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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                     <---------At5g28300
                    <-----------GT1
                    <---------ICU4
                 --------->YAB1
      <---------AHL20(2)    ----------->RAV1(1)
      <---------AHL20(1)   --------->ANAC46
     --------->AHL20(2) <---------ZAT14
     <---------AHL20(2) --------->ZAT18
 --------->AHL20(2)<---------YAB1
-------->GT1     <---------ICU4
-----P--------->AHL20(2)<---------ZAT18                              ----------->GT1
---GAMYB        <---------ATHB12                                    --------------->AtSPL8         -
----ANAC46      --------->ICU4                         ----------->GT1      --------->AHL20(2)     <
----->GT1       --------->AHL20(2)                     <------MYB83 <---------------AtSPL8      <---
---AGL15        <---------ATHB51                       <------MYB46(1)    <----------DOF2      -----
--->AGL1        <---------AHL20(2)                 --------->LBD16  <---------------AtSPL3     <----
--->AG--------->AHL20(1)--------->ZAT14          <---------LBD16 --------->ATHB12        -----------
 
ttgaaaaaataaattccaaataattactgcacaacattttttataagtttaatgcggaaggtgaagaatgaatggtactttaaattcttatatagtaaat  9308100
-------->HAHB4
--------->ATHB12                    <-----------RAV1(1)
-------->ICU4                   <---------AHL20(2)               <------MYB46(1)
---------ATHB12                 <---------YAB1                   <------MYB83
------AHL20(2)                --------->YAB1<---------ARR11(3)  <---------TOE1(2)      <---------AHL20(2)
---->AHL20(2)                <---------YAB1 --------->ARR11(3)  --------->MYB59  <----------DOF2
-----AHL20(2)               --------->AHL20(2)                  <---------TOE2(2)<---------DAG2 ----
>GT1 <---------TOE2(3)      <---------AHL20(2)        ------->GAMYB           <-----------GT1 <-----
 
aaatgattaagaaaaaccctacttcaactatttttataattgtgggagatattacaacgaaatttagtaggttaactagatttactttattgaattttca  9308200
          --------->YAB1
         <<<<<<<<<ARR2
         <---------ATHB12
       --------->WOX13(1)
     <---------ATHB12
    ------>MYB83   <---------HSFB2a(1)                                            ------->GAMYB <---
    ------>MYB46(1)--------->HSFB2a(1)                                           <------------MYB.PH3(1)
  --------->MYB46(3)                                                           <---------DOF5.7(2)
  <---------MYB46(2)             ------->GAMYB                                 --------->MYB52(1)
----->ANAC46 ---------->DOF2  --------->MYB52(1)                    ---------->DOF2             <---
------GT1<<<<<<<<<ARR1        <-----------GT1  --------->AHL20(2)  --------->AHL20(2)<-------TEIL <-
 
catcaccaaacaatcataaagaattttctcaaataacagcctgtgtaaaataaaacaatacactatgaaataaaagaattggtaacggtccatttgaata  9308300
                                                                --------->WOX13(1)
                                                              <---------MYB52(1)
                                                             <-----------HVH21
                                                            --------->DEAR3(1)
                                                          <---------At5g28300
                                                         <-----------GT1
                                   <---------MYB59  --------->ATHB12
                                  --------->ANAC58  <---------ICU4
                                  --------->ANAC58 <---------ATHB12                             <---
                                 ------>MYB83  <---------AHL20(2)                               ----
                                 ------>MYB46(1)<---------AHL20(2)                              <---
                                ------>ZmHOX2a(1)  <---------YAB1                               ----
  <-----------GT1              <---------MYB111(1) --------->ICU4                ---------->ID1 <---
 <---------AHL20(2)    <---------bZIP60(2)     --------->AHL20(2)         <---------AHL20(2)   -----
------YAB1             <---------ANAC46        <---------AHL20(1)         --------->AHL20(2)   -----
------AHL20(2)--------->At4g35610-------->P    --------->AHL20(1)       <----------DOF2    ---------
--------AHL20(2)  <---------ANAC46--------->ANAC46<---------TOE2(3)  <---------ALFIN1<---------ALFIN1
 
ttattttatcacatataagctgtgtgatgtgcttcctacccaatttccaatttaatgatttcaccgtcaatcccactttaatttgtctccacatattaat  9308400
        <------------CBF
       <------------ATHB5
       --------->ATHB12
       --------->ATHB51
       <---------ICU4
       --------->YAB1
       <--------ATHB1
       -------->ATHB1
      <---------ATHB51
      <---------ATHB12
      --------->ICU4
  ------------>CBF
  <---------YAB1
--------ARR10               ----------->TBP
----->ARR11(3)          <---------ATHB12
------AHL20(1)         ------>MYB46(1)            <---------AHL20(2)
----->AHL20(1)         ------>MYB83              <---------AHL20(2)                       *TSS
------ARR11(3)        --------->WOX13(1)         --------->AHL20(2)                 <-----------GT1
---->RVE1(1)        ------------>CBF             <---------AHL20(1)               <---------YAB1
---->CCA1(1)   --------------->AtSPL3      ----------->GT1                     --------->AHL20(1)
>AHL20(2)      --------------->AtSPL8  --------->ARR11(3)     <-----------GT1  <---------AHL20(1)
 
atcttatcaataattgaaacagtaccaatctataaatctatagataatgtaataaaattttgaatttactatttcaactaaaaatattatcaacttcttc  9308500
                                                                         --------->RVE1(1)
                                                                        --------->GLK1(2)
                                                                        <---------ARR11(3)
                                                                        --------->ARR11(3)
                                                                       --------->RVE1(1)
                                                                       --------->CCA1(1)
         <---------ARR14(2)                                          --------->AHL20(2)
     <---------LBD16               --------->At4g35610    --------->TOE2(3)             <----------DOF2
  ---------->DOF2                  <---------At4g35610    --------->TOE1(3)  <----------DOF2
 
tccaaaaacgcggtttcttcgagtttaagaaactattcatctccaaactttcaaaaaaaaacctaaaacaaaaaaaatctctttccttcttctttctcca  9308600
                 -------->P
                 ------>MYB46(1)                    <---------TOE1(2)                   <---------ZAT2
                 ------>MYB83               <---------ARR11(3)                          <---------At4g35610
                --------->MYB55(1)          --------->ARR11(3)                      --------->ANAC46
                --------->MYB52(1)         <---------CCA1(1)                      --------->MYB52(1)
               --------->AtMYB61           --------->CCA1(1)                   --------->TOE1(3)
              --------->MYB46(3)           --------->GLK1(1)                  <---------At4g35610
     <------NtERF2--------->MYB46(3)       <---------GLK1(1)                  --------->At4g35610
   <---------ANAC58                        <---------RVE1(1)             --------->ANAC58        ---
   <---------ANAC46                       <---------ARR11(3)             --------->ANAC58    <<<<<<<ZML2
   <---------ANAC58                   ---------->DOF2                  <------ZmHOX2a(1)--------->At4g35610
   --------->bZIP60(1)     <---------ATHB12--------->RVE1(1)         --------->ANAC58   --------->ZAT2
   <---------bZIP60(1)<------ZmHOX2a(2)   --------->ARR11(3)         --------->ANAC58  ------->TEIL
 
tcaatggcgtcaacaaaaccaaccgatcaaatcaaacaactcaaagatatcttcgctcgtttcgacatggacaaggacggaagcttaacgcagctagaac  9308700
                                                                                        --------->LBD16
                                                                                       <---------ANAC46
                                                                                      ------>ZmHOX2a(2)
                                                                                     <------ZmHOX2a(2)
                                                                                    <---------ARR14(2)
          <---------ANAC58                                                          --------->ARR14(2)
          <---------ANAC58                                                     --------->MYB52(1)
     ----------------------->TaNAC69(2)                                      --------->At5g28300
   <----------DOF2                        <---------CCA1(2)    ------>MYB46(1) <---------DOF5.7(2)
 ------>NtERF2                         <------ZmHOX2a(2)       ------>MYB83  --------->DOF5.7(2)
--------->DEAR3(1)             --------->ANAC46       <-------GAMYB         ------->GAMYB
------>ANAC46    <---------LBD16   <------NtERF2     <-----------RAV1(1) --------->MYB52(1) <-------
 
tcgccgctcttctgcgttctctcggaatcaaacctcgcagcgatcaaatctctcttctgttgaaccaaatcgaccgtaacggtaacggatccgtagagtt  9308800
                                                                                                ----
                                                                                               <----
                       --------->LBD16                                                    --------->MYB52(1)
                       <XXXXXXXXXXXXXXXXXXXXMIR780.2                                     -----------
                      <---------ANAC46                                                   -----------
            <------NtERF2                                                      --------->MYB52(2)
        <---------ANAC58 --------->ARR14(2)                                    <---------MYB46(3)  -
        <---------ANAC58 <---------ARR14(2)                                  <---------MYB52(1)-----
  --------->ZAT2      --------->LBD16                                      <---------ANAC58 <-------
  <---------ZAT2     <---------LBD16              <---------ATHB12         <---------ANAC58 <-------
--ZAT6  <---------MYB46(3)--------->CCA1(2)<---------YAB1          <---------TOE2(3)   ------>ZmHOX2a(2)
 
cgacgagctggtcgtggcgatattgccggatataaacgaagaggttttgataaatcaagaacagttgatggaggttttccgttcgtttgatcgtgacgga  9308900
                        <---------ANAC58
                        <---------ANAC58
                  <---------ARR14(2)
                  --------->ARR14(2)
                 <------NtERF2
              --------->RAP2.3(1)
              <------NtERF2
              --------->ATERF1(1)
              <---------At4g35610
             <---------RRTF1(1)
             <---------ATERF1(1)
             <---------DEAR4(2)
             <---------ORA47(2)
             <---------ERF1
             ------>NtERF2
            <---------RAP2.3(3)
            <---------DREB2C(2)
            <---------RRTF1(2)
            <---------ATERF1(2)
            <---------RRTF1(3)
            <---------DEAR3(1)                                 --------->At5g28300
            --------->DEAR3(1)                                 --------->LBD16
            <---------RAP2.6(2)                               <---------ANAC46
            <---------RAP2.3(2)                             <---------At5g28300
          <---------RAP2.3(1) <---------WRKY38(1)           -------->P
----->MYB52(1)<---------LBD16 <---------WRKY12        --------->WRKY38(1)                --------->At4g35610
-----ARR14(2)<---------RAP2.3(1)                      --------->WRKY45           ----------->TGA1
>TGA1     ------->GAMYB--------->ZAT2                 --------->WRKY12         <---------ICU4
>HVH21 --------->MYB52(1)    --------->WRKY18(1)     --------->DOF5.7(2)       --------->YAB1
---------->GT1--------->At4g35610                    <---------MYB52(1)       --------->ICU4      --
---->ARR14(2)<---------RAP2.6(1)                    --------->At4g35610  ------->GAMYB   <---------At4g35610
--ANAC55(2)<---------ABI4(1)<-----------HVH21  --------->GLK1(1)      --------->MYB52(1) <---------ZAT2
--ANAC46<---------At5g28300 <--------ZAP1      <---------GLK1(1)<---------MYB52(1)  <---------ANAC55(2)
 
aacggttcaataacggcggcggaacttgctgggtcaatggctaaaatgggacatccgttgacttaccgtgaattaacggaaatgatgacggaagctgatt  9309000
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AGI:  At3g25597.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26140.1)
Range:  from: 9307159    to: 9308003    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At3g25600.1   
Description:  calmodulin, putative. similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT1G18530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67981.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:  from: 9308491    to: 9309204    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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