Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                 ----                              <---------AHL20(2)                                                <----                              --------->AHL20(2)                                              <------                             --------->AHL20(2)  <----------ID1                            --------->GLK1(2)                   --------->TOE1(2)   ----------->GT1                                    <---------GLK1(2)                  --------->YAB1       <----------ID1                                     --------->ARR11(3)       ------->TEIL--------->TOE2(2)  ----------->GT1    --------->GLK1(2)          <---------ATHB12   ttcatcatgtatgtaatctaacataagaaaaattaataagagggaaaaaatgagacgagcttctgtcattgtttcaacttgttcaaatcaaagattctga  9529600       <------MYB46(1)                                                        ------>ZmHOX2a(1)       <------MYB83           ------>ZmHOX2a(1)                               ======================HOX2a_HOX2a      <---------AtMYB61      --------->TOE2(3)                           <---------At4g35610  --------->ATHB12 --------->MYB52(2)                                 ---------->DOF2 ------->YAB1      --------->MYB59                               <---------ARR14(3) --->TEIL        <---------MYB52(1)                              <---------ARR11(3)          <------ZmHOX2a(2) -----CCA1(2)<---------At4g35610                --------->ANAC58 --------->ARR14(3)         <-------- ---YAB1<-------GAMYB       --------->YAB1      --------->ANAC58 --------->ARR11(3)         ---------   atcttgatttggttgagcagttagttccaatcctaaactatgtgatgctcaagcagtacaacaagaagaccttgaagctcctcaaaaatgcttagatcat  9529700                                                                                          ------->TEIL        --------->ARR11(3)                                                             <---------YAB1        <---------ARR11(3)                                                         <---------WOX13(1)       <---------CCA1(2)     <----------DOF2                                   <---------MYB52(1) -ARR11(3)            <----------DOF2                      <---------ARR11(3) <-------GAMYB >ARR11(3)        <<<<<<<<<<GT-3b   --------->YAB1       ----------->HVH21   <-----------RAV1(1)   --   tttctctctatatctcatatttttctttcatctttcattcatgtctcatgtctggttccatgacctttctacattgtttctgttgatttatgaatcttca  9529800                                                             --------->LBD16       ---------->DOF2                                           ----------->GT1  ------->GAMYB         <---------WRKY12                                 <-------GAMYB       <------ZmHOX2a(2)            <---------WRKY38(1)                                <------MYB83        --------->ARR11(3)            <---------WRKY45                                <---------MYB46(3)  <---------ARR11(3)           --------->WRKY18(1)                                <------MYB46(1)    --------->YAB1   <------ZmHOX2a(1)      <---------MYB46(3)                    --------->YAB1       <---------LBD16   <---------LBD16      <-----------HVH21   < --------->ZAT6  --------->WOX13(1)    <---------SPL7======================HOX2a_HOX2a    <---------AtMYB61 ------->YAB1<-----------GT1 <-------GAMYB --------->LBD16--------->MYB52(1)  --------->ALFIN1     <-   ataacactacaagttaaaccaattagaagtgagttggttatggtccggtacaaagatcacaaccggagaaggattgaagagtggtcaaagcgatggtcag  9529900           --------->LBD16          <---------ANAC58          <---------ANAC46       --------->ARR14(2)     <---------DEAR3(2)     <------MYB46(1)     --------->MYB52(2)     <------MYB83     <---------MYB46(3)    --------->MYB111(1)                                                 <---------DAG2    <---------AtMYB61                                                   <----------DOF2   <--------P                                                       ------>ZmHOX2a(2)  <---------ANAC58                                                 <------ZmHOX2a(2)  <---------ANAC58                                                 --------->CCA1(2)                -  <-------GAMYB                                                   <---------ARR14(2)            <---- <------MYB46(1)                                                  <---------ARR11(3)           ------ <------MYB83                                                     --------->AGP1              <------NtERF2 <---------MYB46(3)                                               --------->ARR14(2)         ------>NtERF2 --------->MYB55(2)                  <----------DOF2              <-----------ARR10         --------- --------->MYB52(2)      ---------->DOF2                          --------->ARR11(3)        <-------- ---------AtMYB61    <------ZmHOX2a(1)     ------------>CBF     ----------->ARR10           --------- -------P <---------ANAC58 --------->DAG2 <-----------GT1     ---------->DOF2     <-------TEIL-------   agttggttggttccgtcgaaacaggaagaaaggtagagcctttttgacaatttgaagaaaatagcaaagatctacttttccacatacgttttcgacgccg  9530000                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                               --------->ALFIN1                                                                               <---------ANAC46                                                                             <---------ANAC58 -------->ICU4                                              <----------DOF2  <---------ANAC58 -----RAP2.6(3)                                         <---------CCA1(2)    <---------ANAC46 --->RAP2.6(2)                                        <---------DAG2       <---------MYB46(3) >ANAC46                                   ----------->GT1<---------YAB1  --------->ALFIN1        --- -DEAR3(1)                           ---------->DOF2  --------->TOE1(3)   <---------AtMYB61      <--- >DEAR3(1) *TSS               --------->HSFB2a(2)     --------->TOE2(3)   <---------DEAR3(1)   <----- -->RAP2.3(1)                 <---------HSFB2a(2)  <-----------GT1  <----------DOF2            ------   taatgagtcagaaacaactagggcctctcgttttagaagaaaagagagcaaaaaaaccttatctttgtgactttcggtggtgtgtgtgatgttgttgtcg  9530100                                    ------>ZmHOX2a(1)                                 <-----------GT1                      =====================HOX2a_HOX2a                                   <----------DOF2                      ------>ZmHOX2a(2)                                             <---------ALFIN1    <---------ANAC46 <------ZmHOX2a(2)                                             --------->MYB46(3) ------>WRKY18(1)    ======================HOX2a_HOX2a                           --------->ANAC58 --------HVH21      <---------ARR11(3)                                           --------->ANAC46 ----DREB2C(2)      --------->ARR11(3)                        <---------GLK1(2)  --------->ANAC58 --->ETT(1)  --------->AGP1  <----------DOF2     <---------CCA1(2)         --------->MYB46(3)   gtcatggcgaagacagagctacgatctctctctttttcctctcttatgtgtctatcttcgaacagagtctctcagaaacgacccagccactctttaaaac  9530200                                                                                       <---------AHL20(2)                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                                --------->RAP2.3(1)                                                                               <---------ATERF1(1)                                                                               <------NtERF2                                                                               ------>NtERF2                                                                              --------->RAP2.3(2)                                                                              --------->DEAR3(1)                                                                              <---------ATERF1(2)                                                                              --------->ATERF1(2)                                                                              <---------DEAR3(1)                                                                             --------->SPL7                                                                             --------->DEAR3(2)                                                                             --------->RAP2.3(1)                                                                             --------->ATERF1(1)                                                                            ------>NtERF2                                                                            <---------ATERF1(1)                                                                            --------->ATERF1(1)                                                                           --------->LBD16                                                                           ------>NtERF2                                                                           <---------ATERF1(1)                                         --------->TOE2(3)                 <---------SPL7  --------->YAB1                                    <----------DOF2                      --------->ATERF1(1)  -------                  ------>ZmHOX2a(1)<---------ANAC58                      <---------LBD16<-----------GT1               ---------->ID1      <---------ANAC58    ----------------------->TaNAC69(2) <---------ATHB12           <----------DOF2<---------GLK1(1)        ---------->DOF2<-----------GT1 --------->LBD16      ---------->DOF2     --------->GLK1(1)      <----------DOF2 <-----------GT1<---------LBD16    --   tccattggaaaagctttgtcctgttttgatatccatggctttaccttggtgcttaaagactggagttttaacgtctccggccgccggatttaatcatcca  9530300                                                                  <---------ARR14(2)                  --------->DEAR3(2)                --------->HSFB2a(2)                <---------ARR14(2)                  <---------HSFB2a(2)                         -----                <---------MYB52(1)                 ------>ZmHOX2a(2)                         --------               <---------SPL7                      <---------LBD16<-----------ARR10          --------          --------->ATERF1(1)               --------->DAG2        --------->GLK1(2)          --------        <---------ANAC58                   --------->DAG2         --------->ARR14(2)<----------DOF2        <---------ANAC58                  ---------->DOF2 --------->ATHB12        <---------At4g35610 -->MYB46(3)  --------->DEAR3(1)    --------->ARR14(2)   --------->ICU4           --------->At4g35610 --------->HVH21--------->ARR14(2)  <---------ARR14(2) ---------->DOF2  <---------ZAT2   ------>ZmHOX2a(1)   tcggacagtggcttcgccgttccgacgaagttactgagtattcgaaaaggtgatcgggaaagattgagaatccaagctgttttcagctttcctccaagaa  9530400      <------NtERF2     <---------At4g35610    --------->TCP16(1)                                                 <---------At4g35610    --------->TCP20                                                   <---------ALFIN1    <---------PCF2                                                   <------NtERF2   --------->ATERF1(1)                                              ------>NtERF2                ----  --------->ABI4(2)   --------->At4g35610  --------->ANAC58     --------->ALFIN1                <---- --------->ALFIN1     <---------At4g35610  --------->ANAC46    ------->MYC3                 <-------- ---->MYB52(1)   --------->ARR14(2)    --------->HSFB2a(2)     ------->MYC2                --------->At4g35610 ->ANAC46        <---------ARR14(2)    <---------HSFB2a(2)     <-------MYC3                <---------At4g35610 ->ANAC58    --------->At4g35610  ------->TEIL                 <-------MYC2          <---------YAB1 ->ANAC58 ---------->DOF2    --------->YAB1--------->ANAC58  ------->TEIL       ----------->RAV1(2)<-   acggtggagccgagaagcggaaacagctcaaacatgaacttgtcgaagccattgagcctcttgaacgtggtgccactgcctcgcctgatgatcagcttct  9530500  Previous    Next  AGI:  At3g26070.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 4, chloroplast precursor (PAP4) [Arabidopsis Thaliana] (GB:Q9LU85;GB:Q8W4A9); similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24749.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 9527951    to: 9529820    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26080.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 5, chloroplast precursor (PAP5) [Arabidopsis Thaliana] (GB:Q6DBN2;GB:Q9LU84); similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24749.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 9530011    to: 9531733    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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