Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ARR11(3)                                             <---------------AGL15                                           --------->AHL20(2)                      <---------ANAC46 ------AHL20(2)                            <---------AHL20(2)                      <---------ANAC58 ---->AHL20(2)                        <---------ATHB12               ------->GAMYB <---------ANAC58 -----AHL20(2)   <-----------GT1      <---------YAB1               <---------At4g35610 ->ATHB12  <----------DOF2          ------>ZmHOX2a(1)      --------->ATHB12      <-----------GT1 >ICU4     <---------DAG2       <-----------GT1<---------CCA1(2)   --------->At4g35610   aaatgatgttcaacttttttttcaaactcaaaattttcctatcatttatatatctagcaattcatttgcaactgaaatgtttttttcgtgtcaaactcta  9143600                      ------>MYB46(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                      ------>MYB83                     ----------->RAV1(1)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              --------->ANAC46                        <---------AHL20(2)                          ---           --------->ARR14(2)                      --------->AHL20(1)                         <------           <---------ARR14(2)                      <---------AHL20(1)                         -------         --------->LBD16--------->YAB1          --------->YAB1                     <----------DOF2---        <---------ANAC55(2)                     --------->AHL20(2)        <---------AHL20(2) -------- ----------------------->TaNAC69(2)        --------->AHL20(2)            --------->AHL20(2)  <-------   ggtttgaaacccgtatacatcaccaacaataactagagtttgaaatcaaataatattttttcatatataaaacaatttaaaatttcttttagataattaa  9143700                              --------->ATHB12                            <---------WOX13(1)                            <--------P                                            <---------MYB52(1)                           <-------GAMYB                                       --------->MYB46(3) ------>AHL20(2)       <---------At4g35610                               <---------ICU4 ---AHL20(2)           --------->At4g35610                               --------->YAB1      -------- -->AHL20(2)           --------->ZAT2                                   <---------ATHB12     -------- ------>YAB1           <---------ZAT2 <---------AHL20(2)              --------->YAB1         -------- ->ICU4              <-----------RAV1(2)                           --------->TOE2(3)   --------->AHL20(2) --YAB1 ----------->HVH21 <---------MYB46(3)             <------ZmHOX2a(1)  --------->MYB46(3)   taaaaaatgtatgacacacagacacagctggttgatttgtttatttgaatttttgactaggattaagaacattaatcatcaaccgttgattatataagca  9143800                                                          <----------DOF2                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                        <-----------GT1               <---------ARR14(2)                       ------                     <---------ARR14(2)               <---------ARR11(3)                   --------->DEAR3(1)                     --------->ARR14(2)               --------->ARR11(3)                 ------>NtERF2        --------->DAG2 <-------TEIL                   --------->ARR14(2)                --------->ANAC46        <---------------AtSPL3                      ----------->ARR10                  --------->At4g35610        <---------------AtSPL8                  <---------ANAC55(2)                    <---------At4g35610      ---------->DOF2<---------GLK1(2)          --------->ANAC55(2)                  ---------->CDC5 ->ANAC58        <-------TEIL              ----------->GT1------>ZmHOX2a(1)         <-------TEIL ->ANAC46    --------->ANAC58              <---------ANAC58                     <---------TOE1(3) ->ANAC58    --------->ANAC58              <---------ANAC58       <----------DOF2  <-----------HVH21   agttgaagaaaaggcacggttcagattcacctcttctcatatgatgcgttacataagatcctttccctctttccctcattttcaggttcagcgccatcgt  9143900                                                     --------->ARR14(2)                                                     <---------ARR14(2)                      <---------AHL20(2)         <------NtERF2                      --------->AHL20(2)        --------->LBD16                 <------ZmHOX2a(2)              ------>NtERF2              <---------ETT(2)                 <---------ATERF1(2)           <---------MYB46(3)                  --------->ATERF1(2)          <---------RAP2.6(2)                  --------->DEAR3(1)          <---------DREB2C(2)                 <---------LBD16          <---------ANAC58                   <---------RAP2.3(1)             --------->ZAT6      ----          <---------ANAC58              --------->ARR11(3)                 <-----------GT1       <---    <----------DOF2   <---------AHL20(1)<---------ARR11(3)       --------->LBD16          <---------YAB1 --->TOE2(3)<-------GAMYB        --------------------->WRI1     --------->ANAC46         <-----------GT1   caaaaacttttggcggtcgatcaaaaaatttcgaaatttgaagatttcgccggcaaatacacaaacccgaaaatgaataacacttcaaaattttcattac  9144000                          ------>ZmHOX2a(2)                          ==================HOX2a_HOX2a                         ===================HOX2a_HOX2a                         --------->GLK1(1)                         <------ZmHOX2a(2)                        <---------ARR14(2)                        <---------ARR11(3)                        --------->ARR11(3)                        --------->ARR14(2)                        --------->AGP1                        <---------AGP1                       <---------CCA1(2)      <---------ALFIN1                       <---------At4g35610  <---------ALFIN1      *TSS --------->AHL20(2)<---------CCA1(2)--------->ANAC46   ---------->DOF2 <-----------HVH21        --------->ANAC46                                     ---- ----->HSFB2a(2)<---------ARR11(3)   ------>ZmHOX2a(1)               <-----------GT1<-----------GT1 ------HSFB2a(2)--------->ARR11(3)  --------->TOE2(3)            <----------DOF2<----------DOF2  <---   cagaagaaagaaatcaaataccttcagatctctatcttcctcattcacacaccctctctctcttctccttttctctcttctccttttctctatctccctc  9144100                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                    <---------ANAC55(2)                  --------->YAB1                                    <---------ANAC58           --------->ARR14(2)                                      --------->MYB52(2)           <---------ARR14(2)     --------->DEAR3(2)            <-------GAMYB -------->P      <---------MYB52(1)        --------->ANAC58               --------->MYB52(2)<---------HSFB2a(2)     <---------SPL7           --------->MYB46(3)              <-------TEIL <---------At4g35610    <---------ANAC46 --------->YAB1  <------NtERF2       ---------->DOF2   --------->At4g35610    <---------ANAC58 <---------ICU4--------->DEAR3(1)<---------ARR14(2)   --------->ANAC58         <-    <---------ANAC58<---------ATHB12------>NtERF2    ------->TEIL<---------MYB52(1)               <-- ----------------->WRI1  --------->TOE2(3)           --------->GLK1(2)    --------->ANAC58    <------ -------DOF2   ------>ZmHOX2a(1)--------->ANAC58     --------->ARR14(2) ---------->DOF2      <-------   tttgttccgttcgcatcctctaatcatcgtcaacaagccgacgaagagagaaacgaatccaaagttcgttacttgaaagctacccagaagaattcaaatc  9144200                           <---------ZAT18                           --------->ZAT18             ------>ZmHOX2a(2)                           --------->ZAT14           <---------ARR14(2)     <----------DOF2       <---------ZAT14           --------->ARR14(2)                    --------->LBD16     <---------DAG2    ------>ZmHOX2a(2)             --------->ARR11(3)                   --------->ANAC58   <-------TEIL --------->ARR14(2)                   <---------AGP1                       --------->ANAC46 <---------MYB52(1)  --------->ARR11(3)              <---------ARR11(3)                   --------->ANAC55(1) --------TOE1(2)<---------ARR14(2)               <---------WOX13(1)                       --------->ANAC58 ---------RAV1(2)    <---------AGP1            --------->ATHB12          --------->HSFB2a(2) <------- -----ARR10===================HOX2a_HOX2a     <---------YAB1             <---------HSFB2a(2) -------- --CCA1(2) ------>ZmHOX2a(1)            <---------TOE2(3)      --------->GLK1(2)         <---------LBD16   tcaggtacttttcctgtggatttgatctgggcactgcttattagggatttgattggatctacaaaattctgccttctgggtgattcaatttcacggaaat  9144300                                              <---------ZAT2                                     <---------ANAC46                                     <---------ANAC58                                     <---------ANAC58                                    <-------TEIL                                 <---------ZAT2                                 --------->ZAT2                                 <---------HSFB2a(1)                                 --------->HSFC1(2)                       <---------DAG2                                 --------->HSFB2a(1)                      <----------DOF2          ---------->DOF2        <---------HSFC1(2)                 --------->ARR14(2)        <---------YAB1          <-----------ARR10                   <---------ARR14(2)        <---------TOE2(3)       ----------->ARR10               --------->ANAC46   <------ZmHOX2a(1)         --------->ANAC46 --------->At4g35610   --------->GLK1(2)  --------->ICU4            --------->HSFB2a(2)          <---------ARR11(3) --ARR14(2)                 <---------HSFB2a(2)          --------->ARR11(3) ->ARR14(2) ----------->GT1--------->ANAC46   <---------At4g35610  <---------GLK1(2)         <-------   ggtgaggattaagaaagtagaatcgttctacgcgaagcttcgtgagtcagctacttcattatcttcacagaatccacttttgatatttccttcaacatct  9144400                                                   <-------TEIL                                                  --------->ARR14(1)                                    <---------ARR14(2)                                    --------->ARR14(2)                       ----------->GT1           <---------GLK1(2)                      <---------TOE2(3)          <---------ARR14(2)                      <---------TOE1(3)--------->TOE2(3)               <---------ZAT18     <---------CCA1(2)                                         <-------          <----------DOF2   <---------YAB1    --------->YAB1                       <----------DOF2  <---------YAB1   <----------DOF2 --------->GLK1(1)          <---------YAB1 --------->ARR14(2)<----- --ARR11(3)    --------->ZAT18   --------->YAB1  --------->ARR14(2)         <---------CCA1(2)--------   gatgttgattcactttgtgcgcttaaggttattactcatatccttgaatcagattcgattcagtattcttgtttccctgtatcgtcttttttggagattc  9144500  Previous    Next  AGI:  At3g25099.1    Description:  unknown protein Range:  from: 9143790    to: 9143897    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g25100.1    Description:  CDC45 (CELL DIVISION CYCLE 45). similar to unnamed protein product [Vitis vinifera] (GB:CAO70033.1); similar to Os11g0128400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065635.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78533.1); contains InterPro domain CDC45-like protein; (InterPro:IPR003874) Range:  from: 9144006    to: 9146216    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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