Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------>ZmHOX2a(1)                                                     --------->TOE2(3)                                                  <---------ARR11(3)                                           --------->YAB1                                           -------->HAHB4                 ---------->TaMYB80                                          --------->ICU4                <---------MYB52(1)                                         <---------TOE2(3)           <---------LBD16                                       --------->AHL20(2)           <---------At5g28300                   <-----------GT1     <---------AHL20(2)          <-----------GT1        <---------YAB1                <---------ICU4        --------->AHL20(2)     <---------TOE2(3)     --------->YAB1   < ----->DOF2  --------->TOE2(3)    ----------------->AGL3     <---------TOE1(3)  <----------DOF2     -   aaggctgactttggaccttaattactcttcatcgattccatttaatgatcaacatcctaattcaaggttttaccggtatatactttcatggtattatagg  8618800                   >>>>>>>>>RAP2.2                 <---------ARR11(3)                 --------->ARR11(3)                <---------GLK1(1)                     <----------DOF2             --------->ICU4         <-------TEIL                        <---------AHL20(2)               --------->TOE2(3) --------->YAB1 --------->GLK1(1)            --------->AHL20(2)       --------->At5g28300 ---------YAB1 --------->ARR11(3)        <---------YAB1              ----------->GT1 -------->ICU4 <---------ARR11(3)     <---------MYB52(1) <---------YAB1<---------MYB52(1)  ----------   tgattataagtttcatagatatctaaaaaaaaacattttcgttatatttaaattttcttttgatttttggaccgtgatttcgtcaatattagatggtttt  8618900                                                             ----------->RAV1(1)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    <---------GLK1(2)                                                  --------->LBD16                                                 <---------ANAC58                                                 <---------ANAC58                                         ----------->STF1   --------->ANAC46                                       ----------->TGA1   --------->ANAC46                                      <---------WOX13(1) <-----------------AGL1                   <--                             <---------ANAC58    <---------ANAC55(2)                              ---                             --------->YAB1      --------->ANAC55(2)                           ------                             <---------ANAC46    <---------ANAC46 <------ZmHOX2a(1)            <----- ->GT1       ----------->GT1 <---------ANAC58    <---------ANAC55(1)  --------->YAB1      --------->AHL20(2)   tttttgtataaaaaatagaaaaaattcactagcgtaattgaatgacgacttccgtattctccacaacaggaataagaaaatttagcaaaaaatcaaataa  8619000                                                                        --------->TOE2(3)                                                                  --------->YAB1                                                                  <---------ICU4                                                                 <---------YAB1                    -- -------ARR11(3)           <-----------HVH21                  --------->AHL20(2)                  --- ------>ARR11(3)       <---------AHL20(2)                   ----------->GT1<---------AHL20(2)    >>>> --->AHL20(2)         --------->AHL20(2)                  ---------->DOF2 --------->AHL20(2)  <------ ----AHL20(2)      <---------------AGL15          ----------->GT1--------->ICU4        <---------TOE2(3)   aatctttctcaatattgttttctattaaatgtcacaaaacaaatttgttaagagataaataaaagtaattataacataaaatttttgttaagaaatttta  8619100                   <---------AHL20(2)                     <---------ANAC58                  --------->YAB1                <---------TOE2(3)         --------->AHL20(2)                    ---------->DOF2       ----------->GT1                        --------->AHL20(2)      --------->DAG2                          <---------AHL20(2)     <------------CBF     ---------->DOF2   ----------->GT1     --------->WOX13(1)   ----------->GT1 ------->TOE2(3) --------->AHL20(2)      ------------>CBF <---------ANAC58                         *TSS ------>YAB1  --------->AHL20(2)        --------->ANAC58 <------NtERF2                        ------- >>>>>MYB98  --------->AHL20(2)         --------->ANAC58<---------MYB46(3)              --------->ZAT18 ---AHL20(2) <---------AHL20(2)   ---------->DOF2      --------->ALFIN1----------->GT1  <-------TEIL   acataaaaaaagtaaataaataaaaatgtaaatgaaaaaaggaagcaattaaagaaggtggctagcatgtaaattgttaagagaataatgtgcattagca  8619200                                                                    --------->HSFB2a(2)                                                                    <---------HSFB2a(2)                               <---------GLK1(2)               --------->HSFB2a(1)                               <---------ARR14(2)             <---------ARR14(2)                      <---------ARR14(2)                      --------->ARR11(3)                      --------->ARR14(2)                      --------->ARR14(2)       <-----------RAV1(1)     --------->ARR14(2)             <---------ARR11(3)       <---------MYB46(3) --------->At4g35610                <---------CCA1(2)     <---------At4g35610  --------->LBD16             --------->GLK1(2)     <---------ZAT2  <---------CCA1(2)               <---------ARR14(2)                           ---     --------->At4g35610  <---------At4g35610        --------->ARR14(2)           <----------ID1  --- ----->CBF       <---------ANAC55(2)                 <---------GLK1(2)     ------------------------>ANAC81   atttctgagctgttgcattacctatatccgctggattctctctctctctctctcagattcttcaaatcttccagtagaacaaaaaaaacaaaaacgaaaa  8619300       --------->HSFB2a(2)                                                                    -------       <---------HSFB2a(2)                                           <---------ANAC58        <-------   --------->ICU4                                    --------->AHL20(2)                      <------- ------>TOE2(3)                  <----------ID1      <---------AHL20(2)           <----------DOF2 <<< ------>TOE1(3)              ------->GAMYB       <---------GLK1(2)   <---------ANAC58        --------   ccctaatttttagaaattgtttcagtttcaacagaagaacaaaaacaactagaatttttttagttttttgtgcgtccatggcctctttagactcagattc  8619400                                                                                                   <-                                                                                                <----                                                                                    --------->KAN4(2)                                                                                   --------->KAN4(1)                                                                                   <---------HSFB2a(1)                                                                                   --------->HSFB2a(1)                                                                                   <---------KAN4(1)                                    <----------DOF2                ---------->DOF2 <----------TaMYB80                                    <---------------AGL15      <---------ZAT6     <---------ARR14(2)                                    --------------->AGL15     <------NtERF2       --------->ARR14(2) -->GLK1(2)                      ---------->ID1          --------->ALFIN1         ---------->TaMYB80 --ARR14(2)                  <----------DOF2            <-------MYC2              <---------KAN4(2)<- --GLK1(2)                  <---------ANAC58            <-------MYC3 <---------------AtSPL8     <---- <<<<<<TBF1                 <---------ANAC58            ------->MYC2 --------------->AtSPL3     ----- ->ARR14(2)           --------->MYB52(2) <---------LBD16------->MYC3 <---------TOE2(3)          -----   ttcttcttaattagtttttttggtttgtttgctttgttctttttgggggagaagagaacgtggcagagttaaaggtaccattcgaatattctaaaacacg  8619500                               <---------AHL20(2)                         --------->TOE2(3)   <---------ANAC58      <----------DOF2                                                 <---------YAB1   <---------ANAC58  <---------MYB59      <---------YAB1                              --------->ICU4 --------ANAC58     <---------ANAC58   <-----------------AGL1                  <---------ANAC46 ---MYC3            <---------ANAC58<----------DOF2                          --------->ZAT18 --------ANAC58   <-----------GT1<-----------GT1           --------->TOE2(3) --------->ZAT14    ----- ---MYC2      <---------AHL20(2)<-----------GT1      --------->YAB1          <---------ZAT14    ----- -->MYC3  <---------RVE1(1)<---------AHL20(2)       <---------ATHB12      <---------ANAC58    ------- -->MYC2 <---------ARR11(3)--------->AHL20(2)     --------->WOX13(1)      <---------ANAC58  <--------   ttcttgctcgtgatatttttttgcctactttaatttatctttttcttattggcaatcacaatctcaaatcgtttttgagtgctgtgtaattttgatgatc  8619600                                                                                                   <-   --------->AHL20(1)                                 <---------AHL20(1)                           --   <---------AHL20(1)                                 --------->AHL20(1)                           --   <---------AHL20(2)                                 --------->AHL20(2)                        <----   --------->AHL20(2)                --------->AHL20(2)    --------->ATHB12                     <----  --------->AHL20(2)    <---------ANAC55(1)       <---------CCA1(1)                           <------ ->ZmHOX2a(2)           <---------ANAC58          <---------RVE1(1)                           ------- ------>GT1             <---------ANAC58         --------->ARR11(3)                        --------->ANAC55(2) -->ARR11(3)            <---------ANAC46         <---------ARR11(3)   <---------AHL20(2)  <---------TOE2(3) -YAB1             <----------DOF2 --------->TOE2(3)  <---------AHL20(2)                  --------->MYB59   gtgaataaattggatttagttctttggcgtgttcttaacttaattactggagatattttattgatttgagaattaatagttaatgtgttatttaggtaac  8619700  Previous    Next  AGI:  At3g23870.1    Description:  permease-related. similar to permease-related [Arabidopsis thaliana] (TAIR:AT4G13800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43500.1); contains InterPro domain Protein of unknown function DUF803 (InterPro:IPR008521) Range:  from: 8619199    to: 8621914    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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