC1(2)     <---------ANAC58                 <------MYB83    -----
 
ttacgttatgttaagagaaatgtagaagcttgtccttgttcttgttgttgtgtgtgatggagaagtcaaattgaaacttggaaggtgatgagatatgaga  10289000
                                                                                    --------->HSFC1(2)
                                                                                    --------->HSFB2a(1)
                                                                                    <---------HSFB2a(1)
                                                                                    <---------HSFC1(2)
                                                                                  <---------PCF2
                                        <---------ALFIN1                     <---------TGA1a
                                       --------->ZAT18                       --------->ZAT2
                             --------->ALFIN1                                --------->O2
                             ----------->HVH21                               <---------ZAT2
                            <------NtERF2                                    --------->TGA1a
                          <---------ANAC46                                   <---------O2
                          <---------DEAR3(1)                               <-----------RAV1(2)
           *TSS           <---------DREB2C(2)                            <------ZmHOX2a(1)
--------->GT1      ------------>CBF  --------->PCF2                    --------->ANAC58
----->CCA1(2)  <---------KAN4(1)  <---------At4g35610             <----------ARF1 --------->TCP15(1)
-----ARR11(3)  --------->KAN4(1)  --------->At4g35610          --------->ALFIN1--------->ALFIN1
---->ARR11(3) ------------>CBF<-----------HVH21        <---------ZAT14 --------->ANAC58      <------
 
tatgtataaatctgaagaacaatccaatggcggtgtcagaggcccactggaatcggagaacacagagtggagacaaggacaggtgggaccttctccgttt  10289100
                                                                                          --------->ARR11(3)
                                                                                          <---------ARR11(3)
                                                                                         <---------GLK1(1)
                                                                                         --------->RVE1(1)
                                                                                         <---------CCA1(1)
                                                                                         --------->GLK1(1)
                                                 --------->AHL20(2)                      <---------RVE1(1)
                                                --------------->AGL15                    --------->CCA1(1)
                                                <---------------AGL15                   --------->ARR11(3)
                                                ===========================================MADS_MADS
                                    <---------ANAC46                                    <---------ARR11(3)
                                  <---------ANAC58                                  ---------->DOF2
                             <------MYB46(1)   <-----------------AGL1        <---------AHL20(2)
                    --------->O2  <---------ANAC55(1)                        --------->AHL20(2)  ---
                    <---------O2  <---------ANAC46                         <---------------AGL15 ---
       --------->MYB52(2)    <------MYB83    <-----------GT1              <-----------------AGL3 ---
---MYB52(1)    --------->MYB52(1) <---------ANAC58                        ==========================
 
gtccaacgcttagttgccaaacgacgtcgatttggtttcgtgtgtattttacttaaataggcctaaatcacaaatctcatataaatggaaagatatctac  10289200
         <---------YAB1
        <---------AHL20(2)
        <---------AHL20(1)
      <---------YAB1
    --------->ATHB51
    <--------HAHB4
    --------->YAB1
    <---------ICU4
   <---------YAB1
   --------->ICU4                                                         --------->ZAT18
------>ANAC46    --------------->AGL15                 <----------DOF2--------->ARR14(2)
------>ANAC58    <---------------AGL15               ---------->ID1   <---------ARR14(2)      ------
------>ANAC58 <-----------GT1 --------->ZAT6        <-----------GT1  <------ZmHOX2a(1) --------->YAB1
=================================MADS_MADS  <---------TOE2(3)<-----------RAV1(1)---------->DOF2  ---
 
aagcccattattatttttaactatttgtagttaagactaaaattgttaagttttttttctttttttgttggaggaattgcacaaaaagaataagaagtaa  10289300
                                                           ------->TEIL
                                                       <---------TOE2(3)
                    ------>ZmHOX2a(2)                 --------->YAB1
                   <------ZmHOX2a(2)                <---------YAB1
                  <---------AGP1                   --------->TOE2(3)            --------->ANAC55(2)<
           ----------->GT1                       <---------YAB1        ---------->DOF2             <
           <------MYB46(1)                      --------->ARR11(3) ------>ZmHOX2a(2)               <
           <------MYB83    <-----------GT1      <---------ARR11(3)<------ZmHOX2a(2)       <---------
--->MYB52(1)      --------->ARR11(3)           --------->CCA1(1) --------->ARR11(3)   <<<<<<<<<<GT-3b
-------->GT1      <---------ARR11(3)           --------->RVE1(1) <---------ARR11(3)------->TEIL   --
 
tggtttattgtatttggttaagatctcaattttctatgtagttagtcaaaatatcattaatgaatatagatcccaaaagttttatgtatttttcttttag  10289400
                                                                        <---------ANAC55(2)
                                                 <---------AHL20(2)     --------->ANAC55(2)
       <----------DOF2                          --------->AHL20(1)      <---------ANAC58
---------ANAC55(2)                              <---------AHL20(2)      <---------ANAC58
---------ANAC46                                 --------->AHL20(2)      <---------ANAC46
---------YAB1   --------->YAB1          >>>>>>>>>MYB2                   <---------ANAC55(1)
-DOF2  <---------DAG2    --------->ANAC46       <---------AHL20(1)<---------YAB1
------->MYB59   ----------->GT1 --------->MYB52(1)        --------->ANAC46
 
ttatgtatgacttttcgaatggtgatatacaaaacaaatggaaaaccaaaatataatgtatacaaaactctcattacgtttttttttgtttgtgttttgc  10289500
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AGI:  At3g27770.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14740.1)
Range:  from: 10286894    to: 10289012    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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