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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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      --------->ARR11(3)
     --------->YAB1
  ---------->DOF2
<------NtERF2
----->NtERF2
---------RAP2.6(3)
-------->LBD16
------->RRTF1(3)
------->RRTF1(2)
------->RAP2.3(2)
------->ATERF1(2)
------->DEAR3(1)
------->RAP2.3(3)
--------ATERF1(2)
------->RAP2.6(2)
----NtERF2
------>ATERF1(1)
------>RRTF1(1)
------>ORA47(2)
------>DEAR3(2)
------>RAP2.3(1)                <------ZmHOX2a(1)                <---------ARR11(3)
------>ERF1                   <---------TOE2(3)                  --------->ARR11(3)
------At4g35610         <---------TOE1(3)                       <---------GLK1(1)
------ATERF1(1)         <---------TOE2(3)                       --------->GLK1(1)
----->At4g35610      <---------MYB52(1)                      <---------MYB46(3)
------RAP2.3(1)      --------->DOF5.7(2)                  <---------ANAC46        *TSS             -
---->ARR14(2)       <-------GAMYB       <------ZmHOX2a(1)<---------AtMYB61        ------------>CBF <
-----ARR14(2)      <---------MYB46(3)<---------LBD16   <----------DOF2 <----------DOF2      <-------
 
gccgccaaagataaccaagaggtcgttaaggctaaggagaccaggaagaggctatatgctttggtggatatcatcttttgtttgtatcaatatttgtgtg  8692700
       <---------AHL20(2)                      ------>ZmHOX2a(2)
       --------->AHL20(2)                    --------->ARR11(3)
       <-----------TBP                       <---------ARR11(3)        ---------->DOF2
   <---------ICU4                          --------->ICU4        --------->YAB1
   --------->ATHB12                      --------->YAB1          <---------ICU4
   <--------HAHB4                <-----------TBP                <---------YAB1                    --
  <---------ATHB12             <---------------AGL15            --------->ICU4                    <-
--------->WOX13(1)             --------------->AGL15          <---------ICU4                      --
<-----------GT1               <-----------------AGL3       --------->YAB1   --------->CCA1(2)     <-
-------->AHL20(2)             ----------------->AGL3       --------->ANAC55(2)                   ---
---------AHL20(2)             ----------------->AGL2  <---------YAB1--------->YAB1   ----------->GT1
--ANAC46     --------->ANAC46 <-----------------AGL2<-----------GT1<---------YAB1---------->DOF2 <--
 
aattaatcatttatataagaaacttatttgactcccatatatagtaatgatctaattaccatacataattatcaaaaagatagaaaaagagtcaaaatca  8692800
                                                                                      <---------AHL20(2)
                                            <---------AHL20(2)             <------MYB46(1)
              --------->AHL20(2)    <---------ZAT14                        <---------ANAC46      ---
   ----------->GT1                  --------->ZAT18                       <---------MYB46(3)--------
------->AHL20(2)                  --------->ZAT14                         --------->MYB111(2)    ---
--------AHL20(1)                <---------------AtSPL8                    --------->MYB59   <-------
------->AHL20(1)             ---------->DOF2--------->AHL20(2)            --------->MYB46(2)--------
--------AHL20(2)          --------->TOE2(3) <---------AHL20(1)            --------->MYB111(1)    <--
------>AHL20(2)        <---------GLK1(2)    --------->AHL20(1)        <---------ZAT6 --------->AHL20(2)
-------ATHB12 <---------AHL20(2)--------------->AtSPL8      <-----------GT1<------MYB83  --------->YAB1
 
ataaattagtaactaaattaaaaactgattcttaaagagtactctaattaattagagagaaatttacaaactagtgtttggtagactattaaaaataaaa  8692900
         --------->ANAC46                                                                         <-
    ------->TEIL                          ---------->DOF2                                         <-
------>AHL20(2)                      --------------->AGL15                                        <-
->AHL20(2)                           <---------------AGL15         <------ZmHOX2a(1)              <-
------>AHL20(1)                     ================================================================
--AHL20(2)                          ----------------->AGL3        ----------->GT1                 <-
->AHL20(1)                       --------->GLK1(2)      --------->ATHB12            <----------DOF2-
-------AHL20(2)  <-----------GT1<---------GLK1(2)      <---------YAB1      <---------YAB1         --
 
taaaatgaatcaacaccatttttcattctcttcaagaatcccattaaaagtcaaaaccatgtttgggctaggaaaaatatgtttgggctttagtaggccc  8693000
                                            <-------GAMYB
                                            --------->At5g28300                             --------
                                           <---------DEAR3(2)                               <-------
            <---------------AGL15       ------------>MYB.PH3(1)                             <-------
            ------->GAMYB      --------->ICU4<---------ARR14(2)                             --------
         <-----------GT1       <---------YAB1--------->ARR14(2)                      <---------YAB1
-------->P ----------------->AGL3 <---------YAB1                        ----------->GT1    *TSS
--------MYB111(2)         ----------->GT1  <---------MYB46(3)    <---------AHL20(2) <---------ARR11(3)
--------MYB55(2)       <---------DOF5.7(2) ----------->GT1       --------->AHL20(2) --------->ARR11(3)
--------MYB46(2)       --------->MYB52(1) <---------DEAR3(1)     ----------->TBP<---------AHL20(2)
--------MYB52(2)       ------------>MYB.PH3(1)              <---------AHL20(2)  --------->AHL20(2)
=============================MADS_MADS  ------------>AtMYB77<---------ICU4     <---------AHL20(2)
--------MYB111(1) --------->DAG2--------->YAB1             --------->AHL20(2)  --------->AHL20(2)
------>GAMYB--------------->AGL15--------->TOE2(3)    --------->ANAC55(2)   --------->AHL20(2)
------->MYB46(3) ---------->DOF2<--------HAHB4        <---------ANAC55(2)  <---------AHL20(2)  <----
 
aactacccaaaataaccacataaagtaaacggttatcattaatgggcggttactaatacttaataaatataaatatagttaaattaatatcatttctaga  8693100
                                                                               <----------DOF2
                                                                              <---------ANAC58
                                                                              <---------ANAC46
                                                                      ------>NtERF2
        <-----------GT1                                              <---------DEAR3(1)
     <---------ICU4                                                  --------->DEAR3(1)
    ------>ZmHOX2a(1)                                                ----------->HVH21
   --------->TOE2(3)                                                --------->RAP2.3(1)    ---------
  --------->YAB1                                                   <---------ATERF1(1)     <--------
->HSFC1(1)                                                         --------->LBD16       <---------LBD16
--HSFB2a(2)                                                       --------->DEAR3(1)   --------->ARR14(2)
--HSFC1(1)                                           <---------MYB52(1)<------NtERF2   <---------ARR14(2)
->HSFB2a(2)      <----------DOF2             <---------ARR14(2)  <---------LBD16   <-----------GT1
-----ARR11(3)   <---------DAG2               --------->ARR14(2)<-----------GT1<---------ANAC58<-----
 
gcttatcctaatttctctccctttcgaaaatcgaaacaaatcggtgcgattactccgttttgaatttcaccggcgacgatggctttgaacaatccgcgaa  8693200
                                                --------->ANAC46
        --------->ARR11(3)                 <---------SPL7
        <---------ARR11(3)                --------->DEAR3(1)
       --------->RVE1(1)                 --------------->AtSPL8
       --------->GLK1(1)                 --------------->AtSPL3
       <---------GLK1(1)               ------->GAMYB                   --------->LBD16
       <---------RVE1(1)              --------->MYB46(3)  <---------DOF5.7(2)
      --------->ARR11(3)             ------>MYB83        --------->ARR14(2)        --------->TOE2(3)
 --------->ANAC46           --------->At4g35610--------->HSFB2a(2)    <---------ANAC58       <------MYB83
<---------LBD16   <---------TOE2(3)  ------>MYB46(1)     <---------ARR14(2)        <-----------HVH21
>LBD16<---------ARR11(3) <---------At4g35610   <---------HSFB2a(2)    <---------ANAC55(2)    <------MYB46(1)
-HSFB2a(2)     <---------DAG2     --------->MYB46(3)    --------->DOF5.7(2)       <----------ID1
---------OsCBT <----------DOF2   ------->TEIL--------->SPL7           <---------ANAC58---------->DOF2
 
gaacacggagatatctcgctttaggtttagccgatgaaccaatcgccgtaccagaaaccgtttacgctcaagtccgtgagaaaaaacgtcaaagcttggt  8693300
                               --------->ZAT14
                               <---------ZAT14
                           ------>ZmHOX2a(2)
                          --------->GLK1(1)
                          <------ZmHOX2a(2)
                         <---------AGP1
                         --------->ARR11(3)                            <---------TOE1(2)
                         --------->ARR14(3)                            <---------TOE2(2)  --------->ANAC58
                         <---------ARR14(3)                        <---------LBD16<-----------HVH21
                         <---------ARR11(3)                 --------->ALFIN1    ------->TEIL
                         --------->ARR14(2)                 <---------AtMYB61<---------YAB1
                  <----------ID1                          <---------ANAC58 --------->CCA1(2)
              <---------HSFB2a(2)        ------>ZmHOX2a(2)<---------ANAC58--------->ARR14(2)
              --------->HSFB2a(2)    ----------->HVH21    <---------ANAC46<---------ARR14(2)       <
    <---------ARR11(3)   <---------ARR14(2)              --------->ATHB12<------ZmHOX2a(1)--------->ANAC58
 
ttgtcgagttcttagccctagaagacaagatctctactctgtgatcgataaactccgtcttgagtggtgtctcggaggatatgaatgtcatggacgcatt  8693400
            <-----------HVH21
      <------NtERF2
     --------->LBD16
     ------>NtERF2
    <---------ANAC46
   <------NtERF2
   <---------LBD16
   --------->ATERF1(1)
  <---------ORA47(2)
  <---------ERF1
  <---------RAP2.3(1)
  <---------DEAR4(2)
  <---------ATERF1(1)
  ------>NtERF2
  <---------RAP2.6(1)
  <---------RRTF1(1)
 <---------DEAR3(1)
 --------->ATERF1(2)                                              ------>ZmHOX2a(1)
 <---------ATERF1(2)                                         <------MYB46(1)
 <---------RAP2.6(2)                                         <------MYB83
 <---------RRTF1(3)                                         --------->MYB111(1)             <-------
 <---------RRTF1(2)                                         <---------MYB46(3)           <---------MYB52(1)
 --------->DEAR3(1)                                         --------->MYB59             <-------GAMYB
 <---------RAP2.3(3)                                        <---------AtMYB61        <---------ANAC58
 <---------RAP2.3(2)           ---------->DOF2             <--------P          <---------MYB46(3)
<---------LBD16              ---------->DOF2              <-------GAMYB ------->MYC3 <---------ANAC58
<---------ABI4(1)  <---------ANAC58                      --------->MYB55(2)   <---------WOX13(1) <--
--------->ATERF1(1)<---------ANAC46                      <---------MYB46(3)<---------MYB46(3)    ---
---------RAP2.3(1) <---------ANAC58                   <----------DOF2   <-------MYC3 <---------ANAC46
 
atcggcggcgggaagtgtcagttcgtgtttgagaaagagcgggatttagaaatggttctttggttggtccttacacgtttgatggatggctcgttgtgtt  8693500
                                                                                               <----
                                                                                               <----
                                                                                               <----
                                                                      <---------YAB1           <----
                                                             <---------LBD16                   -----
                                                             --------->TOE1(2)                 -----
                                                 <---------MYB46(3)--------->GLK1(2)        --------
                                              <-----------RAV1(1) <---------GLK1(1)        ---------
                                       --------->ATERF1(1)  <---------ANAC46               <--------
                                      <------MYB83<-------GAMYB<---------TOE1(2)  <----------DOF2
                                      <---------ORA47(2)    <---------ANAC58    <---------YAB1<-----
         <---------At4g35610          <------MYB46(1)       <---------ANAC58   <-----------ARR10
         --------->At4g35610          <---------DEAR3(2)   <-------TEIL        --------->ARR14(2)
--------->ARR14(2)                    <---------ATERF1(1) --------->CCA1(2)    <---------ARR11(1)  -
<---------ARR14(2)                   <---------DREB2C(2) --------->ARR14(2)    --------->GLK1(2)   <
----RAV1(1)            ------>ZmHOX2a(1) ------>NtERF2   --------->ARR11(1)    --------->ARR11(3)  <
-------HSFB2a(2)   --------->ARR11(3)<---------DEAR3(1)  <---------ARR14(2)    <---------ARR11(3)  <
-------------->AGL1<---------ARR11(3)<---------DEAR4(1)  <---------GLK1(2)     <---------ARR14(2) <-
 
gcagaaatgggaagatgagcaaggtcctgagtttttgaagtcggtgcctatgtggttgaagattcgtgggattccgattcagtatctttgtgatgggacg  8693600
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AGI:  At3g24068.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24065.1); contains InterPro domain Plant self-incompatibility S1 (InterPro:IPR010264)
Range:  from: 8692198    to: 8692683    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g24070.1   
Description:  zinc knuckle (CCHC-type) family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G13450.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878)
Range:  from: 8693092    to: 8694716    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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