Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------AHL20(2)                                        <---------AHL20(2)                                       <---------AHL20(1)           --------->At4g35610                                       --------->AHL20(1)      --------->YAB1                           <-----------GT1    --------->AHL20(2)    <---------At4g35610                      ----------->ARR10<---------AHL20(2)     <---------YAB1                        < ---DOF2         --------->ALFIN1      --------->AHL20(2)  --------->ICU4                   ---------   tttttatttcttagaagatgaggggagatttactatctaaataaaattttaaatgtttgtaagtattatgagctcaacaattttgtcaatagtgccacaa  8997000           <---------DAG2          <---------ANAC58                                                                      <----          <---------ANAC58                                                                      -----      <---------MYB52(1)                            --------->REM1(1)                           <----   <---------TOE2(3)                            <-----------HVH21                     <----------DOF2 <-----------GT1 ---------->ID1                ----------->GT1 --------->TOE2(3)      <---------DAG2< ---------AHL20(2)    <----------DOF2       ------------>MYB.PH3(1)          <---------CCA1(2)  ----- -->RAV1(1)<----------DOF2             ----------->GT1    <----------DOF2    ---------->ID1     -----   atttaaacgtttgctttttgtcttctttgaaaaatcaaatgctgaaaaactgttacatctctttttcttaaaaactcttgtctctctccttttccttctg  8997100 -----At4g35610 ---->At4g35610                                           ------>NtERF2 -----ZAT2                                               --------->ANAC46                           < ---------TOE2(3)      ---------->DOF2                 <---------At5g28300                       <--- ------>RAV1(2)  ---------->DOF2                       -------->P            <---------ZAT14<-------- ---->ZAT2    <---------------AGL15          <---------ICU4           ---------->DOF2      --------->YAB1   ctgaggtaattgaatgctgcaaagagaaagagaataacttaaacccaaaattacacttaccgccagaaaaaaaaaagagttcagtttaatctaacatatt  8997200                                                                                                <----                                                                                                -----                                                                                                =====                                                                                                <----                                                                                             <-------                                                                                             <-------                                                                                         <---------AHL20(2)                  <---------YAB1                                                         --------->AHL20(2)                 <---------AHL20(1)                                                     <---------AHL20(2)                 --------->AHL20(2)                                                     --------->AHL20(2)                 <---------AHL20(2)                      --------->MYB52(1)             --------->AHL20(1)       <---------YAB1 ----------->GT1                  --------->MYB46(3)               <---------AHL20(1) -----------GT1  --------->AHL20(1)            <---------ATHB12                     <---------AHL20(2) ------AHL20(2) --------->AHL20(2)         --------->AHL20(2)       ------->MYC3   <---------AHL20(2) -AHL20(1)      --------->YAB1             <---------AHL20(2)       <-------MYC3   --------->AHL20(2)   ttatacaatacaattgaattatattagtaaaaaaaaaacttccatataaatcatggaacaaactggaacacatgggctctcttattttaatttattttct  8997300                                               <-----------GT1                                           <---------AHL20(2)                                           ----------->TBP                                         --------->AHL20(2)                   ---------->DOF2                                        <---------AHL20(1)                ---------->DOF2                                        --------->AHL20(1)           <---------AHL20(2) ------DOF2                        ----------->TBP                  --------->AHL20(2) ---------->AGL15       <---------AHL20(2) --------->AHL20(2)   --------->AHL20(2) ==================================================================================================== -----------AGL15      --------->AHL20(2)----------->TBP        <---------AHL20(2)            <------ ----GT1              <---------YAB1   --------->AHL20(2)    --------->AHL20(2)              -------- --AHL20(2)<-----------GT1         <---------YAB1            --------->ATHB51*TSS            <-------   tttttgagggatttaaccatgtttattatatagttttataaatatatatataccatctctccataatttataaaatgaaagaaagagagagtcttcttgt  8997400                                --------->At4g35610                           <---------ICU4                                  <---------ARR11(3)          --------->MYB52(1)    <---------At4g35610                  <---------MYB59 ========MADS_MADS        --------->ICU4                     ----------->GT1 -----RAV1(1)            --------->ANAC55(2)       ------>ZmHOX2a(1) --------->TOE2(3)             -- ------->AGL15           <---------ANAC55(2)--------->ARR14(2)       --------->TOE1(3)      --------- --------AGL15     <---------TOE2(3)     <---------ICU4  ---------->DOF2   --------->ARR11(3)     ---   tggagtaaacccaaacggttttagattacttattagctgttcatcagttcttcctctctaaaagagtaaaacctaaacatctctctctgttctattagaa  8997500                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                          <-----------ARR10                                          --------->AGP1                                          <---------ARR14(2)                                          <---------ARR11(3)                                          --------->ARR11(3)        <---------ATHB12                  --------->ARR14(2)       ------>MYB83                      <---------CCA1(2)                               --------->At4g35610 -------->DOF2                   --------->ARR14(2)                              <----------DOF2  --- >YAB1 ------>MYB46(1)           <---------ARR14(2)                     <---------YAB1   ----------->RAV1(2) ------>TOE1(2)               <---------ANAC46     ----------->GT1  <----------DOF2      <---------At4g35610   ccaaagaccaatctttgtgaacaaaacacatctcgtatacttcagatctagactcgaaaattttagacctctttacaattggtctttgttcatctgaagt  8997600                          <----------DOF2                         ===============================HOX2a_HOX2a                         ------>ZmHOX2a(2)                         ============================HOX2a_HOX2a                        =============================HOX2a_HOX2a                        ================================HOX2a_HOX2a                        <------ZmHOX2a(2)                        <---------RVE1(1)                       <---------ARR14(2)                       <---------ARR11(3)                       --------->ARR11(3)                       <---------ARR11(1)                <----------DOF2                       <-----------ARR10             <---------CCA1(2)                       --------->ARR14(2)        ------>ZmHOX2a(1)                      <---------ARR14(1)      ------>ZmHOX2a(1)                      <---------CCA1(2)     ------>ZmHOX2a(2)             --------->TOE2(3)                  <-----------HVH21        <------ZmHOX2a(2)              --------->TOE1(3)                <---------AtMYB61          =============HOX2a_HOX2a       <---------DAG2       ------            <---------At4g35610           <---------ARR14(2)           <-----------GT1  <----------DOF2            --------->At4g35610           --------->ARR14(2)    <---------AHL20(2)   <---------ARR11(3) -------->GT1   --------->MYB59      <----------DOF2 ---------->ID1 --------->YAB1   --------->ARR11(3)   tggagaaaatagttagcttaggtcggatcttttcatatgctttggatcctccttcgtctcttttgtataattttaaccttatcaagagttctttttgaat  8997700                                                                       <-------TEIL                                                                      --------->CCA1(2)                                                                      --------->ARR14(1)                                                                     <---------GLK1(2)                                                                     <---------ARR14(2)             <                                                                     --------->ARR11(1)  <------MYB46(1)                                                                     --------->ARR14(2)  <------MYB83                                                            ----------->GT1             --------->MYB59 ---------->DOF2        ----------->GT1                  <-----------RAV1(1)--------->YAB1      <---- ->TEIL--------->AHL20(2)          ------->TEIL         <---------TOE2(3)  <---------YAB1<---------ANAC46   ctcaaaagattatatagtagtatagaaggtttatatgtatatgtatagccagatagtttatgttgtttaaagattcgatgatagccaagttgggttaact  8997800                                            --------->SPL7                                          <---------SPL7                                          <---------SPL1(2)           <-----------GT1    <---------AHL20(2)      <---------ANAC58                  --------------->AtSPL8    <---------DAG2  ------>MYB83      <---------ANAC58                  --------------->AtSPL3    <----------DOF2 ------>MYB46(1) ----------DOF2------>ZmHOX2a(1)  --------->ARR14(2)        --------->TOE1(3)    --------->WOX13(1) ------DOF2 ------>NtERF2         <---------ARR14(2)        --------->TOE2(3)   --------->AtMYB61   ttctttttccttgcctccttactcacatacaaaccctatctgtccgtacaaaatactaaaaaccctaacttttctctctccaccaatctagtttattgtt  8997900  Previous    Next  AGI:  At3g24650.1    Description:  ABI3 (ABA INSENSITIVE 3); DNA binding / transcription activator/ transcription factor. Identical to Abscisic acid-insensitive protein 3 (ABI3) [Arabidopsis Thaliana] (GB:Q01593); similar to FUS3 (FUSCA 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G26790.1); similar to ABI3 [Populus trichocarpa] (GB:CAA05921.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 8997377    to: 9001070    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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