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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
<-------
GAMYB
<---------
YAB1
<---------
MYB46(3)
<---------
ARR11(3)
--------->
ANAC46
<---------
ANAC55(2)
--------->
ARR14(3)
<---------
ZAT18
--------->
ANAC55(2)
---------
-----
TEIL
--------->
ARR11(3)
--------->
AtLEC2
--------------->
AGL15
--------->
YAB1
-----
GLK1(2)
--------->
TOE2(3)
<---------
YAB1
--------->
ARR11(3)
---->
ARR14(2)
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
ZAT14
<--------
-----
ARR14(2)
<---------
ATHB12
<---------
YAB1
<---------
AtMYB61
<---------
ARR11(3)
----
ttcgttcaaaacaaggtctccaaacatcatcaatgcacaaaacatcattaccattaagtgatggttgagtttgaactgaactatcttcatacttccataa
10288600
-------->
ATHB1
--------->
ATHB12
<--------
ATHB1
--------->
YAB1
<---------
ICU4
<------------
ATHB5
--------->
ATHB51
<---------
YAB1
--------->
GLK1(1)
---------->
DOF2
--------->
ZAT6
---------->
DOF2
>
HSFB2a(2)
<---------
ATHB12
<-----------
GT1
--------->
YAB1
-
HSFB2a(2)
--------->
ICU4
<-----------
GT1
----------->
GT1
--------->
AHL20(2)
----------->
GT1
----->
ZAT6
--------->
WOX13(1)
---------->
DOF2
<---------
ATHB12
<---------
ZAT2
gactaataaagaaacaatcattggaactattacccatatagcacatagtaacactctccaattaaaccagtaatcaaagctggtgaattccaaaacattc
10288700
--------->
AGP1
--------->
ARR14(2)
<---------
ARR14(2)
<----------
DOF2
------>
ZmHOX2a(2)
<---------
RVE1(1)
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(1)
<---------
CCA1(2)
<---------
ARR14(1)
<---------
LBD16
--------->
KAN4(2)
------>
ZmHOX2a(2)
---------->
ID1
--------->
ARR14(2)
--------->
LBD16
--------->
LBD16
<---------
ANAC58
<---------
ARR14(2)
--------->
ANAC46
<---------
LBD16
<-----------
GT1
--------->
KAN4(1)
<------
ZmHOX2a(2)
--------->
MYB52(1)
<---------
AHL20(2)
<---------
KAN4(1)
--------->
CCA1(2)
<---------
ALFIN1
<-------
TEIL
<---------
ANAC58
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
tcaagattcat
tttttttttcttgttctcttgttgatccgtctgaatattcggatcttttagatccgaaactcaatgggatcaacaccggacttgaaaac
10288800
---------->
DOF2
----------->
GT1
<---------
YAB1
<---------
ZAT14
<---------
TOE2(3)
<---------
At4g35610
<---------
TOE1(3)
--------->
At4g35610
--------->
ARR11(3)
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
<---------
WOX13(1)
<---------
ZAT6
<
============================
HOX2a_HOX2a
--------->
ATHB12
<---------
YAB1
-
<---------
ARR11(3)
<---------
At4g35610
<---------
WOX13(1)
--------->
CCA1(2)
<-----
--------->
AGP1
--------->
ZAT14
--------->
At4g35610
<---------
ARR11(3)
<----------
DOF2
<-
ccagatcaaaaactgtct
ctgcagaggagttaaaagtagcttaattgatttacatatagagatattagtgttaagattaagtagctttgattcttgatac
10288900
--
----
<---------
YAB1
------>
ZmHOX2a(1)
--------->
CCA1(2)
<---------
MYB52(1)
---------->
ID1
----------->
GT1
<---------
ARR11(3)
---------
ANAC55(2)
<---------
ANAC58
----------->
HVH21
--------->
ARR11(3)
-------->
ANAC55(2)
<---------
ANAC58
<---------
ANAC46
----------->
ARR10
----
ICU4
--------->
HSFC1(2)
<---------
ANAC58
<------
MYB46(1)
<----
--------
TOE2(3)
<---------
HSFC1(2)
<---------
ANAC58
<------
MYB83
-----
ttac
gttatgttaagagaaatgtagaagcttgtccttgttcttgttgttgtgtgtgatggagaagtcaaattgaaacttggaaggtgatgagatatgaga
10289000
--------->
HSFC1(2)
--------->
HSFB2a(1)
<---------
HSFB2a(1)
<---------
HSFC1(2)
<---------
PCF2
<---------
ALFIN1
<---------
TGA1a
--------->
ZAT18
--------->
ZAT2
--------->
ALFIN1
--------->
O2
----------->
HVH21
<---------
ZAT2
<------
NtERF2
--------->
TGA1a
<---------
ANAC46
<---------
O2
<---------
DEAR3(1)
<-----------
RAV1(2)
*
TSS
<---------
DREB2C(2)
<------
ZmHOX2a(1)
--------->
GT1
------------>
CBF
--------->
PCF2
--------->
ANAC58
----->
CCA1(2)
<---------
KAN4(1)
<---------
At4g35610
<----------
ARF1
--------->
TCP15(1)
-----
ARR11(3)
--------->
KAN4(1)
--------->
At4g35610
--------->
ALFIN1
--------->
ALFIN1
---->
ARR11(3)
------------>
CBF
<-----------
HVH21
<---------
ZAT14
--------->
ANAC58
<------
tatgtataaatc
tgaagaacaatccaatggcggtgtcagaggcccactggaatcggagaacacagagtggagacaaggacaggtgggaccttctccgttt
10289100
--------->
ARR11(3)
<---------
ARR11(3)
<---------
GLK1(1)
--------->
RVE1(1)
<---------
CCA1(1)
--------->
GLK1(1)
--------->
AHL20(2)
<---------
RVE1(1)
--------------->
AGL15
--------->
CCA1(1)
<---------------
AGL15
--------->
ARR11(3)
===========================================
MADS_MADS
<---------
ANAC46
<---------
ARR11(3)
<---------
ANAC58
---------->
DOF2
<------
MYB46(1)
<-----------------
AGL1
<---------
AHL20(2)
--------->
O2
<---------
ANAC55(1)
--------->
AHL20(2)
---
<---------
O2
<---------
ANAC46
<---------------
AGL15
---
--------->
MYB52(2)
<------
MYB83
<-----------
GT1
<-----------------
AGL3
---
---
MYB52(1)
--------->
MYB52(1)
<---------
ANAC58
==========================
gtccaacgcttagttgccaaacgacgtcgatttggtttcgtgtgtattttacttaaataggcctaaatcacaaatctcatataaatggaaagatatctac
10289200
<---------
YAB1
<---------
AHL20(2)
<---------
AHL20(1)
<---------
YAB1
--------->
ATHB51
<--------
HAHB4
--------->
YAB1
<---------
ICU4
<---------
YAB1
--------->
ICU4
--------->
ZAT18
------>
ANAC46
--------------->
AGL15
<----------
DOF2
--------->
ARR14(2)
------>
ANAC58
<---------------
AGL15
---------->
ID1
<---------
ARR14(2)
------
------>
ANAC58
<-----------
GT1
--------->
ZAT6
<-----------
GT1
<------
ZmHOX2a(1)
--------->
YAB1
=================================
MADS_MADS
<---------
TOE2(3)
<-----------
RAV1(1)
---------->
DOF2
---
aagcccattattatttttaactatttgtagttaagactaaaattgttaagttttttttctttttttgttggaggaattgcacaaaaagaataagaagtaa
10289300
------->
TEIL
<---------
TOE2(3)
------>
ZmHOX2a(2)
--------->
YAB1
<------
ZmHOX2a(2)
<---------
YAB1
<---------
AGP1
--------->
TOE2(3)
--------->
ANAC55(2)
<
----------->
GT1
<---------
YAB1
---------->
DOF2
<
<------
MYB46(1)
--------->
ARR11(3)
------>
ZmHOX2a(2)
<
<------
MYB83
<-----------
GT1
<---------
ARR11(3)
<------
ZmHOX2a(2)
<---------
--->
MYB52(1)
--------->
ARR11(3)
--------->
CCA1(1)
--------->
ARR11(3)
<<<<<<<<<<
GT-3b
-------->
GT1
<---------
ARR11(3)
--------->
RVE1(1)
<---------
ARR11(3)
------->
TEIL
--
tggtttattgtatttggttaagatctcaattttctatgtagttagtcaaaatatcattaatgaatatagatcccaaaagttttatgtatttttcttttag
10289400
<---------
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC55(2)
<----------
DOF2
--------->
AHL20(1)
<---------
ANAC58
---------
ANAC55(2)
<---------
AHL20(2)
<---------
ANAC58
---------
ANAC46
--------->
AHL20(2)
<---------
ANAC46
---------
YAB1
--------->
YAB1
>>>>>>>>>
MYB2
<---------
ANAC55(1)
-
DOF2
<---------
DAG2
--------->
ANAC46
<---------
AHL20(1)
<---------
YAB1
------->
MYB59
----------->
GT1
--------->
MYB52(1)
--------->
ANAC46
ttatgtatgacttttcgaatggtgatatacaaaacaaatggaaaaccaaaatataatgtatacaaaactctcattacgtttttttttgtttgtgttttgc
10289500
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AGI:
At3g27770.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14740.1)
Range:
from: 10286894
to: 10289012
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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