Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------MYB46(3)                                                    --------->MYB111(1)                                                    <---------MYB46(3)                                                    --------->MYB111(2)                                                    --------->MYB52(2)                                        <---------MYB46(3)   <---------ANAC46                                     --------->ALFIN1<-------GAMYB              ================HOX2a_HOX2a<-------GAMYB  <------MYB83              <------ZmHOX2a(2)    ===========================MYC_MYB   <---------------AtSPL8          ==========================MYC_MYB -------AtMYB61        <------ZmHOX2a(1)----------->GT1 <------MYB46(1) ------DOF2  --------->ARR11(3)    <---------TGA1a  --------->MYB46(2)                       <------- ----ANAC58  <---------ARR11(3)  --------->ZAT14    --------->MYB55(2)                    <---------ZAT18 ----ANAC58 --------->YAB1       <---------ZAT14 ------------>MYB.PH3(2)           <---------YAB1   ttggtctagtacaaagatcacaacaggataagtactgaagtgtggttaaaatgttagttggttctgtgtatttgagtctctcgttttcattgtgaacacc  9527600                                                    --------->ANAC55(2)                                      <---------TOE2(3)                                      --------------->AtSPL8                                      --------------->AtSPL3                                      --------->MYB59         --------->STY1(2)                                      <---------------AtSPL8  <---------STY1(2)                                  --------->ANAC58  --------->At4g35610                                  --------->ANAC58  <---------ANAC55(2)      <---------YAB1         <                           --------->ZAT6           ----------->GT1         --------->AHL20(2)      <        <----------DOF2  <-----------GT1          <-----------RAV1(2)       <---------AHL20(2)  <---- --ALFIN1            --------->WOX13(1)   <-------TEIL   --------->ZAT6 --------->ATHB12   ----------   tctactatctctttctcttgtatcaattaacacttcaagtaaggtacacatatcaggtaactctagctagcccttgattaaaattgtcaaacacaaagct  9527700                                                                               <---------AtMYB61  <------ZmHOX2a(1)                                                          <---------ANAC46 ---------TOE2(3)                   --------->ANAC58                       <---------ZAT14 ---------TOE1(3)                   --------->ANAC58   --------->ZAT18     --------->ZAT14 ------DOF2                         --------->ANAC46   --------->ZAT14    <---------ZAT6 >DOF2  <---------ANAC46         <---------REM1(2)     <---------ZAT18    <-----------RAV1(1)   ttaaggaattgtgtagaatacatagaactcaagtcttcacacaatagttttagtatgtgaactcaagtactcaatagtgttgtggtctcaatctaatatt  9527800            <---------MYB52(1)              <---------ANAC46           --------->At5g28300        --------->ATHB12          ----------->GT1          <---------ANAC58          <---------TOE2(3)       ------------>MYB.PH3(1)     <---------ANAC58        ---------->DOF2                     ------   --------->AHL20(2)           <----------DOF2        <------ZmHOX2a(1)                --------->GLK1(2)   tgaaatttaaaacggttattttcgcattgtgtttctttcttgatttgagtatagacaggaataaaggtagagcctttggactgtatgaagaatatggcaa  9527900                              <---------bZIP60(2)                              <---------ANAC46                              <---------bZIP60(1)                              --------->bZIP60(1)                              --------->O2                              <---------O2                              --------->TGA2(1)                              >>>>>>>>>>HY5                                                    ------                           ----------->TGA1                                                <---------                        <---------AHL20(2)                                             <---------CCA1(2)            --------->ANAC58  <---------TGA2(1)    *TSS                            <---------ARR11(3)            --------->ANAC58 ----------->STF1 <---------ZAT2                       --------->GLK1(2)            --------->ANAC55(2)  <---------ANAC46 --------->DEAR3(1)               <-----------ARR10            --------->ANAC46<---------TGA2(2) --------->ZAT2                       --------->ARR11(3)    <---------MYB52(1) --------->AHL20(2)     <---------ABI4(2)                   --------->CCA1(1) ---->DOF2<-----------GT1  ----------->HVH21<------NtERF2           <---------YAB1--------->RVE1(1)--   agctctgtttttttacgcatttgtattaaatgacgtcgtataagtcggagcaccgagggcctctcgtttcatgagagaaacaaaaaatcttatctttctg  9528000          <---------ANAC46          <---------ANAC58          <---------ANAC58        <---------MYB46(3)       --------->ALFIN1     --------->MYB55(2)     <---------MYB46(3)                                       <----------DOF2    <---------DEAR3(1)                               ------>ZmHOX2a(2)    --------->ALFIN1                                <------ZmHOX2a(2)    <---------AtMYB61                              --------->ARR11(3)  ------->GAMYB                                    <---------ARR11(3)                          <----- ----->HVH21                                  --------->REM1(1)        <<<<<<<<<TBF1    --------->AHL20(2) -DOF2 <---------AtMYB61         ---------->DOF2  ------->GAMYB     <<<<<<<<<TBF1       <---------AHL20(2) ------->MYB52(1)    <-----------HVH21   --------->AGP1<------------------------ANAC81<----------DOF2   acaacggtggtggtgtgtgatgttgtcagccatggcaaagacagagctacaacgatctctctctcttttcttcttcttctgtgtctgtctttaaatagag  9528100                                                                                             --------                                                                                             <-------                                                       <----------DOF2            ------>NtERF2                        ------>ZmHOX2a(1) <----------DOF2                        --------->LBD16                     ---------->ID1      <---------ANAC58                        --------->ANAC46               --------->ZAT2<---------YAB1    --------->TOE2(3)                 ------>NtERF2               --------->At4g35610       <---------ANAC58---------->DOF2       <---------LBD16   <--- <----------DOF2 <----------DOF2<---------GLK1(1) <---------ANAC58             --------->ATERF1(1) ----GLK1(2)<---------At4g35610 --------->GLK1(1) <---------ANAC58   <----------DOF2        ---------   tctctttgaaacgaagcagctttgtcctgttctgatatccatggctttaccttcgtgcttaaagactggagctttaatgtctccggccactggatttaat  9528200    <---------MYB52(1)   --------->LBD16   ------>NtERF2  --------->ANAC46                      <---------ETT(1)  <---------LBD16                    --------->ARR14(2)  <---------RAP2.6(2)                <---------MYB52(1)  <---------ATERF1(2)                <---------ARR14(2)          --------->DAG2  --------->HSFB2a(2)               <---------SPL7              --------->DAG2  <---------HSFB2a(2)          --------->ATERF1(1)             ---------->DOF2  --------->ATERF1(2)         <---------ATERF1(1)          <---------HSFB2a(2) <---------LBD16             <---------ARR14(2)            --------->HSFB2a(2) ->AHL20(2)                  --------->ARR14(2)        --------->ZAT14                             <- --AHL20(2)              --------->At4g35610           <---------ZAT14                      --------- ------ICU4              <---------At4g35610---------->DOF2<---------------AGL15            --------- >AHL20(2)      <---------bZIP60(1)--------->DEAR3(1)  <---------ZAT18  ------>ZmHOX2a(2)   ---------   ttttccggcagtcttatgaagtcagacagcggcttcgccgttccgacaaagttacagagtactcgaaaaggtgatcgagagagattgagagtccaagcta  9528300                             --------->MYB52(1)                          --------->ANAC58                     ----------->HVH21                  <---------ARR14(2)                  --------->ARR14(2)                                                                <                <----------DOF2       <---------ZAT2                                              xxx               <---------ANAC58       --------->At4g35610                                        ----               <---------ANAC58       <---------At4g35610               --------->HSFB2a(2)     -----             ------>ZmHOX2a(1)        --------->ZAT2                    <---------HSFB2a(2)     <---- ----------GT1<---------TOE1(2)    <---------ETT(2)               --------->ARR11(3)            <---- >ANAC58   --------->ZAT2 --------->ANAC46                        <---------ARR11(3)            ----- >ANAC46   ----------->RAV1(2)    --------->WRKY18(1)  --------->At4g35610                    ------- >ANAC58   <---------ZAT2 --------->ANAC58             <---------At4g35610                  xxxxxxxxx   ttttcagtttccctcctgcgtttctgacaagaaacggtcgagctgagaaacagaaacagctcaaacaagaacttcttgaagccattgagcctcttgaacg  9528400                         <---------GLK1(2)    --------->SPL7      --------->At4g35610 ---------------AtSPL3  --------->ZAT2               <---------ANAC58 xxxxxxxxxxxxx>smallRNA(i)                           <---------ANAC58 ----->ALFIN1   <---------At4g35610                  <---------ANAC46 -->MYC3        --------->At4g35610         <----------DOF2 ---MYC2     ----------->RAV1(2)         <---------ARR11(3)                                 --------- ---MYC3  <------NtERF2 <---------ZAT2  <---------GLK1(2)              --------->ARR11(3)  --------->ZAT14 -->MYC2  --------->ATERF1(1)        <-----------RAV1(2)    <---------PCF2                 --------->ZAT18 >TEIL   <---------ATERF1(1)    <---------WOX13(1)<----------DOF2 <---------MYB52(1)       <---------ZAT18 xxxxxxxxxxx>smallRNA(se3) <---------LBD16<-------TEIL   <---------ANAC46                  <---------ZAT14   tggtgctacggcctcgcctgatgaccagcttcggattgatcaggttctttctctttcttgtgggaaccattagggtcttgagaatagtcttggtacacta  9528500  Previous    Next  AGI:  At3g26060.1    Description:  ATPRX Q; antioxidant/ peroxiredoxin. Identical to Peroxiredoxin Q, chloroplast precursor (PRXQ) [Arabidopsis Thaliana] (GB:Q9LU86); similar to 2-cys peroxiredoxin, chloroplast, putative [Arabidopsis thaliana] (TAIR:AT5G06290.1); similar to Peroxiredoxin Q, chloroplast precursor (Thioredoxin reductase) (GB:Q6QPJ6); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; (InterPro:IPR000866); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 9525970    to: 9527611    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g26070.1    Description:  plastid-lipid associated protein PAP / fibrillin family protein. Identical to Probable plastid-lipid-associated protein 4, chloroplast precursor (PAP4) [Arabidopsis Thaliana] (GB:Q9LU85;GB:Q8W4A9); similar to plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] (TAIR:AT3G26080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24749.1); contains InterPro domain PAP fibrillin; (InterPro:IPR006843) Range:  from: 9527951    to: 9529820    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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