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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                      --------->ARR14(2)
                                                      <-----------ARR10
                                                   --------->AtMYB61
                                                   --------->MYB46(3)
                                                  --------->ANAC46
                                               --------->MYB46(3)
                                               ------>ZmHOX2a(2)
                                              <------ZmHOX2a(2)
                                             <---------ARR14(2)
                                             --------->ARR14(2)
                                             <---------TCP20      <---------MYB46(3)
                                           <---------MYB46(3)    --------->WRKY38(1)
                                           <---------ATERF1(1)  <---------MYB52(1)
                                         <---------LBD16       <-------GAMYB    <------ZmHOX2a(1)
                                       --------->DEAR3(1) ------>MYB46(1)    <------NtERF2
         --------->YAB1               <---------LBD16 --------->ARR11(3)   <---------DEAR3(1)
        <---------ATHB12             --------->MYB52(1) --------->AtMYB61  --------->ALFIN1
      --------->WOX13(1)           --------->MYB46(3) <---------ARR11(3)  <---------LBD16
 <<<<<<<<<TBF1            --------->MYB46(3)<------NtERF2 ------>MYB83 <-----------RAV1(2)     -----
 
attcttcttcaatcatacaagtatcaagaacaaacacaaacaccggcggatccaccagaccttccccgttggctacaggcggaggaagagtgtattcaac  8517400
                                                           <---------ANAC46
                                                    <---------ICU4 -------->HAHB4
                                                   --------->ICU4  --------->ATHB12
              --------->DAG2                     --------->YAB1    --------->YAB1
             ---------->DOF2                    <---------YAB1     <---------ICU4
        <---------TOE2(3)                     --------->ANAC55(2) <---------YAB1                 ---
  --------->ZAT18                             <---------ANAC55(2) <---------ATHB12            <-----
  <---------ZAT14                          <------ZmHOX2a(2)      --------->ICU4             -------
  <---------ZAT18        <------ZmHOX2a(1)<---------ARR11(3) <------NtERF2                   <------
  --------->ZAT14        =========================HOX2a_HOX2a<<<<<<<<<<E2Fb                  -------
 <---------ZAT6 <---------At4g35610       --------->ARR11(3)--------->LBD16         --------->MYB52(1)
---->ZAT6 <------ZmHOX2a(1)              --------->GLK1(1)<---------LBD16<---------At4g35610--------
 
agtagtgtactgaggataaagctcaccaggaagattagtctcagagatcacatgataatgaggcgggaaatgattacgctgataacaaaacggacagatc  8517500
                                                                           <------ZmHOX2a(1)
                                                                           =========================
                                                                         --------->ANAC58
                                                                     <---------ANAC58
                                                                     <---------ANAC55(2)
        --------->At5g28300                                          <---------ANAC46              <
       --------->LBD16                                              <-------TEIL                   -
      <---------ANAC46                                             <---------ANAC46               <-
     <---------LBD16                                      <------NtERF2  --------->ANAC58         --
  <----------DOF2                               <---------------AtSPL3  --------->SPL7          <---
------->DOF2                         --------->ANAC46     <---------At4g35610                  <----
-ZmHOX2a(2)                         <---------TOE2(3)     --------->At4g35610            --------->RAP2.6(3)
-->AGP1----------->GT1             <-----------GT1  <---------LBD16--------->ALFIN1     --------->ARR14(2)
---ARR14(2)             <---------ANAC58 <---------At4g35610    <---------DEAR3(1)      <---------ARR14(2)
-->ARR14(2)             <---------ANAC58 <------NtERF2--------->LBD16<---------ANAC58  --------->GLK1(1)
->At4g35610           <---------ANAC46   --------->At4g35610    --------->ALFIN1       <---------GLK1(1)
 
caaagctttgcggtgaaatcgacttgtgcgtaagcgtttaacgcagcggaacaagtccggcatcggagcggtgcgtaaggaagagtagggatatcggcat  8517600
      ------>ZmHOX2a(2)
     <------ZmHOX2a(2)
    <---------ARR14(2)
    --------->ARR14(2)
  --------->LBD16
 <---------TOE1(2)                 <---------ANAC55(2)
<---------LBD16                    --------->ANAC55(2)
<------NtERF2                      --------->ANAC46
--------->ATERF1(1)                --------->ANAC58
============HOX2a_HOX2a         <------ZmHOX2a(2)
---------RAP2.3(1)         --------->ALFIN1                                       <---------SPL7
----->NtERF2             --------->ALFIN1             <----------DOF2          <-----------HVH21
--------DEAR3(1)        <---------MYB46(3)          <---------At4g35610     <---------ANAC58
------->ETT(2)         <---------ANAC46    <---------ANAC58        <-----------RAV1(2)
--------HVH21         <------NtERF2--------->ANAC58 --------->At4g35610     <---------ANAC58
-------RAV1(1)      <---------DEAR3(1)     <---------ANAC58      ------>NtERF2--------->bZIP60(2)
 
gtcgccggatcggagaaatgcaagcggcgagtgggatcacgcatttgctagcttcagctttggaatgaggccagacgttccatgtcatacgaactccatc  8517700
              <---------ARR14(2)
              --------->ARR14(2)
          ------>ZmHOX2a(2)
         <------ZmHOX2a(2)
        --------->ARR11(3)
        <---------AGP1           --------->MYB52(2)                                             *TSS
        --------->ARR14(2)       <---------MYB46(3)                                             ----
        <---------ARR14(2) --------->LBD16             <------ZmHOX2a(2)               -------------
        <---------ARR11(3) ------>NtERF2             --------->At4g35610               ------>ZmHOX2a(1)
        --------->AGP1    --------->ANAC46        <------ZmHOX2a(2)                    <------------
     <---------HSFB2a(2) <---------LBD16 <---------HSFC1(2)                           --------->TOE2(3)
     --------->HSFB2a(2)<---------ATERF1(1)<----------DOF2                            --------->TOE1(3)
     --------->HSFC1(1)--------->ARR14(2)--------->HSFC1(2)   --------->GLK1(2)    <-----------GT1<-
 
gattccttctagatctgtattcgcagtctccgccattcgttggaagcttttagatcagatcagagaatttgagttttttttttttttttccttaatgaag  8517800
                                                 <---------WRKY18(1)
                                                --------->WRKY38(1)
                                                --------->WRKY12
                       <---------ANAC58        --------->DOF5.7(2)
      <---------ARR11(3)                      --------->TOE1(3)
      --------->ARR11(3)      <---------AHL20(2)--------->WRKY45
----------->GT1        <---------ANAC46     <---------TOE1(3)
----->ARR11(3)         <---------ANAC58--------->ZAT6                        <---------ANAC46
-->AGL15              ---------->ID1  --------->GLK1(1)                      <---------ANAC58
---AGL15--------->TOE2(3)<---------MYB52(1) <---------TOE2(3)                <---------ANAC58
-----------CBF    <----------DOF2   <------ZmHOX2a(1)             <-----------GT1        <---------ICU4
 
aaattgaaaaatctcaaaattctttggcgttattttttaggaactctaacgttgactgagtatcaaatatttctatttttgtgtgtctatactcatttca  8517900
                    ------>ZmHOX2a(2)
                    ----------->GT1
                  --------->ARR11(3)
                  <---------ARR11(3)
         ------>ZmHOX2a(2)                                                                      ----
      ====================HOX2a_HOX2a                             <---------At4g35610          <----
      =====================HOX2a_HOX2a                            --------->At4g35610          -----
      <------ZmHOX2a(1)            ----------->GT1 --------->ATHB12                           <-----
    --------->MYB59<------ZmHOX2a(2) <--------P<-----------GT1 ------>ZmHOX2a(1)             -------
 
ttttagttaggatcgaactgagatcgtagaaattgaaatggtaagtctaattactgatttgtattcctaagctcaaacttgagttttttttttctaaaat  8518000
                                                                                                   -
                                                                                                   -
                                                                                                   -
                                                                                                <---
                                                                                                ----
                                                                                                ----
                                                                                             -------
                                                                                          --------->ANAC58
                                                                                          --------->ANAC58
                                                                                        ---------->DOF2
                                                                                    ------>ZmHOX2a(2)
                                                                                   <------ZmHOX2a(2)
                                                                                  --------->ARR11(3)
                                                                                  <---------ARR11(3)
                                                                                  <---------ARR14(2)
                                                                                  --------->ARR14(2)
                                                                                  --------->ARR14(3)
                                                                                  <---------ARR14(3)
                                                                                 <---------HSFB2a(1)
                                                                            <---------HSFB2a(2)-----
                           <----------DOF2                                  --------->HSFC1(1) <----
                         <---------YAB1                                     <---------HSFC1(1)------
 <-----------GT1     <---------ARR11(3)                                  =================HOX2a_HOX2a
----->AHL20(2)       --------->ARR11(3)                                  ------>ZmHOX2a(1)--------->ANAC46
-----AHL20(2)       --------->YAB1                                       ==================HOX2a_HOX2a
---->AHL20(2)      <---------ATHB12         ------>MYB46(1)   --------->ZAT14    --------->HSFB2a(1)
----AHL20(1)       --------->ICU4           ------>MYB83      <---------ZAT14   ----------->ARR10  -
-->YAB1           <---------TOE1(2)    <-----------GT1      --------->ANAC46--------->HSFB2a(2)<----
 
aatttttcaaaactttgctcccatgatcatctttagccagtttcaccaacttatcttcatcacacttcacaatctccttcgagaagatccccaaagccac  8518100
         ----------->HVH21
        <-----------TGA1
        <-----------HVH21
     -------->P
     <---------At5g28300
 ------>MYB46(1)
 ------>MYB83
-------->DEAR3(1)
-------->DEAR4(1)
-------->DREB2C(2)
------ALFIN1       <---------HSFC1(2)                  ---------->DOF2
----->AtMYB61      --------->HSFC1(2)                --------->ANAC46
----->DEAR3(1)     --------->HSFB2a(1)               --------->ANAC58
-->RAP2.6(2)       <---------HSFB2a(1)               --------->ANAC58                              -
---->MYB46(3)     <-----------ARR10                --------->CCA1(2)                              --
-----MYB55(2)     ----------->ARR10              --------->YAB1                            <--------
>NtERF2--------->ANAC46   --------->ANAC46      <---------YAB1                       --------->TOE1(2)
------>GAMYB  <---------HSFB2a(2)        <---------TOE2(2)                           --------->TOE2(2)
-----ABI4(2)  --------->HSFB2a(2)        <---------TOE1(2)                         <-------TEIL   --
 
caccgacttaccgtcaccgagaagcttctccacaacgtttctcccatgtttatgatacgaaagctcgatgcaatgccattgaagcatacatgcgatggtg  8518200
          <-------GAMYB
         --------->MYB52(2)
-------->LBD16                                    ---------->DOF2                    <---------ZAT14
------->ANAC46                                <----------DOF2               --------->GLK1(1)
-AtMYB61 <---------MYB46(3)       >>>>>>>>>>>>>>>>>LFY                      <---------GLK1(1)     --
------->ANAC55(2)            <---------ALFIN1 --------------->AGL15   ----------------------->TaNAC69(2)
 
tccgtaatacgctcgttggaccaatgtgtttcccacttcccagtgtttcctttgaaagggagagagatttagtttttggatttcatacttcacttgagaa  8518300
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AGI:  At3g23660.1   
Description:  transport protein, putative. similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.2); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT4G14160.1); similar to transport protein, putative [Arabidopsis thaliana] (TAIR:AT1G05520.1); similar to At1g05520/T25N20_16 [Oryza sativa (japonica cultivar-group)] (GB:AAX96396.1); similar to hypothetical protein OsI_034747 [Oryza sativa (indica cultivar-group)] (GB:EAY80788.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66988.1); contains InterPro domain Sec23/Sec24 trunk region; (InterPro:IPR006896); contains InterPro domain Zinc finger, Sec23/S
Range:  from: 8513464    to: 8517797    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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