Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ZAT2             <---------ZAT14<---------At4g35610             --------->ZAT14<---------ZAT2                                                      <----             <---------At4g35610                                                             --------        <---------TGA1a     --------->At4g35610--------->ANAC58                              <-------      <---------ALFIN1<---------ALFIN1         --------->ANAC58                        --------->LBD16 -->ZmHOX2a(1)   ----------->HVH21             --------->ANAC46                       <---------LBD16 ----GT1--------->TGA1a --------->ANAC46   <-----------GT1--------->YAB1             <---------LBD16   ttcttcacacacttgagcagtgacacactcagctacaaatcgaagtaacaagtcactcactcatcaaactaatcggttcaatttctatccgggagtattt  8725700                                                                                         ------>ZmHOX2a(2)                                                                                        --------->CCA1(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR14(2)                                                                                       <---------ARR11(3)                                                                                       <---------AGP1                                                                                       --------->AGP1                                                                                       <---------ARR14(2)                                                                              --------->ANAC58                                                                              --------->ANAC46                                  --------->ALFIN1                          --------->TOE1(2)  <------ZmHOX2a(2)               <---------ANAC58   --------->TOE1(3)    <------ZmHOX2a(2) <-----------HVH21                <---------ANAC46   --------->TOE2(3)   <---------ARR14(2) -------GT1               <------NtERF2            ------->TEIL     <-----------GT1    --------->ARR11(3) ->ARR14(2)     <---------SPL7    <---------ANAC58 -------->P  <----------DOF2--------->ANAC58 --ARR14(2)  --------------------->WRI1  ----------->GT1---------->DOF2  --------->ARR14(2)     <----   tccgatcagcgagttcgatgtacgagtcgccaaatggtgtggaaagaaaaatcaaccttaaaactctttttaaccgatccaaggaaacagatctgaagct  8725800                                                                     <---------YAB1                                                                    <-----------HVH21                                                                    <-----------TGA1                                                             --------->YAB1                                                             <---------ICU4                                   --------->At4g35610  <-----------TGA1             <---------MYB46(3)                                   <---------At4g35610 --------->ANAC46      <---------HSFB2a(1)                        <---------ANAC58      ----------->HVH21 <---------ICU4     <---------MYB52(1)                        <---------ANAC58     <-----------HVH21 <---------YAB1<---------GLK1(1)                        <---------ANAC46    --------->ANAC46<---------YAB1  --------->GLK1(2) ------DOF2         --------->ARR11(3)   --------->MYB52(1) --------->ICU4 <---------GLK1(2)   ttgaagctctgaatcgtttggagatttcgtctacttgagctcataccggtcacatctccgtcatcatcatcgtcatagaatctccgattgttgtctccat  8725900         --------->HSFC1(1)         <---------------AGL15         <---------HSFC1(1)         --------->HSFB2a(2)         <---------HSFB2a(2)         --------------->AGL15        <-----------------AGL1        <-----------------AGL2    ------>NtERF2  *TSS    <---------At4g35610                 <---------PCF5   --------------->AGL15               ----------->HVH21   <---------------AGL15              <---------HSFB2a(2)  <-----------------AGL2              --------->HSFB2a(2)  ----------------->AG               <---------LBD16  <-----------------AGL1        ----------->ARR10           ------->TEIL  <---------RAP2.6(2)         <---------ANAC46           <---------MYB52(2)         <-----------GT1  ----------------->AGL1      <---------ANAC58     ----------->TBP                --------->YAB1  <-----------------AG        <---------ANAC58   <----------DOF2                 <---------YAB1     -   cgttgccgcttctggaaatggaaatggaaatggtgtgattcgggaccgcttctttaaaaacgaaccagttttgtgatttgtctattatacccctatttgt  8726000                                     <---------ANAC46                                  ------->GAMYB                                  <-----------RAV1(1)                                 <------------AtMYB77                                <---------At4g35610            --------->LBD16--------->LBD16      <-        <---------MYB52(1)      --------->At4g35610          <---------LBD16<---------LBD16       ---   ------->GAMYB             <------NtERF2            <-----------GT1     --------->MYB52(1)      <--   <-----------RAV1(1)     --------->ETT(1)       <----------DOF2         <-----------GT1       -----  <------------AtMYB77    --------->RAP2.6(3)    <---------ANAC58   ----------->GT1             ----- -------->MYB52(1)      <-----------RAV1(1)      <---------ANAC58 <------------CBF       ----------->GT1   actaactgtcgtttttttttttttttttgtcggcaactgtcgtttaatatggctttttactaaaccggaattgaaataaccgggttttgaacagataata  8726100            ------>NtERF2                                                            ================        --------->ANAC58                                                             --------->TGA1a        --------->ANAC58                                   <---------ARR14(2)        ================        --------->ANAC46                  <---------WOX13(1) <-------TEIL            <---------TGA1a --------AHL20(2)                       --------->ATHB12   --------->ARR14(2)  <---------ARR11(3) ------>AHL20(2)                       <---------YAB1      <---------GLK1(2)   --------->ARR11(3) -------AHL20(2)             *TSS    <----------DOF2--------->GLK1(1)       <-----------GT1 ---->TOE2(3)   <---------MYB52(1)--------->ZAT6    <---------GLK1(1)     --------->AHL20(2)        - ---->YAB1 <---------ALFIN1<---------ANAC46  <---------GLK1(2)       ------>ZmHOX2a(1)              <   ttaatttcaaacgacaccgttttggagttgtgtctaacactttgattgattctgaaatctggattcgtctcctccattaaacatctctcgtctgataaca  8726200             <----------DOF2         <----------DOF2     <---------CCA1(2)    <---------ETT(2) <------ZmHOX2a(2)        --------->WRKY38(1)                --------->ARR14(2) ===================bZIP_DOF                                 <---------ARR14(2) ===================bZIP_DOF                        <----------DOF2<---------MYB46(3)               < -------->ARR14(2)      --------->LBD16 ---------->DOF2   --------->ANAC55(2)               --------- ---------ARR14(2)      <-----------HVH21      ---------->DOF2     <-----------RAV1(1)      ---------   ccgatccatctctttctttctctctccgtcgactctcgttcttaaagatgaaagctttctacgtattcgttgttgctcttcttctcaccttgaattatag  8726300                                          <---------ANAC58                                          <---------ANAC46                                          <---------ANAC58                                  --------->ANAC58                                  --------->ANAC46                  <----------DOF2                                  <---------ANAC55(2)           ----------->HVH21                                  --------->ANAC58             ------>ZmHOX2a(2)                     ----------------------->TaNAC69(2)       <---------At4g35610                    <---------ANAC58  --------->GLK1(1)       --------->At4g35610                 ---                    <---------ANAC46 <---------ARR14(2)      <---------AGP1                     <---- --------->MYB52(2) <---------ANAC58 --------->ARR14(2)      ------->TEIL                --------->ANAC58 -------TEIL   <---------ANAC58   --------->ANAC55(2)        --------->ARR14(2)          --------->ANAC58 >ATHB12       <---------ANAC58  <---------LBD16             <---------ARR14(2) <---------ARR14(2)<-- >YAB1   ---------->ID1       --------->DOF5.7(2)       <---------bZIP60(2)  <---------ANAC46  ------   ggttcgtttttgttccttcgtgtcttgctctcgtttacggaattgcttgtatgtaatgacatggatctgacttttgtttgtgtatagggagaagcaagtg  8726400                                 --------->ARR11(3)                                 --------->ARR14(2)                                 --------->ARR14(3)                                 <-----------ARR10                                 <---------ARR14(3)                             --------->YAB1                            <---------ATHB12                          <---------ANAC58                         --------->MYB46(3)                           <---------ANAC58                     ------>ZmHOX2a(2)                              <-----------GT1                    <------ZmHOX2a(2)                          <---------YAB1                   <---------ARR14(2)                          --------->ICU4          --------->ATHB12--------->WOX13(1)                   <---------ATHB12 ------>ARR14(2)   ------->TEIL  <---------ARR11(3)       ----------->GT1               <---------WRKY18(1) -----MYB46(3)     --------->ARR14(2)          <------ZmHOX2a(2)--------->ATHB12 <---------ANAC46 -------ARR14(2)<---------WOX13(1)            <---------ARR11(3)<---------ICU4   --------->ALFIN1 --->ALFIN1 <---------WOX13(1)   <---------ARR14(2)      --------->MYB59---------->ID1 ----------->HVH21   gttctgttttcttcattgatggatccaacaatcaatatcttcgtccacgatcatccagtgaggtaatgattttcgtcccaaatgtgtggatgaccgattt  8726500                                              --------->HSFB2a(2)                                              --------->HSFC1(1)                                   <-                                              <---------HSFB2a(2)                                  <-                                              <---------HSFC1(1)                                  <--                                             <---------LBD16                                      ---                                           <---------ARR14(2)                             ------>ZmHOX2a(2)                                        ------>ZmHOX2a(2)                                <------ZmHOX2a(2)                              --------->WOX13(1)       <-----------GT1                  --------->ARR11(3)                     <---------AHL20(2)<------ZmHOX2a(2)                                <---------ARR11(3)                    --------->AHL20(2)<---------ARR11(3)        <------MYB83 ----------->GT1   ------                 <---------ICU4       --------->ARR11(3)        <------MYB46(1)         --------->AGP1     --------->TOE2(3)     <-----------GT1 --------->ARR14(2)  --------->MYB59          <---------AGP1   gaaataatctcaaatttgatcattttatatttcaatctaagatcgtttctggaaattatacgagtttggtccattgaagtagtaaaataagatctattgt  8726600  Previous    Next  AGI:  At3g24150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32295.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65691.1) Range:  from: 8724166    to: 8725919    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g24160.1    Description:  PMP (PUTATIVE TYPE 1 MEMBRANE PROTEIN). similar to unnamed protein product [Vitis vinifera] (GB:CAO43558.1) Range:  from: 8726129    to: 8729396    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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