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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
At5g28300
<-----------
GT1
<---------
ICU4
--------->
YAB1
<---------
AHL20(2)
----------->
RAV1(1)
<---------
AHL20(1)
--------->
ANAC46
--------->
AHL20(2)
<---------
ZAT14
<---------
AHL20(2)
--------->
ZAT18
--------->
AHL20(2)
<---------
YAB1
-------->
GT1
<---------
ICU4
-----
P
--------->
AHL20(2)
<---------
ZAT18
----------->
GT1
---
GAMYB
<---------
ATHB12
--------------->
AtSPL8
-
----
ANAC46
--------->
ICU4
----------->
GT1
--------->
AHL20(2)
<
----->
GT1
--------->
AHL20(2)
<------
MYB83
<---------------
AtSPL8
<---
---
AGL15
<---------
ATHB51
<------
MYB46(1)
<----------
DOF2
-----
--->
AGL1
<---------
AHL20(2)
--------->
LBD16
<---------------
AtSPL3
<----
--->
AG
--------->
AHL20(1)
--------->
ZAT14
<---------
LBD16
--------->
ATHB12
-----------
ttg
aaaaaataaattccaaataattactgcacaacattttttataagtttaatgcggaaggtgaagaatgaatggtactttaaattcttatatagtaaat
9308100
-------->
HAHB4
--------->
ATHB12
<-----------
RAV1(1)
-------->
ICU4
<---------
AHL20(2)
<------
MYB46(1)
---------
ATHB12
<---------
YAB1
<------
MYB83
------
AHL20(2)
--------->
YAB1
<---------
ARR11(3)
<---------
TOE1(2)
<---------
AHL20(2)
---->
AHL20(2)
<---------
YAB1
--------->
ARR11(3)
--------->
MYB59
<----------
DOF2
-----
AHL20(2)
--------->
AHL20(2)
<---------
TOE2(2)
<---------
DAG2
----
>
GT1
<---------
TOE2(3)
<---------
AHL20(2)
------->
GAMYB
<-----------
GT1
<-----
aaatgattaagaaaaaccctacttcaactatttttataattgtgggagatattacaacgaaatttagtaggttaactagatttactttattgaattttca
9308200
--------->
YAB1
<<<<<<<<<
ARR2
<---------
ATHB12
--------->
WOX13(1)
<---------
ATHB12
------>
MYB83
<---------
HSFB2a(1)
------->
GAMYB
<---
------>
MYB46(1)
--------->
HSFB2a(1)
<------------
MYB.PH3(1)
--------->
MYB46(3)
<---------
DOF5.7(2)
<---------
MYB46(2)
------->
GAMYB
--------->
MYB52(1)
----->
ANAC46
---------->
DOF2
--------->
MYB52(1)
---------->
DOF2
<---
------
GT1
<<<<<<<<<
ARR1
<-----------
GT1
--------->
AHL20(2)
--------->
AHL20(2)
<-------
TEIL
<-
catcaccaaacaatcataaagaattttctcaaataacagcctgtgtaaaataaaacaatacactatgaaataaaagaattggtaacggtccatttgaata
9308300
--------->
WOX13(1)
<---------
MYB52(1)
<-----------
HVH21
--------->
DEAR3(1)
<---------
At5g28300
<-----------
GT1
<---------
MYB59
--------->
ATHB12
--------->
ANAC58
<---------
ICU4
--------->
ANAC58
<---------
ATHB12
<---
------>
MYB83
<---------
AHL20(2)
----
------>
MYB46(1)
<---------
AHL20(2)
<---
------>
ZmHOX2a(1)
<---------
YAB1
----
<-----------
GT1
<---------
MYB111(1)
--------->
ICU4
---------->
ID1
<---
<---------
AHL20(2)
<---------
bZIP60(2)
--------->
AHL20(2)
<---------
AHL20(2)
-----
------
YAB1
<---------
ANAC46
<---------
AHL20(1)
--------->
AHL20(2)
-----
------
AHL20(2)
--------->
At4g35610
-------->
P
--------->
AHL20(1)
<----------
DOF2
---------
--------
AHL20(2)
<---------
ANAC46
--------->
ANAC46
<---------
TOE2(3)
<---------
ALFIN1
<---------
ALFIN1
ttattttatcacatataagctgtgtgatgtgcttcctacccaatttccaatttaatgatttcaccgtcaatcccactttaatttgtctccacatattaat
9308400
<------------
CBF
<------------
ATHB5
--------->
ATHB12
--------->
ATHB51
<---------
ICU4
--------->
YAB1
<--------
ATHB1
-------->
ATHB1
<---------
ATHB51
<---------
ATHB12
--------->
ICU4
------------>
CBF
<---------
YAB1
--------
ARR10
----------->
TBP
----->
ARR11(3)
<---------
ATHB12
------
AHL20(1)
------>
MYB46(1)
<---------
AHL20(2)
----->
AHL20(1)
------>
MYB83
<---------
AHL20(2)
*
TSS
------
ARR11(3)
--------->
WOX13(1)
--------->
AHL20(2)
<-----------
GT1
---->
RVE1(1)
------------>
CBF
<---------
AHL20(1)
<---------
YAB1
---->
CCA1(1)
--------------->
AtSPL3
----------->
GT1
--------->
AHL20(1)
>
AHL20(2)
--------------->
AtSPL8
--------->
ARR11(3)
<-----------
GT1
<---------
AHL20(1)
atcttatcaataattgaaacagtaccaatctataaatctatagataatgtaataaaattttgaatttactatttcaactaaaaatattat
caacttcttc
9308500
--------->
RVE1(1)
--------->
GLK1(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
RVE1(1)
--------->
CCA1(1)
<---------
ARR14(2)
--------->
AHL20(2)
<---------
LBD16
--------->
At4g35610
--------->
TOE2(3)
<----------
DOF2
---------->
DOF2
<---------
At4g35610
--------->
TOE1(3)
<----------
DOF2
tccaaaaacgcggtttcttcgagtttaagaaactattcatctccaaactttcaaaaaaaaacctaaaacaaaaaaaatctctttccttcttctttctcca
9308600
-------->
P
------>
MYB46(1)
<---------
TOE1(2)
<---------
ZAT2
------>
MYB83
<---------
ARR11(3)
<---------
At4g35610
--------->
MYB55(1)
--------->
ARR11(3)
--------->
ANAC46
--------->
MYB52(1)
<---------
CCA1(1)
--------->
MYB52(1)
--------->
AtMYB61
--------->
CCA1(1)
--------->
TOE1(3)
--------->
MYB46(3)
--------->
GLK1(1)
<---------
At4g35610
<------
NtERF2
--------->
MYB46(3)
<---------
GLK1(1)
--------->
At4g35610
<---------
ANAC58
<---------
RVE1(1)
--------->
ANAC58
---
<---------
ANAC46
<---------
ARR11(3)
--------->
ANAC58
<<<<<<<
ZML2
<---------
ANAC58
---------->
DOF2
<------
ZmHOX2a(1)
--------->
At4g35610
--------->
bZIP60(1)
<---------
ATHB12
--------->
RVE1(1)
--------->
ANAC58
--------->
ZAT2
<---------
bZIP60(1)
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ANAC58
------->
TEIL
tca
atggcgtcaacaaaaccaaccgatcaaatcaaacaactcaaagatatcttcgctcgtttcgacatggacaaggacggaagcttaacgcagctagaac
9308700
--------->
LBD16
<---------
ANAC46
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
ANAC58
--------->
MYB52(1)
----------------------->
TaNAC69(2)
--------->
At5g28300
<----------
DOF2
<---------
CCA1(2)
------>
MYB46(1)
<---------
DOF5.7(2)
------>
NtERF2
<------
ZmHOX2a(2)
------>
MYB83
--------->
DOF5.7(2)
--------->
DEAR3(1)
--------->
ANAC46
<-------
GAMYB
------->
GAMYB
------>
ANAC46
<---------
LBD16
<------
NtERF2
<-----------
RAV1(1)
--------->
MYB52(1)
<-------
tcgccgctcttctgcgttctctcggaatcaaacctcgcagcgatcaaatctctcttctgttgaaccaaatcgaccgtaacggtaacggatccgtagagtt
9308800
----
<----
--------->
LBD16
--------->
MYB52(1)
<XXXXXXXXXXXXXXXXXXXX
MIR780.2
-----------
<---------
ANAC46
-----------
<------
NtERF2
--------->
MYB52(2)
<---------
ANAC58
--------->
ARR14(2)
<---------
MYB46(3)
-
<---------
ANAC58
<---------
ARR14(2)
<---------
MYB52(1)
-----
--------->
ZAT2
--------->
LBD16
<---------
ANAC58
<-------
<---------
ZAT2
<---------
LBD16
<---------
ATHB12
<---------
ANAC58
<-------
--
ZAT6
<---------
MYB46(3)
--------->
CCA1(2)
<---------
YAB1
<---------
TOE2(3)
------>
ZmHOX2a(2)
cgacgagctggtcgtggcgatattgccggatataaacgaagaggttttgataaatcaagaacagttgatggaggttttccgttcgtttgatcgtgacgga
9308900
<---------
ANAC58
<---------
ANAC58
<---------
ARR14(2)
--------->
ARR14(2)
<------
NtERF2
--------->
RAP2.3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
At4g35610
<---------
RRTF1(1)
<---------
ATERF1(1)
<---------
DEAR4(2)
<---------
ORA47(2)
<---------
ERF1
------>
NtERF2
<---------
RAP2.3(3)
<---------
DREB2C(2)
<---------
RRTF1(2)
<---------
ATERF1(2)
<---------
RRTF1(3)
<---------
DEAR3(1)
--------->
At5g28300
--------->
DEAR3(1)
--------->
LBD16
<---------
RAP2.6(2)
<---------
ANAC46
<---------
RAP2.3(2)
<---------
At5g28300
<---------
RAP2.3(1)
<---------
WRKY38(1)
-------->
P
----->
MYB52(1)
<---------
LBD16
<---------
WRKY12
--------->
WRKY38(1)
--------->
At4g35610
-----
ARR14(2)
<---------
RAP2.3(1)
--------->
WRKY45
----------->
TGA1
>
TGA1
------->
GAMYB
--------->
ZAT2
--------->
WRKY12
<---------
ICU4
>
HVH21
--------->
MYB52(1)
--------->
WRKY18(1)
--------->
DOF5.7(2)
--------->
YAB1
---------->
GT1
--------->
At4g35610
<---------
MYB52(1)
--------->
ICU4
--
---->
ARR14(2)
<---------
RAP2.6(1)
--------->
At4g35610
------->
GAMYB
<---------
At4g35610
--
ANAC55(2)
<---------
ABI4(1)
<-----------
HVH21
--------->
GLK1(1)
--------->
MYB52(1)
<---------
ZAT2
--
ANAC46
<---------
At5g28300
<--------
ZAP1
<---------
GLK1(1)
<---------
MYB52(1)
<---------
ANAC55(2)
aacggttcaataacggcggcggaacttgctgggtcaatggctaaaatgggacatccgttgacttaccgtgaattaacggaaatgatgacggaagctgatt
9309000
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AGI:
At3g25597.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26140.1)
Range:
from: 9307159
to: 9308003
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At3g25600.1
Description:
calmodulin, putative. similar to calmodulin, putative [Arabidopsis thaliana] (TAIR:AT1G18530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67981.1); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 9308491
to: 9309204
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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