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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ARR11(3)
--------->
YAB1
---------->
DOF2
<------
NtERF2
----->
NtERF2
---------
RAP2.6(3)
-------->
LBD16
------->
RRTF1(3)
------->
RRTF1(2)
------->
RAP2.3(2)
------->
ATERF1(2)
------->
DEAR3(1)
------->
RAP2.3(3)
--------
ATERF1(2)
------->
RAP2.6(2)
----
NtERF2
------>
ATERF1(1)
------>
RRTF1(1)
------>
ORA47(2)
------>
DEAR3(2)
------>
RAP2.3(1)
<------
ZmHOX2a(1)
<---------
ARR11(3)
------>
ERF1
<---------
TOE2(3)
--------->
ARR11(3)
------
At4g35610
<---------
TOE1(3)
<---------
GLK1(1)
------
ATERF1(1)
<---------
TOE2(3)
--------->
GLK1(1)
----->
At4g35610
<---------
MYB52(1)
<---------
MYB46(3)
------
RAP2.3(1)
--------->
DOF5.7(2)
<---------
ANAC46
*
TSS
-
---->
ARR14(2)
<-------
GAMYB
<------
ZmHOX2a(1)
<---------
AtMYB61
------------>
CBF
<
-----
ARR14(2)
<---------
MYB46(3)
<---------
LBD16
<----------
DOF2
<----------
DOF2
<-------
gccgccaaagataaccaagaggtcgttaaggctaaggagaccaggaagaggctatatgctttggtggatatcat
cttttgttt
gtatcaatatttgtgtg
8692700
<---------
AHL20(2)
------>
ZmHOX2a(2)
--------->
AHL20(2)
--------->
ARR11(3)
<-----------
TBP
<---------
ARR11(3)
---------->
DOF2
<---------
ICU4
--------->
ICU4
--------->
YAB1
--------->
ATHB12
--------->
YAB1
<---------
ICU4
<--------
HAHB4
<-----------
TBP
<---------
YAB1
--
<---------
ATHB12
<---------------
AGL15
--------->
ICU4
<-
--------->
WOX13(1)
--------------->
AGL15
<---------
ICU4
--
<-----------
GT1
<-----------------
AGL3
--------->
YAB1
--------->
CCA1(2)
<-
-------->
AHL20(2)
----------------->
AGL3
--------->
ANAC55(2)
---
---------
AHL20(2)
----------------->
AGL2
<---------
YAB1
--------->
YAB1
----------->
GT1
--
ANAC46
--------->
ANAC46
<-----------------
AGL2
<-----------
GT1
<---------
YAB1
---------->
DOF2
<--
aattaatcatttatataagaaacttatttgactcccatatatagtaatgatctaattaccatacataattatcaaaaagatagaaaaagagtcaaaatca
8692800
<---------
AHL20(2)
<---------
AHL20(2)
<------
MYB46(1)
--------->
AHL20(2)
<---------
ZAT14
<---------
ANAC46
---
----------->
GT1
--------->
ZAT18
<---------
MYB46(3)
--------
------->
AHL20(2)
--------->
ZAT14
--------->
MYB111(2)
---
--------
AHL20(1)
<---------------
AtSPL8
--------->
MYB59
<-------
------->
AHL20(1)
---------->
DOF2
--------->
AHL20(2)
--------->
MYB46(2)
--------
--------
AHL20(2)
--------->
TOE2(3)
<---------
AHL20(1)
--------->
MYB111(1)
<--
------>
AHL20(2)
<---------
GLK1(2)
--------->
AHL20(1)
<---------
ZAT6
--------->
AHL20(2)
-------
ATHB12
<---------
AHL20(2)
--------------->
AtSPL8
<-----------
GT1
<------
MYB83
--------->
YAB1
ataaattagtaactaaattaaaaactgattcttaaagagtactctaattaattagagagaaatttacaaactagtgtttggtagactattaaaaataaaa
8692900
--------->
ANAC46
<-
------->
TEIL
---------->
DOF2
<-
------>
AHL20(2)
--------------->
AGL15
<-
->
AHL20(2)
<---------------
AGL15
<------
ZmHOX2a(1)
<-
------>
AHL20(1)
================================================================
--
AHL20(2)
----------------->
AGL3
----------->
GT1
<-
->
AHL20(1)
--------->
GLK1(2)
--------->
ATHB12
<----------
DOF2
-
-------
AHL20(2)
<-----------
GT1
<---------
GLK1(2)
<---------
YAB1
<---------
YAB1
--
taaaatgaatcaacaccatttttcattctcttcaagaatcccattaaaagtcaaaaccatgtttgggctaggaaaaatatgtttgggctttagtaggccc
8693000
<-------
GAMYB
--------->
At5g28300
--------
<---------
DEAR3(2)
<-------
<---------------
AGL15
------------>
MYB.PH3(1)
<-------
------->
GAMYB
--------->
ICU4
<---------
ARR14(2)
--------
<-----------
GT1
<---------
YAB1
--------->
ARR14(2)
<---------
YAB1
-------->
P
----------------->
AGL3
<---------
YAB1
----------->
GT1
*
TSS
--------
MYB111(2)
----------->
GT1
<---------
MYB46(3)
<---------
AHL20(2)
<---------
ARR11(3)
--------
MYB55(2)
<---------
DOF5.7(2)
----------->
GT1
--------->
AHL20(2)
--------->
ARR11(3)
--------
MYB46(2)
--------->
MYB52(1)
<---------
DEAR3(1)
----------->
TBP
<---------
AHL20(2)
--------
MYB52(2)
------------>
MYB.PH3(1)
<---------
AHL20(2)
--------->
AHL20(2)
=============================
MADS_MADS
------------>
AtMYB77
<---------
ICU4
<---------
AHL20(2)
--------
MYB111(1)
--------->
DAG2
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
------>
GAMYB
--------------->
AGL15
--------->
TOE2(3)
--------->
ANAC55(2)
--------->
AHL20(2)
------->
MYB46(3)
---------->
DOF2
<--------
HAHB4
<---------
ANAC55(2)
<---------
AHL20(2)
<----
aactacccaaaataaccacataaagtaaacggttatcattaatgggcggttactaatacttaataaatataaatatagttaaattaatatc
atttctaga
8693100
<----------
DOF2
<---------
ANAC58
<---------
ANAC46
------>
NtERF2
<-----------
GT1
<---------
DEAR3(1)
<---------
ICU4
--------->
DEAR3(1)
------>
ZmHOX2a(1)
----------->
HVH21
--------->
TOE2(3)
--------->
RAP2.3(1)
---------
--------->
YAB1
<---------
ATERF1(1)
<--------
->
HSFC1(1)
--------->
LBD16
<---------
LBD16
--
HSFB2a(2)
--------->
DEAR3(1)
--------->
ARR14(2)
--
HSFC1(1)
<---------
MYB52(1)
<------
NtERF2
<---------
ARR14(2)
->
HSFB2a(2)
<----------
DOF2
<---------
ARR14(2)
<---------
LBD16
<-----------
GT1
-----
ARR11(3)
<---------
DAG2
--------->
ARR14(2)
<-----------
GT1
<---------
ANAC58
<-----
gcttatcctaatttctctccctttcgaaaatcgaaacaaatcggtgcgattactccgttttgaatttcaccggcgacgatggctttgaacaatccgcgaa
8693200
--------->
ANAC46
--------->
ARR11(3)
<---------
SPL7
<---------
ARR11(3)
--------->
DEAR3(1)
--------->
RVE1(1)
--------------->
AtSPL8
--------->
GLK1(1)
--------------->
AtSPL3
<---------
GLK1(1)
------->
GAMYB
--------->
LBD16
<---------
RVE1(1)
--------->
MYB46(3)
<---------
DOF5.7(2)
--------->
ARR11(3)
------>
MYB83
--------->
ARR14(2)
--------->
TOE2(3)
--------->
ANAC46
--------->
At4g35610
--------->
HSFB2a(2)
<---------
ANAC58
<------
MYB83
<---------
LBD16
<---------
TOE2(3)
------>
MYB46(1)
<---------
ARR14(2)
<-----------
HVH21
>
LBD16
<---------
ARR11(3)
<---------
At4g35610
<---------
HSFB2a(2)
<---------
ANAC55(2)
<------
MYB46(1)
-
HSFB2a(2)
<---------
DAG2
--------->
MYB46(3)
--------->
DOF5.7(2)
<----------
ID1
---------
OsCBT
<----------
DOF2
------->
TEIL
--------->
SPL7
<---------
ANAC58
---------->
DOF2
gaacacggagatatctcgctttaggtttagccgatgaaccaatcgccgtaccagaaaccgtttacgctcaagtccgtgagaaaaaacgtcaaagcttggt
8693300
--------->
ZAT14
<---------
ZAT14
------>
ZmHOX2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(2)
<---------
AGP1
--------->
ARR11(3)
<---------
TOE1(2)
--------->
ARR14(3)
<---------
TOE2(2)
--------->
ANAC58
<---------
ARR14(3)
<---------
LBD16
<-----------
HVH21
<---------
ARR11(3)
--------->
ALFIN1
------->
TEIL
--------->
ARR14(2)
<---------
AtMYB61
<---------
YAB1
<----------
ID1
<---------
ANAC58
--------->
CCA1(2)
<---------
HSFB2a(2)
------>
ZmHOX2a(2)
<---------
ANAC58
--------->
ARR14(2)
--------->
HSFB2a(2)
----------->
HVH21
<---------
ANAC46
<---------
ARR14(2)
<
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ATHB12
<------
ZmHOX2a(1)
--------->
ANAC58
ttgtcgagttcttagccctagaagacaagatctctactctgtgatcgataaactccgtcttgagtggtgtctcggaggatatgaatgtcatggacgcatt
8693400
<-----------
HVH21
<------
NtERF2
--------->
LBD16
------>
NtERF2
<---------
ANAC46
<------
NtERF2
<---------
LBD16
--------->
ATERF1(1)
<---------
ORA47(2)
<---------
ERF1
<---------
RAP2.3(1)
<---------
DEAR4(2)
<---------
ATERF1(1)
------>
NtERF2
<---------
RAP2.6(1)
<---------
RRTF1(1)
<---------
DEAR3(1)
--------->
ATERF1(2)
------>
ZmHOX2a(1)
<---------
ATERF1(2)
<------
MYB46(1)
<---------
RAP2.6(2)
<------
MYB83
<---------
RRTF1(3)
--------->
MYB111(1)
<-------
<---------
RRTF1(2)
<---------
MYB46(3)
<---------
MYB52(1)
--------->
DEAR3(1)
--------->
MYB59
<-------
GAMYB
<---------
RAP2.3(3)
<---------
AtMYB61
<---------
ANAC58
<---------
RAP2.3(2)
---------->
DOF2
<--------
P
<---------
MYB46(3)
<---------
LBD16
---------->
DOF2
<-------
GAMYB
------->
MYC3
<---------
ANAC58
<---------
ABI4(1)
<---------
ANAC58
--------->
MYB55(2)
<---------
WOX13(1)
<--
--------->
ATERF1(1)
<---------
ANAC46
<---------
MYB46(3)
<---------
MYB46(3)
---
---------
RAP2.3(1)
<---------
ANAC58
<----------
DOF2
<-------
MYC3
<---------
ANAC46
atcggcggcgggaagtgtcagttcgtgtttgagaaagagcgggatttagaaatggttctttggttggtccttacacgtttgatggatggctcgttgtgtt
8693500
<----
<----
<----
<---------
YAB1
<----
<---------
LBD16
-----
--------->
TOE1(2)
-----
<---------
MYB46(3)
--------->
GLK1(2)
--------
<-----------
RAV1(1)
<---------
GLK1(1)
---------
--------->
ATERF1(1)
<---------
ANAC46
<--------
<------
MYB83
<-------
GAMYB
<---------
TOE1(2)
<----------
DOF2
<---------
ORA47(2)
<---------
ANAC58
<---------
YAB1
<-----
<---------
At4g35610
<------
MYB46(1)
<---------
ANAC58
<-----------
ARR10
--------->
At4g35610
<---------
DEAR3(2)
<-------
TEIL
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ATERF1(1)
--------->
CCA1(2)
<---------
ARR11(1)
-
<---------
ARR14(2)
<---------
DREB2C(2)
--------->
ARR14(2)
--------->
GLK1(2)
<
----
RAV1(1)
------>
ZmHOX2a(1)
------>
NtERF2
--------->
ARR11(1)
--------->
ARR11(3)
<
-------
HSFB2a(2)
--------->
ARR11(3)
<---------
DEAR3(1)
<---------
ARR14(2)
<---------
ARR11(3)
<
-------------->
AGL1
<---------
ARR11(3)
<---------
DEAR4(1)
<---------
GLK1(2)
<---------
ARR14(2)
<-
gcagaaatgggaagatgagcaaggtcctgagtttttgaagtcggtgcct
atgtggttgaagattcgtgggattccgattcagtatctttgtgatgggacg
8693600
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AGI:
At3g24068.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24065.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:
from: 8692198
to: 8692683
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g24070.1
Description:
zinc knuckle (CCHC-type) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G13450.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878)
Range:
from: 8693092
to: 8694716
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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