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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                      <------ZmHOX2a(1)
                                                --------->YAB1
                                               <---------YAB1
                                             <---------ICU4
                     <---------ZAT2       --------->YAB1
                     --------->At4g35610  <---------ICU4
                     <---------At4g35610 <---------ATHB12    --------->ANAC58
                     --------->ZAT2      --------->ICU4      --------->ANAC58
       <---------ARR11(3)  ------>ZmHOX2a(1) --------->YAB1 --------->DAG2
       --------->ARR11(3) --------->TOE2(3) --------->ICU4 ---------->DOF2             <---------At4g35610
   ---------->DOF2 <---------ZAT18<----------DOF2    ----------->GT1                   --------->At4g35610
 
ctactgaaaagttcttgaacagcgagcttccttacttctttccaataatcatcataaggagaaaaagcaatgtctagatagttgtaagagagctctcttg  9641700
                                 --------->ARR11(3)
                  <-------TEIL   <---------ARR11(3)
                 --------->CCA1(2)
        --------->ATHB12    <-------TEIL          <-------TEIL                        <-------------
       --------->ICU4      --------->CCA1(2)     --------->CCA1(2)              <---------YAB1  ----
       <---------YAB1 ---------->DOF2      <-------TEIL                    ----------->GT1   -------
 ---------->DOF2<---------ARR11(3)        --------->CCA1(2)              ---------->DOF2    --------
 
cccctaaagaatgattcaagatacaaaaagattcaagatttcaagattcaagattcaagggtttgaacagagaaaccaaagttaaaattgtagtacctgc  9641800
                                                                           <-------GAMYB
                                                                          <---------MYB46(3)
                                                                          <-----------RAV1(1)
--AtSPL8                                <---------ANAC58    <------ZmHOX2a(1) <------MYB83
------>DOF2                         ---------->DOF2      --------->At4g35610  <------MYB46(1)    ---
-->AtLEC2              <-----------HVH21<---------ANAC58 <---------At4g35610 --------------->AtSPL8
->TOE1(2)   --------->REM1(1) <---------GLK1(2)      <-----------HVH21<---------YAB1         <------
 
aaagcctggacgactacaacaatggaggtcatggattttcaaagcttgttttgctgtttcagaggaagaaactatgactgttggtactcttccaagcttt  9641900
                                                                               --------->ATHB12
                                                                               --------->YAB1    <--
                                                                              <---------YAB1     ---
                                                                            <---------At4g35610 <---
  <-----------HVH21                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<------ZmHOX2a(1)
------->DOF2     <---------DAG2                ----------->GT1        --------->HSFC1(2)     <------ZmHOX2a(1)
----DOF2         <----------DOF2        <---------WOX13(1)            <---------HSFC1(2)  <---------
 
aaaagcatcacagggccatactttttggagagtttccatagagattgatgtggtaattctccgagttgatgcaagtttccgatgataggacagccaggag  9642000
            <---------MYB52(1)
           <---------At4g35610
           <-------GAMYB
    <---------MYB46(3)
    --------->ABI4(2)
   <---------DEAR3(1)               <-------GAMYB
   --------->ALFIN1                <---------MYB46(3)                             --------->ANAC58
   <---------AtMYB61       <---------GLK1(2)--------->ANAC58                      --------->ANAC58
<---------DEAR3(1)     ------>ZmHOX2a(1)    --------->ANAC58                    --------->At4g35610
-------ARR14(2)  <---------ICU4   <---------AtMYB61                        ----------->HVH21
-------->HVH21  <---------YAB1<---------ANAC58                           <---------ANAC55(2)
---ZmHOX2a(1) --------->YAB1  <---------ANAC58                           --------->ANAC55(2)
--RAV1(2) <---------MYB46(3)--------->GLK1(2)                 ----------->HVH21 <---------At4g35610
 
gagacggtggtgtccgttgataattcctccgattcttgtggttgaacacggctacaagaatacaaatgacgaagataagtgacagaagccaaatgtttgt  9642100
                                                                                         -----------
                                                                                  <---------YAB1
                                                                                <---------ICU4
                                                                                --------->YAB1
                                                                               --------->ICU4
                                                                               <---------YAB1
                                                                             --------->ATHB51
                                                                             <---------ICU4       <-
                      --------->ALFIN1                                       -------->ATHB1     <---
                  ---------->DOF2                                            <--------HAHB4     ----
                 --------->YAB1                                              --------->YAB1     ----
            ------------>CBF                                                <---------ATHB51  <-----
         <------------CBF                                               ------------>CBF<-----------GT1
       --------->AHL20(2)                                        <---------At4g35610--------->ARR11(3)
       <---------AHL20(2)                <----------DOF2   <------------CBF --------->ICU4    <-----
      --------->AHL20(2)           <---------ZAT14   <---------------AtSPL8 <---------ATHB12  ------
  <---------YAB1 --------->AHL20(2)--------->ZAT14<---------YAB1 --------->At4g35610<---------ARR11(3)
 
catttctgatttaattgcaattaaagtggctccataagtgtagtctttatattatactagtacattgctgctctcttcaattattattatcttacaatat  9642200
                       --------->DOF5.7(2)
                      --------->TOE2(3)
                      --------->TOE1(3)
                     ----------->GT1
           <---------------AtSPL3
          --------------------->WRI1
         --------->ANAC55(2)
         <---------ANAC55(2)
         <---------ANAC46
     --------->At4g35610                           <-----------GT1
->CBF<---------At4g35610    --------->TOE2(3)    --------->CCA1(2)
--------GLK1(2)    --------->MYB52(1)           --------->ARR11(3)
------ARR11(3)  --------->ANAC58                <---------ARR11(3)                               <--
----->AHL20(1)  --------->ANAC46  --------->AHL20(2)               ---------->DOF2            ------
----->ARR11(3)  --------->ANAC55(1)       --------->YAB1   <---------TOE1(3)                 <------
----ARR11(3)    <---------ANAC55(2)      <-------TEIL      <---------TOE2(3)                 -------
----AHL20(1)    --------->ANAC55(2)<---------AHL20(2) <---------DAG2                       ---------
--->AHL20(1)    --------->ANAC58  <---------AHL20(2)  <----------DOF2----------->GT1  ----------->RAV1(1)
 
atattctctgctacgtagtacgtaacgttaaacttaattttatattcataagatatactttttaggtttgaaaagtcaaacaagaacaacaacataaccg  9642300
                                  ------>ZmHOX2a(2)
                                  ==============================HOX2a_HOX2a
                                 <------ZmHOX2a(2)
                                 ===============================HOX2a_HOX2a
                                --------->ARR11(3)
                                <---------ARR14(3)
                                --------->ARR14(3)
                                <-----------ARR10
                                <---------ARR11(3)
                              --------->ANAC58                                             ---------
            <---------At4g35610 <---------ARR14(2)                                         <--------
     <---------YAB1           --------->ANAC58                                             <--------
  <---------YAB1          ------->GAMYB                                                    ---------
-------ETT(2)             --------->AtMYB61                                              <------ZmHOX2a(1)
->GAMYB <-----------HVH21--------->MYB46(3)                                           <-----------RAV1(2)
------AtMYB77       --------->TOE2(3)    <---------CCA1(2)           <---------ANAC58 <---------HSFB2a(2)
-->MYB46(3) --------->At4g35610 --------->ARR14(2)                   <---------ANAC58 <---------LBD16
>MYB52(1)   <---------ZAT2<---------ALFIN1               <------ZmHOX2a(1)  <---------At5g28300    <
 
tcgatatgatgagtcagctctaatctcaaccacacgatcttctcatctctggcacaagtaggagctcgtttttcttgtttacagtgagtccaggagcttc  9642400
        <---------ARR11(3)
        --------->ARR11(3)
       <---------GLK1(1)
       <---------CCA1(2)
 =====================bZIP_DOF
 ========================================MYC_MYB
 --------->TGA1a                  --------->HSFC1(2)
 <---------TGA1a                <--------P
 --------->ANAC46             ----------->GT1
 --------->bZIP60(2)   ------>NtERF2
 <---------O2         --------->ANAC46
 --------->O2         --------->ANAC58                                         <---------ATHB12
>HSFC1(2)             --------->ANAC58       --------->ICU4                    --------->MYB46(3)
-HSFB2a(1)          <---------ALFIN1       --------->YAB1               ------>MYB46(1)
-HSFC1(2)  --------->TOE2(3) <---------HSFB2a(2)                        ------>MYB83
>HSFB2a(1) <----------DOF2   --------->HSFB2a(2)   --------->CCA1(2)  --------->AtMYB61
---------ALFIN1 --------->MYB46(3)<---------HSFC1(2)                  <---------MYB59            ---
 
ttccacgtcgatatctttaacctccacgccttctggtaacttccagtcaaaatgatacaagagattagctagaccaaactcaaccattgttgtccccatg  9642500
                           <---------ALFIN1
                         ------>NtERF2
                        --------->RAP2.3(2)
                        <-----------------AGL1
                        --------->RAP2.3(3)
                      --------->ABI4(1)
                      <---------ATERF1(1)
                     --------->DEAR3(1)
                     --------->AtMYB61
                     ------->GAMYB
                     --------->RAP2.6(2)
                     <---------ATERF1(1)
                    --------->DEAR3(2)
                    --------->MYB46(3)
                    --------->SPL7
                  ------>NtERF2
                 ----------->HVH21
                 <---------ETT(1)
                 --------->DEAR3(1)    <---------At4g35610                                --------->LBD16
            --------->GLK1(2)    --------->At5g28300                                     --------->LBD16
           <---------ARR14(2)    --------->DOF5.7(2)   ------>ZmHOX2a(1)                <---------LBD16
           <---------GLK1(2)    ----------->GT1        <----------DOF2         ---------->DOF2
           --------->ARR14(2)--------->MYB52(1)     ---------->ID1       <-----------GT1<---------HSFB2a(2)
      <------ZmHOX2a(1) --------->DEAR3(1)     <-----------RAV1(1)     <---------YAB1  <---------LBD16
---->TEIL----------->ARR10<------NtERF2--------->At4g35610  <---------AtLEC2--------->TOE2(3)    <--
 
tatattgcaggacagattctccgaccgcccccaaacggtaacagctcaaaatgttgtccttttgcatcaatgttattatccataaacctctccgggagaa  9642600
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AGI:  At3g26300.1   
Description:  CYP71B34 (cytochrome P450, family 71, subfamily B, polypeptide 34); oxygen binding. Identical to Cytochrome P450 71B34 (CYP71B34) [Arabidopsis Thaliana] (GB:Q9LIP6); similar to CYP71B35 (cytochrome P450, family 71, subfamily B, polypeptide 35), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26310.1); similar to CYP71B37 (cytochrome P450, family 71, subfamily B, polypeptide 37), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26330.1); similar to CYP71B26 (cytochrome P450, family 71, subfamily B, polypeptide 26), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60733.1); simila
Range:  from: 9640436    to: 9642103    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g26310.1   
Description:  CYP71B35 (cytochrome P450, family 71, subfamily B, polypeptide 35); oxygen binding. Identical to Cytochrome P450 71B35 (CYP71B35) [Arabidopsis Thaliana] (GB:Q9LIP5;GB:Q53XE2); similar to CYP71B34 (cytochrome P450, family 71, subfamily B, polypeptide 34), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26300.1); similar to CYP71B37 (cytochrome P450, family 71, subfamily B, polypeptide 37), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26330.1); similar to CYP71B26 (cytochrome P450, family 71, subfamily B, polypeptide 26), oxygen binding [Arabidopsis thaliana] (TAIR:AT3G26290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO424
Range:  from: 9642326    to: 9644016    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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