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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                      <---------ICU4
                                                                      --------->YAB1
                                                                  --------->AHL20(2)
                                                                --------->TOE2(3)
                                                       <---------ARR11(3)
                                      --------->YAB1   --------->ARR11(3)
                                     <---------YAB1    --------->AHL20(1)
  <------ZmHOX2a(1)                <---------ICU4      <---------AHL20(1)
 ----------->GT1                   --------->YAB1      --------->AHL20(2)
-------->YAB1                     --------->ICU4       <---------AHL20(2)      <----------DOF2
------>GLK1(2)                   --------->AHL20(1)   --------->AHL20(2)<---------YAB1        ------
>GT1  ---------->DOF2           --------->YAB1    --------->AHL20(2) --------->ICU4     ----------->GT1
 
aatcaggataaaagtatatgtcccatagtttttaaaaataatgatatgtataactaaatatattgaaacttaattatgttatcttttttttttgttaaaa  9401800
                          --------->bZIP60(2)                                               --------
                         ------->MYC3                                                     --------->ATHB51
              ---------->DOF2                                                             <---------ICU4
         <---------AHL20(2)<-----------HVH21                                           --------->TOE2(3)
    <---------YAB1       <-------MYC3       <-------MYC2                        --------->YAB1
    <---------TOE1(3)   --------->O2        ------->MYC2                    <---------AHL20(2)    <-
    <---------TOE2(3)   <---------O2        <-------MYC3--------->GLK1(1)  <---------AHL20(2)    <--
--->ZAT6--------->AHL20(2)--------->ANAC46  ------->MYC3<---------GLK1(1)  --------->AHL20(2)   <---
 
ctagattaagattaaatgaaagaagacacatgtcacatcttagagcatgtgtttagaagaaatctctctattatctaaataaatagtaatccataatttt  9401900
                                             --------->HSFB2a(1)
                                             <---------HSFB2a(1)
                                             --------->HSFC1(2)
                                             <---------HSFC1(2)
                                            <---------ARR14(2)
                                            --------->ARR11(3)
                                            --------->GLK1(2)
                                           <---------GLK1(2)
     ---------->DOF2                 --------->ZAT6                                         --------
   <---------AHL20(2)             <---------AHL20(2)                                        --------
   --------->AHL20(2)             --------->AHL20(2)                                        --------
<---------------AGL15             <---------ICU4                                           <--------
--------------->AGL15         --------->AHL20(2)                                           ---------
->ICU4                        <---------YAB1--------->ARR14(2)      <---------TOE1(3)   <---------AHL20(2)
--------TOE2(3)               <---------AHL20(2)                    <---------TOE2(3)  --------->AHL20(2)
---------GT1                 --------->AHL20(2)                    ---------->DOF2     <---------AHL20(2)
--------GT1                  <---------AHL20(2)            <---------YAB1            --------->TOE2(3)
 
taacatttaaaagaaaatgacatttacaaaattttaattaatactagaatcttctataccttctaatagttaaagtaattttgtttttcattaaatgatt  9402000
                        <---------ANAC58                   --------->MYB52(2)              <--------
                        <---------ANAC58              <-------MYC3                     <---------AHL20(2)
                    <----------DOF2             --------->ANAC46                      <---------AHL20(1)
->ATHB12         --------->GLK1(2)              --------->ANAC58                 ----------->GT1
--->GT1          --------->ARR11(3)           <---------ALFIN1               --------->ARR11(3)
>HAHB4           <---------ARR11(3)          ------------>CBF                <---------ARR11(3)   <-
-ATHB12     ---------->DOF2            <---------ICU4 ------->MYC3     --------->YAB1 <---------ARR11(3)
>ICU4   <------ZmHOX2a(1)       ---------->DOF2 --------->ANAC58    <---------CCA1(2) --------->ARR11(3)
 
aaaacaaactaggagaaaagtatctttacttgttataaagaattatgccacaatccacatgttagtttctcatatcatgaaatcttgtatatattttcaa  9402100
                                             --------->ANAC58
                                             --------->ANAC58
                <---------AHL20(2)      ----------->HVH21
---GT1   --------->HSFB2a(2)          --------->At4g35610                                -----------
----------GT1 <----------DOF2         <---------At4g35610                   --------->AHL20(2)
 
gtttccagtcttccaggctttaatttgttttgaagttgtttatctgacaagcgataacaacacagagagaactcgtcgataaatttcaaagatggagaaa  9402200
                                                                              --------->LBD16
                                                                          ------->TEIL
                                                                          --------->ARR14(2)
                                 --------->AHL20(2)                       <---------ARR14(2)      <-
                                --------->AHL20(2)                     <---------ANAC55(2)        <-
                            <---------TOE2(2)                          --------->ANAC55(2)        <-
                      --------->GLK1(1)                               <---------TOE1(2)        -----
                      <---------GLK1(1)                              ------>ZmHOX2a(1)     <--------
              ----------->RAV1(2)<---------AHL20(2)     ----------->RAV1(1)  --------->ANAC46-------
            <<<<<<<<<GT-1   <---------TOE1(2)        ------>ZmHOX2a(1)<---------TOE2(2)    ---------
   --------->ZAT18   <---------ARR11(3)       <---------MYB52(1)<---------ANAC58      ----------->GT1
   <---------ZAT14   --------->ARR11(3)  ------------>MYB.PH3(1)--------->bZIP60(1) ----------->RAV1(2)
>GT1        <-----------GT1------>ZmHOX2a(1)----------->GT1     <---------ANAC58    --------->At4g35610
 
actgagtggtctgatttacctgaagaactcctagatttaattgcaaaccgttattcctccaacattgacgtcctacgtatccgtagcacctgtaaatcct  9402300
       <-------GAMYB                                      -------->P
      <---------MYB46(3)                                  ------>MYB46(1)
    <---------At4g35610                                   ------>MYB83
    <---------LBD16                                      ------>ZmHOX2a(1)                         <
--------ANAC58                                          <---------MYB59                            <
--------ANAC58                                --------->ANAC46                                  <---
--------ANAC46                                --------->ANAC58                   <-------TEIL  -----
->ZmHOX2a(1)                                  --------->ANAC58  ----------->RAV1(1) <---------CCA1(2)
-ARR14(2)                               <----------DOF2 <---------MYB111(2)---------->DOF2   <------
---->RAV1(2)                      --------->ARR14(2)  ------>MYB46(1)     --------->CCA1(2)  -------
>ARR14(2)          ---------->DOF2<---------ARR14(2)  ------>MYB83       --------->ARR11(3) --------
 
ggcgttctgcggttgcgatgtctaaagagcgtcttcagtttcgctttgaacgctaccttcctacctccaacaagaagataaaggctcatctctctcccac  9402400
       --------->LBD16
      <---------ANAC58
      <---------ANAC55(2)
      <---------ANAC46
      <---------ANAC58
      <---------ANAC55(1)
---------DAG2                                <---------ANAC46
----------DOF2                          <------ZmHOX2a(1)
------ALFIN1                          <---------TOE2(3)
---->MYB46(3)                       ---------->DOF2                              <---------TOE1(2)
---ALFIN1                         >>>>>>>>>MYB98              --------->ANAC58--------->YAB1
-->ANAC46    --------->ZAT6     ------>ZmHOX2a(1)    --------->ARR11(3)     ------->TEIL
->MYB46(3) <-----------GT1     <---------MYB59 ----------->GT1--------->ANAC58----------->GT1    <--
 
cactttcttccgtataactctcccttcttcatgtcctaacaaaggatggctagtaagaactagacaagcctccaaaatgtatcgtaagattactctcttg  9402500
                                            <---------DAG2
                                  ------>MYB83
                                <---------MYB111(1)       <---------ANAC58
                                --------->AtMYB61         <---------ANAC58
                                <---------MYB46(2)        <---------ANAC46
                                <---------MYB111(2)      <------NtERF2<-------TEIL--------->ANAC55(2)
                                <---------MYB55(2)      <------MYB46(1)        --------->TOE1(2)
                                --------->MYB46(3)      <------MYB83 --------->CCA1(2)
                 <-----------HVH21------>MYB46(1)      <---------DEAR3(1)    <---------ATHB12
          <---------ANAC58     --------->ANAC58       <--------P     --------->ARR14(1)
          <---------ANAC58     --------->ANAC46    <---------TOE1(3)<---------ARR14(2)
          <---------ANAC46   --------->ANAC46<----------DOF2        <---------GLK1(2)
 ------>ZmHOX2a(1) <---------ALFIN1       <---------ARR11(3)        --------->ARR11(1)
-------ZAT18   --------->ZAT18 --------->ANAC58    <---------TOE2(3)--------->ARR14(2)  <-------TEIL
 
tgtcctctctctggcgagcgcatcacccgttcccaccaaaccctagaccttttgaaggttggcgtttcagagattcgccaatcttacgagattcaaatat  9402600
                   <---------ARR11(3)
                   --------->ARR11(3)            <---------AHL20(2)
               ---------->DOF2                   --------->YAB1
            --------->ANAC58          <---------RVE1(1)        <----------ID1           <----------DOF2
            --------->ANAC58         <---------ARR11(3)      ----------->GT1   --------->At4g35610 <
          <------ZmHOX2a(1)          --------->ARR11(3)   --------->YAB1     <-----------RAV1(2)  <-
         <----------ID1        <-------TEIL      --------->AHL20(2)        <-----------HVH21      <-
 
tcgatggattgaaggacgaaaagataccattagattcagagatattctctaattatatcaagaatagtgacaaaataccatcaggtgtattctttagagt  9402700
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AGI:  At3g25750.1   
Description:  F-box family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G26160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47506.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810)
Range:  from: 9402192    to: 9403325    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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