Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->ANAC58                                        ------>ZmHOX2a(2)            --------->ANAC46                                              <------ZmHOX2a(2)            --------->ANAC58                                             --------->ARR14(3)          <-----------GT1                                                <---------ARR11(3)         <-------TEIL                                                    <---------ARR14(3)       <---------GLK1(2)        --------->LBD16                          --------->ARR11(3)       <---------ARR14(2)   <---------ARR11(3)                           --------->ARR14(2)       --------->ARR14(2)   --------->ARR11(3)                           <---------ARR14(2)   <---------At4g35610      <---------ARR14(2)                --------->GLK1(1) ------NtERF2      --------->ANAC58   --------->AHL20(1)     <---------ARR14(2) ----RAP2.6(2) --------->AtMYB61------>ZmHOX2a(1)            --------->ARR14(2)  --------->ANAC46   < ----RAV1(1)--------->ANAC58--------->ARR14(2)  --------->ATHB12        <------ZmHOX2a(1)       -----   gctgcatcagattcacaccacaagacccaaaatcctgaaatatgttatcttcatttgtttgcatatatccataaggatcttctactccattgctacagaa  8284700                                ------->GAMYB                               --------->MYB46(3)                                          >>>>>>>>>SARD1                               <---------MYB52(2)                                          >>>>>>>>>CBP60g                             --------->YAB1                                --------------->AGL15                             <---------ICU4                                <---------------AGL15                             --------->MYB52(1)                           <-----------------AGL2 ----------->GT1          --------->YAB1                 --------->YAB1   <-----------------AGL3 ---------TOE2(3)      ----------->RAV1(1)         --------->YAB1         ----------------->AGL2   -- ---->GLK1(2)         --------->MYB46(3)       <----------DOF2       <----------DOF2 <---------WOX13(1)   tcaaggtaacaacaatctccatcaacaacaataacgaccgctagaaaaacttttcatattcaaaatcgaaacttttgctaaaattggattgaaatttgga  8284800                                                                                              <------                                                                                             <-------                                                                                           --------->YAB1                                 ----------->RAV1(1)                                     <---------ARR11(3)                      --------->DAG2             --------->YAB1            ---------->DOF2<------ZmHOX2a(2)                     ---------->DOF2             --------->AHL20(2)      ---------->DOF2 --------->ARR11(3) --------->GT1      ---------->DOF2           --------->YAB1--------->TOE2(3)          ----------->ARR10   attgttaagaaacccaaataacaaaaggcacaatacaacacaattcaacaataaaaatcaaacctttgatcaaaacaaagagcagcgagaagatcatcat  8284900                                                             <---------ARR11(3)                                                             --------->GLK1(2)                                                             --------->ARR11(3)                     --------->At4g35610           <---------ARR14(2)               <-------TEIL                        --------->GLK1(2)      <---------WOX13(1)                           --------->ARR14(2)      --------->ANAC46 ---ICU4  <---------WOX13(1)                      <---------GLK1(2)        --------->ANAC58 --YAB1 --------->ATHB12 >>>>>>>>>TBF1   <XXXXXXXXXXXXXXXXXXXXMIR413       --------->ANAC58 ---------   cgtcttcgattgatggatacatcagaagaagaacagagaatgcagaacgagagaatctgcaaaaatctgtctcaaacacacaaatactgtattccctaga  8285000                                               --------->CCA1(2)                        --------->ATHB12      --------->ARR11(1)                  <----------DOF2             <---------ARR11(3)               --------->ARR11(3)          <---------TOE2(3)               <---------ARR11(3)         ---------->DOF2                      --------->AHL20(2)              <---------CCA1(2)      --------->AHL20(1)                        <---------AHL20(2)          --------->CCA1(2)        --------->AHL20(1)                         --------->AHL20(2)         <---------ARR11(3)        <---------AHL20(1)                      ------>MYB46(1)      <------ZmHOX2a(1)<---------YAB1<---------AHL20(1)               <-----------GT1 <---------ANAC46 >LBD16  --------->ARR11(3)       --------->AHL20(2)    --------->GLK1(2)  ------>MYB83 *TSS   aaatttgaggagatatatatcttttgttattggaaaatatatattaaagatttgagagaattttggaattttaaaccaaattttattctcgtgaaaaaaa  8285100                                                          --------->AHL20(2)                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                  --------->AHL20(2)                                                  --------->AHL20(1)                                                  <---------AHL20(2)                                                 <---------AHL20(2)                         --------->ARR14(2)   --------->AHL20(1)                         <---------GLK1(2)    <---------AHL20(1)                  --------->ALFIN1                         <---------ARR14(2)   --------->AHL20(2)                <-----------RAV1(1)                    --------->GLK1(2)         <---------AHL20(2)            --------->AHL20(2)               --------->ANAC58          <---------YAB1<---------AHL20(2)   --------->YAB1               --------->ANAC58        <---------ZAT6 <---------AHL20(1) --------->YAB1 <----------DOF2           <-----------GT1--------->GLK1(2)--------->YAB1 <---------AHL20(2)<---------AHL20(2)         <---------AHL20(2)     <-----------TBP  --------->AHL20(2) ----------->GT1  <---------PCF2   acatatcgaattttaacaagaaaatcggaatcggttttatagtattaataaattaattaattttttaaaaatgtataataatatgtggggcttttagaga  8285200                                                                                         <---------ANAC58                                                                                         <---------ANAC55(2)                                                                                         <---------ANAC58                                                                                         <---------ANAC55(1)                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                --------->LBD16                                                                                <---------ORA47(2)                                                                               --------->ALFIN1                                                                               <---------ANAC58                                                          <---------PCF5    --------->DAG2                                                     --------->ALFIN1      ---------->DOF2    <------                         <------MYB83              <---------ANAC46  --------------->AGL15    <------                         <------MYB46(1)    --------->GLK1(2)   <----------DOF2<---------ANAC58 <----               --------->YAB1--------->WRKY18(1) <---------ZAT14<---------DAG2 <---------DEAR3(1) --------->ANAC46      <--------P    <---------ZAT14 <---------ZAT6 --------->TOE2(3)<----------DOF2 --------->ANAC58    <---------MYB46(3)    <---------GLK1(2) <---------ALFIN1 <---------LBD16 <------ --------->ANAC58    --------->ATHB12--------->ZAT14 <-----------RAV1(1)  ---------->DOF2--------->ANAC55(2)   gccacgcatttggcaaatgaaaatggttggggtcaagagtgaagagaatcgttcagtgttggaccacttttcttaaaaaaggcggggcattacgtttcgt  8285300       <---------MYB46(3)                                <---------ICU4 ---ANAC46                                         --------->TOE2(3) ---ANAC58                                         --------->YAB1       <---------REM1(1)   <-------MYC3 -----MYB52(1)                <---------AHL20(2) <---------ARR11(3)    <---------TOE2(3)    ------->MYC3 ---ANAC58                 ----------->GT1  --------->ZAT18     <---------AtLEC2         --------->ANAC46   tttttgtattggttcgatttgtttatgtatagttaatggtagcatttgcactatcttaataagtgtgcatgttgatgtagcatcacattacacacatgtc  8285400                                           --------->ARR14(2)                                           <---------ARR14(2)                             <-----------HVH21                            --------->bZIP60(2)                      --------->STY1(2) <---------ANAC58      <---------GLK1(2)     --------->ANAC46         <----------DOF2                --------->YAB1<-- <----------DOF2 --------->ZAT6         <---------ANAC58                       <---------GLK1(2) <--- --------->TOE2(3)    <---------STY1(2) <---------ANAC46       <------ZmHOX2a(1)   <---------YAB1----   taactttagattatggtgaacactagctactcgtcacatatgtcgtatatgaagtctttgggataggattgaattgatgcagattatcatgttctaaaat  8285500        <---------ICU4        --------->YAB1     <---------ICU4     --------->YAB1    --------->ICU4    <---------YAB1  --------->YAB1                                                                         --------->YAB1 <---------ATHB12                                     <---------YAB1                   --------->AHL20(2) -------AHL20(2) ------>ZmHOX2a(2)       <-----------GT1                    --------->ANAC58 ------AHL20(2)--------->ARR11(3)    <---------AHL20(1)                     ----------->GT1 ----->AHL20(2)<---------ARR11(3)    --------->AHL20(1)--------->YAB1       --------->ANAC58      <--   taaatcataatcatgttgatctcatagtattgtatgtaatatataacttatttcttatgatgttcacaaaattgtctcaagtaaaacaaaataatagttt  8285600  Previous    Next  AGI:  At3g23210.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G14410.1); similar to unknown [Picea sitchensis] (GB:ABK23190.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 8283097    to: 8285088    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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