Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                       --------->AHL20(2)                        <------NtERF2                      --------->AHL20(2)         <---------AHL20(2)                        --------->At5g28300                <---------AHL20(2)         <-----------GT1                       --------->RAP2.6(2)             <---------AHL20(2)   <---------AHL20(2)  -----                       ----------->GT1              <---------AHL20(1) <---------AHL20(2) <---------AHL20(2)                      <----------ID1        --------->ANAC58          --------->AHL20(1) <----------- -------->GT1     ---------->DOF2  --------->YAB1   --------->AHL20(1)<---------AHL20(1) ------------ ---->DOF2      <---------YAB1--------->AHL20(2)   --------->AHL20(2) --------->AHL20(2)<------------ -ID1 ----------->GT1--------->RAP2.6(3)    --------->ANAC58          <---------AHL20(2)--------->ANAC55(2)   aggaaaaacagtagaaatatcaaagcggcaaataaaatcatacaacaagtcaaatatataaaaaaatagaaatttaatttaaactaatttacttaattta  9334600                                                                --------->ANAC55(2)         <----------DOF2                                        <---------ANAC58   --------->MYB52(1)  <---------AHL20(2)                       <---------ANAC55(2) ------>GT1            --------->AHL20(2)                       <---------ANAC58 --------->DAG2 ----AGL15    <---------ANAC55(2)                               <---------ANAC55(1) --->AGL15    --------->ANAC55(2)        --------->TOE2(3)      <---------ANAC46---------->DOF2 -----AGL3    --------->ANAC46        --------->YAB1     --------->YAB1  ----------->GT1   gtaaataagggcttatacgtgatatataatttcaaaacaataatcttataaaaaaacaataatcttacgtgaaatcagtaaataaagtgctatgcaattc  9334700                                    --------->ARR14(2)                                    <---------MYB52(1)                                    <---------ARR14(2)                                  <---------MYB46(3)          <---------AHL20(2)                                  ----------->GT1            --------->AHL20(2)                                <---------ZAT18             <---------YAB1                               --------->ALFIN1           <---------ICU4                         --------->ZAT18                  -------->ATHB1                         <---------ZAT18                 --------->AHL20(2)                         --------->ZAT14                 <---------AHL20(2)                         <---------ZAT14                 --------->ICU4                     --------->DAG2<-------GAMYB   <-----------GT1                                  -                    ---------->DOF2--------->At5g28300   <---------ATHB51                           <      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           --------->YAB1           ---------->DOF2        --     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->YAB1--------->AHL20(2)                 ----     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       --------->AHL20(2)     ----------->GT1  ----------->GT1   taacaaaaaaaaaaaaaaaaaaaaaagtgcactgtgcggttactctccattaataacaaattattaaaaaaacagtagaaaagacagagagattaaaaca  9334800                                <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(2)                            --------->AHL20(2)                            <---------AHL20(2)         --------->AHL20(2) --------->ATHB51         <---------AHL20(2) <--------ATHB1         <---------YAB1  --------->YAB1        <---------AHL20(1)  <---------ICU4        --------->AHL20(1) <---------YAB1                                                 --------->TOE2(3)        --------->AHL20(2) --------->ICU4                                        ----------->RAV1(1)       --------->YAB1  --------->AHL20(2)                                       <------NtERF2-------- <-----------HVH21     --------->AHL20(1)                                     --------->RAP2.6(2) ---------->GT1       --------->YAB1                                          --------->RAP2.3(3) ----------ID1      --------->AHL20(2)                       ----------->GT1  --------->PCF2--------- ------->DAG2      --------->AHL20(2)                 <---------AHL20(2)    --------->At4g35610 ------>DOF2       --------->YAB1 ---------->DOF2     --------->AHL20(2)    <---------At4g35610   aaaggtcaaatataatttcaataaaaataataatttaaaagtgatcaaatttgtatttaattttagttaaatcaaatcagcccccacaaaaacattaaaa  9334900                                                                                     <---------ARR11(3)        ---------->DOF2                                                              <---------GLK1(2)       --------->AHL20(2)                                                            --------->ARR11(3) ->AHL20(2)                                             *TSS               --------->YAB1 >AHL20(2)   ------------>CBF --------->TOE1(2)  ------------>CBF       --------->YAB1          <----   aaaactccattaaagaccaatataagagagaacatgagagtccaaacttcattcaattcaagtctcagttccaagaataaaaacaaagattttgtatttt  9335000                                                                    --------------->AGL15                --------->WOX13(1)                                  <---------------AGL15       --------->CCA1(2)    <---------ALFIN1                       <-----------------AGL3  ---------->DOF2         ----------->RAV1(1)                      <-----------------AGL1 --------->AHL20(2)--------->TOE2(3)                            <---------MYB52(1)    ---------->DOF2 <---------AHL20(2)--------->YAB1                             --------->ANAC46     >>>>>>>>>TBF1 -----YAB1    <---------ATHB12  --------->ZAT14       <----------DOF2           >>>>>>>>>TBF1<-------   catttaaagagatgaaatcaatcttagccaacacttctctcgactcttcattctctctttctaaacgttacttcaattggaagaagaagaaagttcaaga  9335100                                                                                             --------                                                                                           ----------                                                                                          --------->MYB46(3)                                                                                          --------->DEAR3(2)                                                                                      ----------->HVH21                                                                                      <---------ETT(1)                                                                                     --------->DEAR3(2)                                                                                     --------->MYB46(3)                                                                                 ----------->HVH21                                                    ---------->DOF2              --------->WRKY12                                               ----------->GT1                 <---------At4g35610                                        ------->GAMYB                          ======================    ------>NtERF2   >>>>>>>>>TBF1       --------->TOE2(3)                      ------>ZmHOX2a(1)   <-   --------->DEAR3(1)  >>>>>>>>>TBF1    --------->AtMYB61   <---------WRKY18(1)--------->At4g35610<-- --HSFB2a(2)    <------ZmHOX2a(1)      --------->MYB46(3)  ----------->HVH21   ----------->RAV1(2)---   agacgacgacgaagaagaggaagaagaagaagacgattacaaccacaacgagaaaaaagtcttgacccgtttcaatttctcctctgacccgacccgaccg  9335200                                                           <---------MYB52(1)                                                        <-------TEIL                                -                                                        ------>ZmHOX2a(2)                          <-                                                       <------ZmHOX2a(2)                         ----                                                       --------->ARR14(1)                       <----    --------->ZAT14                                   --------->ARR11(3)                       <-----    <---------ZAT14                                   ------------>MYB.PH3(1)                --------  --------->At4g35610                                 <---------ARR14(2)                     <------- ->MYB52(1)  --------->MYB52(1)                       --------->ARR14(2)                    <-------- ->HVH21     ----------->RAV1(1)                      <---------ARR11(3)             <---------ARR14(2) =====HOX2a_HOX2a                     ---------->DOF2--------->RVE1(1)               --------->ARR14(2) -----ZmHOX2a(2)                  <----------ID1    ----------->ARR10            <---------LBD16<---- -------ARR14(2)                ---------->DOF2   ---------->DOF2      <---------GLK1(2)    --------- ------>ARR14(2)         ----------->GT1      <---------HSFB2a(2)    <---------TOE1(2)--------->ALFIN1   gatcagttcaatgcccaacagataatgaagaaaaaaaagaaaaagactctcgaaaagatccgttacgctctcgggttctctaactcgggtctgggtttcc  9335300                                   <-------MYC3                                   ------->MYC3         ----------------->AGL1    <-------MYC2         --------->ANAC58          ------->MYC4         --------->ANAC58          ------->MYC2        --------->SPL7             <-------MYC4        <-------TEIL              <---------TGA1a     <---------DEAR3(2)           --------->ANAC55(2)    <---------TOE1(2)             <---------ANAC46    <---------MYB46(3)            --------->TGA1a   <---------ANAC46               <---------O2 <---------ANAC58         <---------ANAC46 <---------ANAC58       <-----------HVH21 <---------ANAC46      =====================MYC_MYB <---------MYB46(3)    ------->GAMYB   ------->TEIL -------->ALFIN1      ======================MYC_MYB ----------HVH21      <------------AtMYB77                                  <---------ANAC46 ----->LBD16          --------->DEAR3(2)                                   <---------DEAR3(1) -----ANAC58          --------->MYB46(3)                                  <---------LBD16 ----LBD16--------->TOE2(3)       <---------ANAC55(2)                   --------->TOE2(2)      ------ ->ARR14(2)          <---------At5g28300   ------------------>SPL14    ----------->RAV1(2)  --------- --ARR14(2)<---------MYB52(1)     <--------ABF1                        <---------ANAC58    <---------At5g28300 -GLK1(1)--------->ANAC55(2)  <-----------------PIF3(1)     ----------->HVH21 --------->ALFIN1 ------ -----ANAC58    --------->MYB59   --------->O2 <---------SPL7          <---------ANAC58    <---------DOF5.7(2) >GLK1(1)<---------ANAC55(2) <---------ZAT18  --------->DEAR3(1)    --------->WRKY12 ------>ZmHOX2a(2)   gggtcgtgggtacgttattcggtaaccgtcgtggacacgtgtacttcgccgtacaagatgacccgactcgtttacctgcggtgttgatccagttaccgac  9335400                  ----------->HVH21                 --------->LBD16                              <---------ANAC46      <---------HSFB2a(1)                                     <---------ANAC58      --------->HSFB2a(1)                                     <---------ANAC58   ------->GAMYB<---------ANAC58                          --------->At4g35610               <--------  <---------MYB52(2)       <----------DOF2         --------->ANAC58                         ---------  --------->MYB46(3)       <-----------HVH21       --------->ANAC58                      <----------DOF2 >MYB83         <---------ANAC58      <---------ZAT6  --------->MYB52(1)      ======================= >DEAR3(2)<---------ANAC58<---------ANAC58 --------->GLK1(2) <------NtERF2  <-------TEIL ============ >MYB46(1)<---------ANAC58<---------ANAC58<---------GLK1(2)<---------DEAR3(1) ---------->DOF2   tccaacgagcgttcttgtccgtgaaatggcttcagggctagtgagaatcgcgctcgaaacggctgcgtataagacagattcaaagaagaagcttttagaa  9335500  Previous    Next  AGI:  At3g25640.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42071.1); contains InterPro domain Protein of unknown function DUF617, plant (InterPro:IPR006460) Range:  from: 9334956    to: 9336041    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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