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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
LBD16
<---------
ANAC46
<---------
ANAC58
--------->
ALFIN1
--------->
ALFIN1
<-------
PIF5
------->
MYC3
<-------
MYC4
<-------
PIF5
------->
PIF5
<-------
MYC3
------->
MYC4
<-------
PIF4
<-------
PIF4
------->
PIF4
<-------
MYC2
--------->
TOE1(2)
------->
MYC2
------->
MYC2
------->
MYC3
<-------
MYC2
<-------
MYC3
------->
PIF5
------->
PIF4
<-------
MYC4
<---------
TGA1a
------->
MYC4
<---------
O2
--------->
PIF3(3)
--------->
O2
=======================================
--------->
TGA1a
<---------
PIF3(3)
--------->
At4g35610
--------->
TGA1a
<---------
ARR11(3)
--------->
ALFIN1
=============================
bZIP_DOF
--------->
O2
---------->
DOF2
------------>
OsbHLH66
<---------
O2
----------->
GT1
--------->
ARR11(3)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
----------->
GT1
<---------
ZAT14
<---------
ANAC58
<---------
TGA1a
<------
NtERF2
----------
----------->
GT1
--------->
ZAT14
<---------
LBD16
------------>
OsbHLH66
<------
ZmHOX2a(1)
------------------------>
ANAC81
<------------
OsbHLH66
---------------->
PIF3(2)
<------
ZmHOX2a(1)
gagagagagagggaaaatagtaaaaaagagtgaagagcttac
acgtgcggggagaggagttggcacgtgggaaataggaggcataggaggagggaaagag
9856800
------>
ZmHOX2a(2)
==========================
HOX2a_HOX2a
<---
===========================
HOX2a_HOX2a
----
--------->
ARR11(3)
<----
<---------
ARR14(3)
<-----
--------->
ARR14(3)
------
<-----------
ARR10
<---------
ATHB12
<---------
ARR11(3)
--------->
ICU4
--------->
ARR14(2)
<------
NtERF2
-------
---------->
DOF2
<------
ZmHOX2a(2)
------>
NtERF2
<---------
ICU4
----------->
GT1
<---------
ARR14(2)
--------->
ANAC46
<-------
=
bZIP_DOF
>>>>>>>>>
TBF1
--------->
DEAR3(1)
--------
>
DOF2
<---------
TOE2(3)
------>
ZmHOX2a(1)
--------->
ZAT6
--------->
DEAR3(2)
--------->
YAB1
agaaggttaaaggaagaagaagatcgtctctgtctaggcatccttctcttcttccagttaacaccaagaagaggcacagacgccgataacccatgatgat
9856900
--------->
ARR14(2)
<---------
ARR14(2)
----------->
HVH21
<---------
ETT(1)
--------->
MYB46(3)
--------->
DEAR3(2)
------
ICU4
<---------
ICU4
----->
YAB1
<---------
ATHB12
<--------
HAHB4
-----
YAB1
<---------
ARR14(2)
<---------
YAB1
----
ARR11(3)
------>
ZmHOX2a(2)
------->
GAMYB
--->
ARR11(3)
<------
ZmHOX2a(2)
<---------
TOE2(3)
--------->
YAB1
-->
YAB1
--------->
ARR14(2)
--------->
ZAT14
--------->
MYB46(3)
--
YAB1
--------->
LBD16
<---------
ALFIN1
-------->
P
<-----------
GT1
->
ICU4
<---------
LBD16
--------->
ICU4
---------->
DOF2
--------->
MYB46(3)
----
catgacccgacccggatccaaacccatgatcaacacttgccactaaagtagaggccttggtttccacattttcatcaaccatcat
ttttctctctcaatt
9857000
<----------
DOF2
------>
ZmHOX2a(2)
--------->
GLK1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
ARR11(3)
----------->
GT1
<---------
AGP1
----------->
GT1
--------->
ALFIN1
----------->
GT1
<---------
MYB46(3)
--------->
ZAT6
--------->
ALFIN1
<---------
ZAT14
<----------
ID1
<---------
GLK1(1)
<----
------->
GT1
---------->
DOF2
--------->
ZAT14
---------->
DOF2
<---------
CCA1(2)
<---------
ZAT6
ggttaacactgcctagtaaaaaggaagtgtggaagaaaacagttctctgtgtgaaggaaaaaagaacaaatggtggatctctttgggtttcagtgataga
9857100
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<------
ZmHOX2a(2)
<---------
ANAC46
--------->
ARR14(2)
<-----------
RAV1(1)
<---------
ZAT18
<---------
ANAC46
<---------
ANAC46
<-----------
RAV1(1)
<---------
ANAC46
<---------
ANAC46
<---------
ZAT14
<---------
ANAC58
<-------
GAMYB
---------->
DOF2
<---------
MYB46(3)
<-----------
RAV1(1)
---------
-----
ZAT6
---------->
DOF2
<---------
ANAC58
------->
TEIL
<---------
ARR14(2)
gatagagagagaaagagaagatagatagagagagaaagagagactgtggtttgtgttgtgttgtgtgtatgtgtgttgtgcagatcgaaacagaggctta
9857200
----------->
HVH21
----------->
GT1
--------->
ANAC58
<-----------------
AGL2
----------------->
AGL3
--------->
ATHB12
--------->
ANAC58
<---------
ICU4
--------------->
AGL15
<---------
ATHB12
<---------
TOE1(3)
--------->
ICU4
<-----------------
AGL3
<---------
TOE2(3)
<---------
TOE2(3)
--------->
YAB1
----------------->
AGL2
--------->
CCA1(2)
<---------
AHL20(2)
<---------------
AGL15
--------->
YAB1
<---------
MYB52(1)
<-----------------
AGL1
--
<---------
ATHB12
<------------
CBF
<-----------
GT1
<------
ZmHOX2a(1)
<--
<---------
DEAR3(1)
*
TSS
--------->
ATHB12
<---------
YAB1
<---------
YAB1
------>
MYB83
-->
GT1
--------->
WOX13(1)
<---------
YAB1
<---------
YAB1
<-----------------
AG
------>
MYB46(1)
aaatggacgctgggcaatcagagatt
tgggtttaccattggtttttaatgatttttgttttactatttatggtaaggaagtgacatttgtataacctaca
9857300
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
--------->
AGP1
<-----------
ARR10
<---------
ARR14(2)
--------->
ANAC58
<---------
ARR11(3)
--------->
YAB1
<---------
AGP1
<---------
ARR11(3)
<---------
YAB1
--------->
ARR14(2)
--------->
ARR11(3)
--------->
YAB1
--------->
ARR11(3)
----
<---------
GLK1(2)
<---------
YAB1
--------->
ANAC58
----
<---------
YAB1
<---------
YAB1
<---------
YAB1
<---------
ARR11(3)
----
----------->
ARR10
<---------
YAB1
--------->
ANAC46
------
------->
TEIL
<---------
TOE2(3)
<---------
TOE2(3)
--------->
ANAC55(2)
<---------
MYB52(2)
------->
YAB1
--------->
HSFB2a(2)
--------->
ARR11(3)
--------->
ICU4
----------->
RAV1(1)
<---------
ZAT14
-----
TEIL
<---------
HSFB2a(2)
<---------
CCA1(2)
--------->
YAB1
<---------
ANAC55(2)
--------->
ZAT14
ttcatgaatctagggttttggaagattaagattttctaaatcttgataagattattatgatgatagtaacgcaacaagatctaatgccactaaactaaca
9857400
<---------
TOE2(3)
<---------
TOE1(3)
---------->
DOF2
<---------
DOF5.7(2)
<------
MYB46(1)
----------->
GT1
<------
MYB83
--------->
YAB1
--------->
MYB59
--------->
TOE2(3)
--------->
MYB46(2)
<---------
ANAC58
<-----
--------->
MYB46(3)
<---------
MYB52(1)
<---------
ANAC46
--------->
ARR14(2)
----->
ANAC46
<------
MYB46(1)
<---------
ANAC58
<---------
ARR14(2)
----->
ANAC58
<------
MYB83
<----------
ID1
--------->
ALFIN1
----->
ANAC58
<---------
TOE2(3)
--------->
MYB52(1)
<---------
REM1(1)
<
--->
ZAT6
--------->
MYB59
---------->
DOF2
<---------
AtLEC2
---------->
DOF2
ctcaaccatagtttagagattaggttaggttaaagtttagaaccaagagcaaagggacgagtggattgtgcatggtgaacaagtgtagcaaaagttctgc
9857500
<---------
RAP2.6(2)
--------->
LBD16
--------->
ANAC55(2)
--------->
HSFB2a(2)
<---------
ANAC58
--------->
HSFC1(1)
<---------
ANAC58
<---------
HSFB2a(2)
<---------
ANAC55(2)
<---------
LBD16
<------
NtERF2
--------->
ZAT6
<-----------
GT1
<---------
ANAC58
<---------
ZAT6
<-----------
GT1
<----
<----------
DOF2
<---------
ANAC58
--------->
ZAT6
<-----------
GT1
<----
----
At4g35610
<---------
ANAC46
<-----------
GT1
--------->
AHL20(2)
<----
----------
DOF2
--------->
GLK1(1)
<---------
ALFIN1
---------->
DOF2
<---------
YAB1
------
ttctttccttttttccagaattcaatggcgtcttcttctctctctctaccacatttaactctagttttaaagtcaatttaactctcattacttactggtc
9857600
<---------
GLK1(2)
----------->
ARR10
<---------
TOE2(2)
----------->
GT1
<---------
ANAC46
--------->
TOE1(2)
-----
WRKY12
<---------
ARR14(2)
<---------
DAG2
<----------
DOF2
-----
WRKY38(1)
--------->
ANAC46
<---------
DAG2
-----
WRKY45
--------->
ARR14(2)
<----------
DOF2
---------->
DOF2
--->
WRKY18(1)
<-------
TEIL
--------->
ANAC46
---------->
DOF2
--------->
YAB1
aacatgtgatttgtatatacgtagattctacgacttttttttagggataaagaacatttttgcgaccaagaataaaggctttttgtttctacagacttag
9857700
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AGI:
At3g26790.1
Description:
FUS3 (FUSCA 3); DNA binding / transcription factor. similar to ABI3 (ABA INSENSITIVE 3), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT3G24650.1); similar to Transcriptional factor B3 [Medicago truncatula] (GB:ABD32571.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340)
Range:
from: 9855065
to: 9857226
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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