Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <------MYB46(1)                  ----------->GT1                  <------MYB83                 <---------MYB46(3)                 --------->MYB59                 <---------AtMYB61                 --------->MYB46(2)               <---------MYB52(1)                                             --------->LBD16             <------MYB46(1)                                                 <---------ANAC46        <---------MYB46(3)                                                   <---------ANAC58       --------->ALFIN1                                                      --------->ANAC55(2) --------->ARR11(3)                                                          <---------ANAC58 --------ARR11(3)--------------->AtSPL3                                     <---------LBD16 ------->ARR11(3)--------->MYB111(1)               ------>ZmHOX2a(1)  --------->AHL20(2) --------AHL20(1)--------------->AtSPL8            <----------DOF2  <----------DOF2 ------->AHL20(1)<---------------AtSPL8          --------------->AGL15<---------AHL20(2) ->ANAC46    <------MYB83      <---------GLK1(1)---------->ID1      --------->TOE2(3) ->ANAC58   --------->MYB59 <---------YAB1     <-----------GT1   <-----------GT1----------->GT1 ->ANAC58<---------SPL7   --------->YAB1      <-----------GT1    <---------AHL20(2)   ---------->DOF2   atatatcatgtggttcggtttggtacaattttgatttctgctagggttttatcctttttagcaaaatttactttaatttccgtagtaaaaaagaagaagt  8648300                                      --------->AHL20(2)                                --------->ANAC46                                --------->ANAC55(2)                                <---------ANAC55(2)                                <---------RAP2.6(2)                                ----------->GT1    <------MYB46(1)    <---------ANAC58<---------AHL20(2)                        <---------WOX13(1)    ----------->GT1    <---------ANAC58--------->AHL20(2)--------->TOE2(3)    <---------YAB1       <-    <------MYB83 <---------YAB1--------->RAP2.6(3)     <---------AHL20(2)   --------->YAB1<----------   tttagttggtttatttcttatttttgcttcgattacggcatttaattttagcaatatttcattaacaaaaaaaaacaattctaattggtttatttctact  8648400                                                                                                  ---                                                                                                  <--                                                                                                  <--                                            --------->AHL20(2)                                    ---                                 <---------YAB1                                                   <--                                 --------->ICU4                                                   ---                   ------>ZmHOX2a(2)   <---------YAB1                                            <---        <---------ANAC58       --------->YAB1                     --------->YAB1                 ---- ---------DOF2   --------->ARR11(3) --------->ICU4               --------->AHL20(2)              <--- -GT1   <---------ANAC58    --------------->AGL15       --------->AtMYB61                 <----------   tctttttctgtcttggtttgatctctattactatattgattatgaaaaaaatatgaaaccaaaaccatttattatgtcttcaattccatttttaacccaa  8648500                                                                             ----------->GT1                                                                        --------->TOE2(2)   <-----------GT1                                                      --------->TOE1(2)   --------->ZAT6                                                  <---------MYB46(2) <-----------GT1                                                   --------->AtMYB61 ------>AHL20(2)                                                   <---------MYB59 ------HAHB4                                        --------->ANAC58   --------->MYB46(3) -------ICU4             <---------MYB46(3)         --------->ANAC58 ------>MYB83 ----->ATHB1--------->YAB1                 <-----------GT1         <---------MYB111(1) -------AHL20(2)   --------->MYB52(1)   --------->YAB1            --------->ANAC46 ------>ATHB51    <-----------GT1       <---------ICU4         --------->ARR14(2) ------ATHB51  --------->YAB1          <---------YAB1          <---------ARR14(2)               ----- ----->ICU4 ----------->GT1            --------->ICU4         <----------TaMYB80       ------>MYB83 ------ATHB12 <---------YAB1 <---------ZAT18        --------->ANAC46 ------>MYB46(1)   ------>MYB46(1) -GT1   <---------YAB1 <---------MYB52(1) <---------YAB1     ---------->TaMYB80   <-----------GT1   ttatttcactacaattgtaataaccggttattgcacccctaattataactatttaagcaatcgcatataccaaaccagcgagttaaaccaaattgtttcc  8648600           --------->ANAC46                                                         <-----------GT1    <---------YAB1                                    ------->TEIL                 <---------AHL20(2) <---------ATHB51             <-----------GT1        <---------CCA1(2)     ------>ZmHOX2a(1) ------------>AG       <-----------GT1          <-----------GT1            ----------->HVH21      ---   caaattatgctaaacgacagcgttttcacaaattaccaaaaaaacctatttttctgtatctatctgaattcagagtcctgaccattttatctcactctca  8648700                                         ------>NtERF2                                        --------->RAP2.6(2)                                        --------->ATERF1(2)                                        <---------ATERF1(2)                                        --------->RRTF1(3)                                        --------->RRTF1(2)                                        --------->RAP2.3(2)                                        --------->DREB2C(2)                             --------->ANAC46                                        --------->RAP2.3(3)                             --------->ANAC58                                        --------->DEAR3(1)                          --------->ANAC58                                       --------->ORA47(2)                           --------->ANAC58                                       --------->ERF1                               --------->AtLEC2                                       --------->RAP2.3(1)                       <------NtERF2                                       --------->DEAR4(2)                        <---------MYB52(1)                                       --------->RAP2.6(1)                      <-----------HVH21                                       <------NtERF2                            <-----------TGA1                                       --------->ATERF1(1)                      <---------RAP2.6(3)                                      <---------ATERF1(1)                      --------->bZIP60(2)                                      <---------RAP2.3(1)                      <---------bZIP60(1)                                      <---------RRTF1(1)                       --------->bZIP60(1)                                      ------>NtERF2                            --------->DEAR3(1)                                     <---------DEAR3(1)                        --------->RAP2.3(2)                                     --------->ANAC46                          --------->RRTF1(3)                                    <---------ZAT14                            --------->RAP2.3(3)                                    --------->ZAT14                            --------->RRTF1(2)                                <---------ALFIN1                              <------NtERF2                              --------->ANAC58                                --------->RAP2.3(1)                              --------->ANAC46                                --------->ERF1                              --------->ANAC58                                --------->RRTF1(1)                            <---------ALFIN1    <-----------GT1              ------>NtERF2                           <---------REM1(2)  ---------->DOF2         ------>ZmHOX2a(1) --------->ANAC58            *TSS          <---------ALFIN1<------NtERF2          <----------DOF2------>NtERF2 <------         <----------DOF2------>ZmHOX2a(1)--------->LBD16<----------DOF2  ------>ZmHOX2a(1) --------->RAP2.6(2) ------->DOF2          --------->ANAC46--------->RRTF1(1)   <-----------GT1 --------->ANAC46------>NtERF2   caaagtcttcacttttgaagtgtctcctccacacgcactgcgccgccaaaaaacccttctttaaaccctttcctcctcgcgccgtcatgcaagccaccat  8648800              <---------ALFIN1            <---------ALFIN1                                                                       --           <------NtERF2                                                                        -----         --------->ANAC58                                                                       -----         --------->ANAC46                                                               ------>NtERF2         --------->ANAC58                                                               --------->LBD16        ------->PIF5                                                                   --------->DEAR3(1)        <-------PIF5                                                                  --------->ATERF1(1)        ------->MYC3                                                                 <---------ATERF1(1)        <-------MYC2                                                       <---------ICU4       <----        ------->MYC2                                                       --------->YAB1--------->ANAC46        <-------MYC3                                                      <---------ATHB12   --------       --------->ANAC58                                            --------->SPL7  <---------ZAT2 ---       --------->ANAC58                                          <---------SPL7    --------->ZAT2----       --------->ANAC46                                          ------>NtERF2  ----------->RAV1(2)<-     <---------ALFIN1                               <-----------HVH21   --------->WOX13(1)   <-------    <---------REM1(2)                         --------->ANAC46   <-----------HVH21=================== ---ALFIN1------>NtERF2               ------>ZmHOX2a(1)         --------->DEAR3(1)------>ZmHOX2a(1)--   cttctctccacgcgccactctcttcccctgtaaacctctcctcccttcccacaatgtcaactctcgccgtccctcaatcatctcctgctccgcccaatcc  8648900         ------>ZmHOX2a(2)       <---------ARR14(2)       --------->ARR14(2)   <---------At4g35610   --------->At4g35610 --------->MYB46(3) <------------AtMYB77 ------->ARR14(2)         ----------->HVH21 ---->ANAC46           --------->ZAT6                                                       --------- ---->ANAC55(2)       <---------ATHB12                                                <---------PCF2 -----ANAC55(2)      ------>MYB46(1)                                                 <------MYB83 ->ARR14(2)     <---------ALFIN1                                                     <------MYB46(1) -------->HVH21--------->MYB46(3)                                                   <---------MYB46(3) ----->LBD16 --------->REM1(1)                                      ------->TEIL   --------->ALFIN1 --------ARR14(2)    <-----------HVH21              <---------At4g35610          --------->ZAT2 --ARR14(2)------>ZmHOX2a(1)                --------->MYB46(3)    --------->ZAT14<---------ZAT2 ===============HOX2a_HOX2a           --------->At4g35610  --------->YAB1 --------->ARR14(2)--------- ------->MYB52(1)    ------>MYB83  ---------->DOF2  --------->At4g35610   <---------ARR14(2)---------   gtaaccgctgatccttcaccacctatcactgacaccaataagctcaacaaatacagctcaagaatcactgaacccaaatcccaaggtgggtctcaagcaa  8649000                                                               <------MYB46(1)                                                          <---------MYB46(3)                                                          <---------DEAR3(2)                                                         <---------TOE1(2)                                                         <---------DEAR3(1)           <------MYB83                                  <---------TOE2(2)           <------MYB46(1)                     <------MYB83 <---------MYB52(1)       --------->ALFIN1                     <---------ARR14(2)<---------AtMYB61 <---------REM1(2)         <---------ARR14(2)  <------MYB46(1)--------->MYB59                 ------- >ANAC58   <---------MYB46(3)               <---------GLK1(2) --------->MYB111(1)         ------->TEIL >ANAC46  <---------AtMYB61--------->ARR14(2)<---------WOX13(1)<------MYB83             <-------TEIL >ANAC58 <--------P --------->At4g35610     --------->ARR14(2)--------->MYB46(2)       --------->AtLEC2   ttcttcacggtgttggtttatcagacgacgatttgctaaaaccccagattggtatctcgtcggtttggtatgaagggaacacttgtaacatgcatttgct  8649100                                                    <---------TOE1(3)                                                    --------->MYB59                                                    <---------TOE2(3)                                               <------MYB46(1)                                               <---------ANAC46                                               <------MYB83                                              <------MYB46(1)                                              <------MYB83                                            <--------P               <---------ANAC58                       <------ZmHOX2a(1)  <---------MYB46(3)         <---------ANAC46                ---------->DOF2           --------->ATHB12           <---------ANAC58              ----------->HVH21          <---------AtMYB61    <---------YAB1 -->At4g35610--------->At5g28300      <------ZmHOX2a(1)     --------->ZAT6   gaaattgtctgaggctgtgaaagaaggagttgaaaatgcaggaatggttgggtttaggtttaatactattggtgtgagtgatgctatttcgatgggaacg  8649200  Previous    Next  AGI:  At3g23940.1    Description:  dehydratase family. similar to hypothetical protein OsI_029236 [Oryza sativa (indica cultivar-group)] (GB:EAZ08004.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71581.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ64972.1); contains InterPro domain Dihydroxy-acid and 6-phosphogluconate dehydratase; (InterPro:IPR000581); contains InterPro domain Dihydroxy-acid dehydratase; (InterPro:IPR004404) Range:  from: 8648712    to: 8652612    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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