Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->DOF5.7(1)                                      ---------->DOF2                                    ------>ZmHOX2a(2)                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  >>>>>>>>>GATA-1                                  <---------ARR11(3)         --------->ANAC58         >>>>>>>>>GATA-4         --------->ANAC58         --------->ARR11(3)        ------->GAMYB             >>>>>>>>>GATA-3       --------->MYB46(3)         --------->AGP1                 ------------------------>ANAC81  --------->TOE1(3)               >>>>>>>>>GATA-2              ------>MYB46(1)  --------->TOE2(3)               --------->GATA12             ------>MYB83  <---------AHL20(2) --------->YAB5                   <---------GATA12     <---------YAB1  --------->YAB1 ---------YAB5                   --------->GLK1(1)  --------->GLK1(2) <---------ATHB12 ---ANAC58                    --------->DOF5.7(1)  <---------GLK1(2)  <---------YAB5        <-------- ---ANAC58      <-------TEIL<---------ZAT14      ----------->ARR10  --------->WOX13(1)<---------KAN1- ---ANAC46 ------->GAMYB    ---------->DOF2 --------->YAB5   <---------MYB59 --------->AHL20(2)------   gaaacattaacaaccaagttcatatgggagtaaagagatctaaagatgaataagattcttataccaaattcaatcatattaaaacagagtatagctttaa  9987500                                                                                       --------->MYB46(3)                                                                                       --------->REM1(1)                      --------->At4g35610                                      --------->GLK1(2)                      ----------->RAV1(2)                                      --------->ARR14(2)                     ------->TEIL                                             <---------GATA12                <----------DOF2                                               --------->GATA12         --------->ATHB12                                                     <---------GLK1(2)         <--------HAHB4                                                       <---------RVE1(2)        <---------YAB5<---------At4g35610                                     <---------ARR14(2)  --------->TOE2(3)  --------->GATA12                                         --------->ARR14(2)  --------->TOE1(3)  <---------GATA12                                        <---------At4g35610 --DOF2 <---------ATHB12   <---------At4g35610                 ------>ZmHOX2a(1)     ----------->RAV1(1) ------>TEIL   <---------ANAC58                       <---------KAN1         --------->KAN1 ---->DOF2     <---------ANAC58      ------->TEIL   ----------->GT1         ----------->ARR10       <   agaaccttgaatcatttgctttgcatctgagatgctatgaaactgagataactcgagtaaaactcctccccatctagtcagattctgcaacaacaagaac  9987600                                                                  ------->TEIL                                                                  <---------ARR14(2)                 <---------DOF5.7(1)                              --------->GLK1(2)                <---------MYB52(1)                                <---------GATA12             <-------TEIL                                         --------->GATA12            --------->ARR14(1)                                    --------->ARR14(2)           <---------GLK1(2)                                     <---------GLK1(2)           --------->ARR11(1)                           --------->GATA12           --------->ARR14(2)                      <---------GATA12           <---------ARR14(2)                     --------->GLK1(1)          --------->KAN1                          <---------GLK1(1)        --------->YAB5         --------->DOF5.7(1)              ---------->DOF2<------ZmHOX2a(2) <---------ICU4       ---------->DOF2                 --------->YAB1   --------->RVE1(2)  --------->YAB1  --------->RVE1(2)     <----------DOF2--------->YAB5   <---------GATA12  <---------ATHB12     ------ ---------AHL12(1)   <-----------GT1  <---------KAN1<------ZmHOX2a(2)     --------->ICU4     <-------   aaaaaatcaaaaagattcgtttttttctttctgccatcgaatcacaaagcagagatcagatcgaactgaatctgaaatcatgaaatgaagagaaaactaa  9987700                                                                                                <----                                                                                                <----                                                                                        <---------ARR11(2)                                                                                        --------->ARR11(2)                                                                                        <---------ARR14(2)                                                                                        <---------ARR11(1)                         <------MYB83                                                   --------->RVE1(2)                   <---------ANAC46                                                     --------->ARR14(2)                   <---------ANAC58                                                    <---------CCA1(2)                   <---------ANAC58                                               --------->ARR14(2)             <---------ARR14(2)       <------NtERF2                  ------>ZmHOX2a(1)--------->LBD16             --------->ARR14(2)      ------>NtERF2               --------->ARR14(2)  <---------ANAC58        ---------->DOF2<--------P  ---------->ID1                <---------ARR11(2)  <---------ANAC58     <---------At4g35610 <------MYB46(1)                         --------->ARR11(2)  <---------ANAC55(2)     --------->At4g35610<---------TOE1(2)       <---------KAN1   <---------ARR14(2)  --------->ANAC55(2) --->MYB52(1)<---------GATA12     <---------RAP2.3(1)     <---------KAN1          --------->ARR11(2)- --MYB52(2) <------ZmHOX2a(1)--------->KAN1    ------->TEIL   --------->YAB1      <---------ARR11(2)<   catcggcatctaaaggatttgacttgtaggtattttcggcgtcttgacgaatttgttcgaacaatagtatcctatcgaactcagtttccgtatccatggc  9987800                                                                                 <------NtERF2                                                                                ------------>CBF                                                                                ------>NtERF2                                                                              --------->RRTF1(1)                                                                              --------->RAP2.3(1)                                                                             --------->LBD16                                                                           --------->DEAR3(2)                                                                         --------->CCA1(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                  <---------ANAC58                                 --------->RVE1(2)                  <---------ANAC46                                *TSS  --------->ARR11(2)                  <---------ANAC58                              --------->AHL20(3)       --------->ANAC58       <----------DOF2             <----------DOF2              <---------AHL20(3)       --------->ANAC46  ---------->DOF2--------------->AtSPL3                         <---------AHL12(2)       --------->ANAC58 -----ANAC58   <----------DOF2     <---------DOF5.7(1)          --------->AHL12(2)  <---------ATHB12 -----ANAC58  <---------DOF5.7(1) <---------ANAC58         ----------->GT1--------->MYB52(1) -------->HSFB2a(2)               <---------ANAC58     <------NtERF2    <---------ARR11(2)       <--- ---------HSFB2a(2)         <----------DOF2          --------->ANAC46  --------->At4g35610   <------NtERF2   ttctcaaagcttttcttctttcgtacaaaacttttggcttttcttctctcagacctcggcacagataaaaatcagataccggcgcaatgaaacgcagcgt  9987900                                 --------------->AGL15                                 ====================================================================                                <---------ANAC58                                <---------ANAC46                                  <-------TEIL                                <---------ANAC58                       --------->ICU4                                <---------ANAC55(1)     <---------ALFIN1<---------ICU4            ------------>CBF   --------->MYB52(2)       --------->MYB52(1)   <--------P       <------      --------->ZAT18        <<<<<<<<<MYB98      ---------->DOF2 --------->WOX13(2)           <------      <---------ZAT18      <---------YAB1        --------->DOF5.7(1)   <---------YAB1         <------ ------DOF5.7(1)         --------->YAB1     ----------->GT1      <---------WOX13(2)  --------->AtLEC2   ttttttagtgggcttacaatgggcctattatgttacttgtattagtttgtaaaaagcccaacgtcttaatttcatgatggtaagtccattcaaatggctt  9988000                                                                 --------->AHL20(3)                                                                 --------->AHL12(3)                                                                 <---------AHL20(3)                                                               <---------AHL20(2)                                                               --------->AHL12(3)                                                               --------->AHL25(1)                                                              <---------ARR11(3)                                                              <---------AHL20(1)                                                              --------->AHL25(3)                                                        <-----------GT1                                                      --------->KAN1                                                     --------->AHL20(3)                                                     <---------AHL25(1)                                                     <---------AHL12(2)                                                     <---------AHL20(2)                                                     <---------AHL20(3)                                                     <---------AHL20(1)                                                     <---------AHL25(3)                                                    --------->AHL20(2)                                                    --------->AHL12(1)                                                    <---------AHL12(1)                                                    --------->YAB1                                                    <---------AHL20(2)       --------->KAN1                                                    --------->AHL25(3)      <---------AHL20(2)                                                    <---------AHL25(3)      <---------AHL20(3)      --------->YAB1                                <---------AHL25(1)      <---------AHL25(1)  --------------->AGL15                             --------->AHL25(1)      --------->AHL25(2)  <---------------AGL15                             <---------AHL12(3)      --------->AHL25(1) ----------------->AGL2                             --------->AHL12(3)      <---------AHL25(2) ----------------->AGL3                           <---------AHL20(3)        --------->AHL20(3) <-----------------AGL3                     --------->YAB5   <---------CCA1(2)         --------->RVE1(2) <-----------------AGL2              --------->ANAC58<---------AHL25(2)  <---------GLK1(2)   -------- =================MADS_MADS          --------->ANAC58--------->AHL25(2)  <---------GATA12    <------- ---ANAC58                   <---------GLK1(1)    --------->AHL25(2)     --------->GATA12--------->YAB5 ---ANAC58                   --------->GLK1(1)    --------->AHL20(3)  --------->YAB1  <---------ICU4 ---ANAC46  <---------WOX13(1)      --------->RVE1(2)--------->AHL20(1)  <---------RVE1(2) <---------YAB1   gtttccattaatagattgacatataacttggagttccatacccaaatgacaaaattatattccatatatttatcagattttattctaaaaatcactatag  9988100                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                 ------->TEIL                                                                    <---              <---------YAB1                                                                     ----              <---------YAB5                                                                     <---             <---------TOE2(3)                                                                   ----          <---------AHL20(2)                                                                     <---          --------->AHL20(3)                                            ----------->GT1          <---          <---------AHL20(3)                                           ------->MYC3              ----       --------->AHL20(1)                                              <-------MYC3              <---       <---------AHL20(1)                                           ----------->RAV1(1)          ----      --------->AHL12(2)                                          ------>MYB46(1)               -----      <---------AHL12(2)                                          ------>MYB83                  <----      <---------AHL12(3)                                          <-----------HVH21             <----      --------->AHL12(3)                  <---------ANAC58       --------->ANAC46     --------->CCA1(2)     --------->ARR11(3)                   <---------ANAC58     =================RAV  <---------ARR11(2)     <---------ARR11(3)                  --------->ZAT2        --------->At4g35610   --------->ARR11(2)     <---------AHL20(1)                  <---------ZAT2        ----------->RAV1(2)   --------->ARR14(2)    <---------KAN1    --------->MYB52(2) --------->At4g35610   <---------At4g35610   <---------RVE1(2) ->ZAT14 --------->AHL12(2)              <---------At4g35610   --------->ZAT2        <---------ARR14(2) --ZAT14 <---------AHL12(2)      <---------RVE1(2)             <---------ZAT2 --------->RVE1(2) -----   ttttgaatatatattaatgaatgttagtcacaagtgatatgtgagcttgcaatgtgactaatctcacctgccacatgtaaaatcacagatatgaaacaat  9988200           <---------AHL20(2)           <---------AHL25(1)         <---------AHL12(2)         --------->AHL12(2)        <---------AHL25(3)        <---------AHL20(2)       --------->AHL20(2)       --------->AHL25(3)       <---------AHL20(2)      <---------YAB1   <---------YAB1  --------->AHL12(2)  <---------AHL12(2) <---------AHL25(3) ---------AHL25(3) ---------AHL12(1) -------->AHL25(3) -------->AHL25(2) ---------AHL25(1) -------->AHL25(1) -------->AHL20(3) ---------AHL20(3) ---------AHL25(2) -------->AHL20(1) -------->AHL12(1) ---------AHL20(2) -------->AHL20(2) ---------AHL20(1) --------AHL12(2) ------->AHL12(2) ------>AHL12(2) -------AHL12(2) ----->AHL20(2) ----->AHL25(1) ------ICU4--------->AHL12(1) ------AHL20(2) ----->AHL25(2) ------AHL25(2) ----->ATHB51                                                                       <-----------RAV1(1) -----ATHB1<---------AHL12(1)                                                  <---------DOF5.7(1) ------AHL25(3)                           --------->DOF5.7(1)          --------->KAN1 ----->AHL20(3)                           --------->DAG2              --------->ARR11(3) ------AHL12(1)                          --------->DAG2               <---------ARR11(3) ----->AHL12(1)                          --------->DOF5.7(1)        <---------TOE2(3)       <-------- ---->AHL25(3)            --------->CCA1(2)                    <------ZmHOX2a(1)   <---------YAB1 -----ATHB51        --------->DOF5.7(1) ---------->DOF2  ---------->DOF2      <----------DOF2 -----ATHB12      ---------->DOF2       --------->DOF5.7(1)--------->DOF5.7(1)<---------DOF5.7(1) ---->ICU4--------->AHL25(3)--------->DOF5.7(1)      <---------ANAC55(2)     <---------DOF5.7(1)   aatttattattaaatatttgtaaagaagataagaggtttgcaaaaaggtagcatcacatgaaagaggattaagatgttcccttttattgttgttcttttt  9988300                                                                                                -----                                                                                                -----                                                                                                -----                                                                                             --------                                                                                           --------->TOE2(3)                                     --------->ANAC58                              --------->AHL20(3)                                     --------->ANAC58                              <---------AHL12(3)                             --------->AHL20(2)                                    <---------AHL20(3)               <----------DOF2     ---------->DOF2              --------->ARR11(3)<---------AHL25(2)            <---------YAB1   <---------AHL20(2)               --------->DOF5.7(1) --------->AHL12(1)   <---------ANAC58          --------->AHL25(1)             --------->YAB1        <---------AHL12(1)   <---------ANAC46        <---------WOX13(2)               ---------->DOF2      <---------RVE1(1)  <   <---------ANAC58        --------->WOX13(2)            --------->YAB1         <---------RVE1(2)  -- <---------ANAC46      ------------------------>ANAC81  <---------YAB1  <---------KAN1    --------->YAB1 --DOF2   --------->KAN1  --------->YAB5          ----------->GT1      --------->RVE1(2) >>>>>>>>>MYB98   gttttgtgtgtgttattctttgaagaaacaattaaacaaaagccaaattgtatagtttataataaagatgtcgaatcaaactgatatttttaacataaac  9988400  Previous    Next  AGI:  At3g27080.1    Description:  TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3); P-P-bond-hydrolysis-driven protein transmembrane transporter. Identical to Mitochondrial import receptor subunit TOM20-3 (TOM20-3) [Arabidopsis Thaliana] (GB:P82874;GB:Q9LSC8); similar to TOM20-1 (TRANSLOCASE OUTER MEMBRANE 20-1) [Arabidopsis thaliana] (TAIR:AT3G27070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49013.1); contains InterPro domain Plant specific mitochondrial import receptor subunit TOM20; (InterPro:IPR010547) Range:  from: 9986316    to: 9987866    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
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